RNA–Protein interactions for RNA: YDL230W

PTP1, Transcript of Phosphotyrosine-specific protein phosphatase, yeastyeast

Gene PTP1, Length 1,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTP1YDL230W NMA111P53920 997 aa12.81□□□□□ -0.36
PTP1YDL230W MUB1Q03162 620 aa12.81□□□□□ -0.36
PTP1YDL230W CMS1Q07897 291 aaKnown RBP12.81□□□□□ -0.36
PTP1YDL230W PRP4P20053 465 aaKnown RBP12.8□□□□□ -0.36
PTP1YDL230W SPT5P27692 1063 aaKnown RBP12.8□□□□□ -0.36
PTP1YDL230W OXP1P28273 1286 aa12.8□□□□□ -0.36
PTP1YDL230W PDB1P32473 366 aaKnown RBP12.8□□□□□ -0.36
PTP1YDL230W HEK2P38199 381 aaKnown RBP RIP-Chip data12.8□□□□□ -0.36not detected
PTP1YDL230W OAF1P39720 1047 aaPredicted RBP12.8□□□□□ -0.36
PTP1YDL230W YGR283CP53336 341 aaPredicted RBP12.8□□□□□ -0.36
PTP1YDL230W KTR5P53966 522 aaPredicted RBP12.8□□□□□ -0.36
PTP1YDL230W SUB1P54000 292 aaKnown RBP12.8□□□□□ -0.36
PTP1YDL230W ADE13Q05911 482 aaKnown RBP12.8□□□□□ -0.36
PTP1YDL230W VPS5Q92331 675 aa12.8□□□□□ -0.36
PTP1YDL230W TEF1P02994 458 aaKnown RBP12.79□□□□□ -0.36
PTP1YDL230W CDC20P26309 610 aa12.79□□□□□ -0.36
PTP1YDL230W URA7P28274 579 aaKnown RBP12.79□□□□□ -0.36
PTP1YDL230W FRE1P32791 686 aa12.79□□□□□ -0.36
PTP1YDL230W UBX7P38349 436 aa12.79□□□□□ -0.36
PTP1YDL230W NMD3P38861 518 aaKnown RBP12.79□□□□□ -0.36
PTP1YDL230W SLG1P54867 378 aa12.79□□□□□ -0.36
PTP1YDL230W BET4Q00618 327 aa12.79□□□□□ -0.36
PTP1YDL230W RKM2Q03942 479 aa12.79□□□□□ -0.36
PTP1YDL230W AVL9Q12500 764 aa12.79□□□□□ -0.36
PTP1YDL230W RTP1Q12751 981 aa12.79□□□□□ -0.36
PTP1YDL230W ILS1P09436 1072 aaKnown RBP12.78□□□□□ -0.36
PTP1YDL230W LRE1P25579 583 aaKnown RBP12.78□□□□□ -0.36
PTP1YDL230W ERP2P39704 215 aa12.78□□□□□ -0.36
PTP1YDL230W DSE1P40077 573 aa12.78□□□□□ -0.36
PTP1YDL230W EMW1P42842 904 aaKnown RBP12.78□□□□□ -0.36
PTP1YDL230W SAE2P46946 345 aa12.78□□□□□ -0.36
PTP1YDL230W PFD1P46988 109 aa12.78□□□□□ -0.36
PTP1YDL230W ISM1P48526 1002 aa12.78□□□□□ -0.36
PTP1YDL230W YNL247WP53852 767 aaKnown RBP12.78□□□□□ -0.36
PTP1YDL230W INA17Q02888 182 aa12.78□□□□□ -0.36
PTP1YDL230W YML119WQ03208 357 aa12.78□□□□□ -0.36
PTP1YDL230W SHE9Q04172 456 aa12.78□□□□□ -0.36
PTP1YDL230W VHS3Q08438 674 aa12.78□□□□□ -0.36
PTP1YDL230W DRE2P36152 348 aa12.77□□□□□ -0.37
PTP1YDL230W HSL7P38274 827 aa12.77□□□□□ -0.37
PTP1YDL230W SCC4P40090 624 aa12.77□□□□□ -0.37
PTP1YDL230W TAH11P47112 604 aa12.77□□□□□ -0.37
PTP1YDL230W NCS6P53088 359 aa12.77□□□□□ -0.37
PTP1YDL230W TEP1P53916 434 aa12.77□□□□□ -0.37
PTP1YDL230W YNL108CP53929 270 aa12.77□□□□□ -0.37
PTP1YDL230W VPS16Q03308 798 aa12.77□□□□□ -0.37
PTP1YDL230W SSC1P0CS90 654 aaKnown RBP12.76□□□□□ -0.37
PTP1YDL230W KIP2P28743 706 aa12.76□□□□□ -0.37
PTP1YDL230W DUR3P33413 735 aa12.76□□□□□ -0.37
PTP1YDL230W SET3P36124 751 aa12.76□□□□□ -0.37
PTP1YDL230W SIP5P40210 489 aaKnown RBP12.76□□□□□ -0.37
PTP1YDL230W PFK26P40433 827 aaKnown RBP12.76□□□□□ -0.37
PTP1YDL230W PRY3P47033 881 aa12.76□□□□□ -0.37
PTP1YDL230W YJR107WP47145 328 aa12.76□□□□□ -0.37
PTP1YDL230W YPL109CQ02981 657 aa12.76□□□□□ -0.37
PTP1YDL230W BUD22Q04347 519 aaKnown RBP12.76□□□□□ -0.37
PTP1YDL230W THI21Q08975 551 aa12.76□□□□□ -0.37
PTP1YDL230W ICL2Q12031 575 aa12.76□□□□□ -0.37
PTP1YDL230W IZH4Q99393 312 aa12.76□□□□□ -0.37
PTP1YDL230W IMA3P0CW40 589 aa12.75□□□□□ -0.37
PTP1YDL230W IMA4P0CW41 589 aa12.75□□□□□ -0.37
PTP1YDL230W NIP1P32497 812 aaKnown RBP12.75□□□□□ -0.37
PTP1YDL230W ETR1P38071 380 aa12.75□□□□□ -0.37
PTP1YDL230W LIN1P38852 340 aaPredicted RBP12.75□□□□□ -0.37
PTP1YDL230W CKB2P38930 258 aa12.75□□□□□ -0.37
PTP1YDL230W TMA22P47089 198 aaPredicted RBP12.75□□□□□ -0.37
PTP1YDL230W YET3Q07451 203 aa12.75□□□□□ -0.37
PTP1YDL230W IMA2Q08295 589 aa12.75□□□□□ -0.37
PTP1YDL230W YLR053CQ12026 108 aa12.75□□□□□ -0.37
PTP1YDL230W YOR022CQ12204 715 aa12.75□□□□□ -0.37
PTP1YDL230W DIA4P38705 446 aaPredicted RBP12.74□□□□□ -0.37
PTP1YDL230W YAP1801P38856 637 aa12.74□□□□□ -0.37
PTP1YDL230W LYS9P38999 446 aa12.74□□□□□ -0.37
PTP1YDL230W AZR1P50080 613 aa12.74□□□□□ -0.37
PTP1YDL230W BIO4P53630 237 aa12.74□□□□□ -0.37
PTP1YDL230W NOP13P53883 403 aaKnown RBP RIP-Chip data12.74□□□□□ -0.37not detected
PTP1YDL230W YNL134CP53912 376 aaKnown RBP12.74□□□□□ -0.37
PTP1YDL230W YLR177WQ06251 628 aa12.74□□□□□ -0.37
PTP1YDL230W MAG2Q06436 670 aaKnown RBP12.74□□□□□ -0.37
PTP1YDL230W YLL056CQ12177 298 aa12.74□□□□□ -0.37
PTP1YDL230W SUT2Q12286 268 aa12.74□□□□□ -0.37
PTP1YDL230W YPK1P12688 680 aaKnown RBP12.73□□□□□ -0.37
PTP1YDL230W GAL11P19659 1081 aa12.73□□□□□ -0.37
PTP1YDL230W RSA4P25382 515 aaKnown RBP12.73□□□□□ -0.37
PTP1YDL230W HEL1P36113 551 aa12.73□□□□□ -0.37
PTP1YDL230W ETP1P38748 585 aaKnown RBP12.73□□□□□ -0.37
PTP1YDL230W TVP23P38962 199 aa12.73□□□□□ -0.37
PTP1YDL230W AFG3P39925 761 aa12.73□□□□□ -0.37
PTP1YDL230W MAF1P41910 395 aa12.73□□□□□ -0.37
PTP1YDL230W RRT5P43607 289 aa12.73□□□□□ -0.37
PTP1YDL230W YMR160WQ03823 816 aa12.73□□□□□ -0.37
PTP1YDL230W MSH6Q03834 1242 aa12.73□□□□□ -0.37
PTP1YDL230W FMP25Q08023 583 aa12.73□□□□□ -0.37
PTP1YDL230W THI20Q08224 551 aa12.73□□□□□ -0.37
PTP1YDL230W ALR1Q08269 859 aa12.73□□□□□ -0.37
PTP1YDL230W DNL4Q08387 944 aaPredicted RBP12.73□□□□□ -0.37
PTP1YDL230W AAD3P25612 363 aa12.72□□□□□ -0.37
PTP1YDL230W MCM5P29496 775 aaKnown RBP12.72□□□□□ -0.37
PTP1YDL230W MVD1P32377 396 aaKnown RBP12.72□□□□□ -0.37
PTP1YDL230W GCV2P49095 1034 aa12.72□□□□□ -0.37
Retrieved 100 of 5,963 RNA–protein pairs in 63.1 ms