RNA–Protein interactions for RNA: YDL078C

MDH3, Transcript of Peroxisomal malate dehydrogenase, yeastyeast

Gene MDH3, Length 1,032 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MDH3YDL078C RAM1P22007 431 aa6.06□□□□□ -1.44
MDH3YDL078C DAL2P25335 343 aa6.06□□□□□ -1.44
MDH3YDL078C PHO87P25360 923 aa6.06□□□□□ -1.44
MDH3YDL078C VBA3P25594 458 aa6.06□□□□□ -1.44
MDH3YDL078C COY1P34237 679 aa6.06□□□□□ -1.44
MDH3YDL078C VBA5P36172 582 aa6.06□□□□□ -1.44
MDH3YDL078C PSY4P38193 441 aa6.06□□□□□ -1.44
MDH3YDL078C RAD55P38953 406 aa6.06□□□□□ -1.44
MDH3YDL078C SDS3P40505 327 aa6.06□□□□□ -1.44
MDH3YDL078C YGL036WP53185 909 aaPredicted RBP6.06□□□□□ -1.44
MDH3YDL078C YNL247WP53852 767 aaKnown RBP6.06□□□□□ -1.44
MDH3YDL078C ESBP6P53918 673 aa6.06□□□□□ -1.44
MDH3YDL078C RRB1Q04225 511 aaKnown RBP6.06□□□□□ -1.44
MDH3YDL078C TSR1Q07381 788 aaKnown RBP6.06□□□□□ -1.44
MDH3YDL078C IRC10Q08118 586 aa6.06□□□□□ -1.44
MDH3YDL078C GYP1Q08484 637 aa6.06□□□□□ -1.44
MDH3YDL078C TMA16Q08687 178 aa6.06□□□□□ -1.44
MDH3YDL078C YPR015CQ12531 247 aa6.06□□□□□ -1.44
MDH3YDL078C VPS5Q92331 675 aa6.06□□□□□ -1.44
MDH3YDL078C ENO1P00924 437 aaKnown RBP6.05□□□□□ -1.44
MDH3YDL078C MTF1P14908 341 aaKnown RBP6.05□□□□□ -1.44
MDH3YDL078C MRPS28P21771 286 aa6.05□□□□□ -1.44
MDH3YDL078C PUP3P25451 205 aaKnown RBP6.05□□□□□ -1.44
MDH3YDL078C LRE1P25579 583 aaKnown RBP6.05□□□□□ -1.44
MDH3YDL078C MSH1P25846 959 aa6.05□□□□□ -1.44
MDH3YDL078C NIP100P33420 868 aa6.05□□□□□ -1.44
MDH3YDL078C YKL097CP34245 136 aa6.05□□□□□ -1.44
MDH3YDL078C PIM1P36775 1133 aa6.05□□□□□ -1.44
MDH3YDL078C YBR056WP38081 501 aa6.05□□□□□ -1.44
MDH3YDL078C YMC2P38087 329 aa6.05□□□□□ -1.44
MDH3YDL078C OLA1P38219 394 aaKnown RBP6.05□□□□□ -1.44
MDH3YDL078C SIF2P38262 535 aa6.05□□□□□ -1.44
MDH3YDL078C DYS1P38791 387 aa6.05□□□□□ -1.44
MDH3YDL078C SFB3P38810 929 aa6.05□□□□□ -1.44
MDH3YDL078C MPH1P40562 993 aa6.05□□□□□ -1.44
MDH3YDL078C STR2P47164 639 aa6.05□□□□□ -1.44
MDH3YDL078C SHE4P51534 789 aa6.05□□□□□ -1.44
MDH3YDL078C MND1P53102 219 aa6.05□□□□□ -1.44
MDH3YDL078C UTP8P53276 713 aaKnown RBP6.05□□□□□ -1.44
MDH3YDL078C CEG1Q01159 459 aaPredicted RBP6.05□□□□□ -1.44
MDH3YDL078C HER2Q03557 464 aa6.05□□□□□ -1.44
MDH3YDL078C FMP25Q08023 583 aa6.05□□□□□ -1.44
MDH3YDL078C APC5Q08683 685 aa6.05□□□□□ -1.44
MDH3YDL078C TRE1Q08919 783 aa6.05□□□□□ -1.44
MDH3YDL078C SLP1Q12232 587 aa6.05□□□□□ -1.44
MDH3YDL078C NKP1Q12493 238 aa6.05□□□□□ -1.44
MDH3YDL078C RPS9AO13516 197 aaKnown RBP6.04□□□□□ -1.44
MDH3YDL078C CDC33P07260 213 aaKnown RBP6.04□□□□□ -1.44
MDH3YDL078C YER152CP10356 443 aa6.04□□□□□ -1.44
MDH3YDL078C SAT4P25333 603 aaKnown RBP6.04□□□□□ -1.44
MDH3YDL078C RAD16P31244 790 aa6.04□□□□□ -1.44
MDH3YDL078C GCD6P32501 712 aaKnown RBP6.04□□□□□ -1.44
MDH3YDL078C NUF2P33895 451 aa6.04□□□□□ -1.44
MDH3YDL078C TIF3P34167 436 aaKnown RBP6.04□□□□□ -1.44
MDH3YDL078C YKR051WP36142 418 aa6.04□□□□□ -1.44
MDH3YDL078C IES1P43579 692 aa6.04□□□□□ -1.44
MDH3YDL078C ZAP1P47043 880 aa6.04□□□□□ -1.44
MDH3YDL078C SYH1Q02875 849 aaKnown RBP6.04□□□□□ -1.44
MDH3YDL078C SPO19Q03029 223 aa6.04□□□□□ -1.44
MDH3YDL078C YPR078CQ06813 372 aa6.04□□□□□ -1.44
MDH3YDL078C CWC2Q12046 339 aaPredicted RBP6.04□□□□□ -1.44
MDH3YDL078C NBP2Q12163 236 aa6.04□□□□□ -1.44
MDH3YDL078C JIP3O13555 125 aa6.03□□□□□ -1.44
MDH3YDL078C TRP2P00899 507 aaKnown RBP6.03□□□□□ -1.44
MDH3YDL078C PPR1P07272 904 aaPredicted RBP6.03□□□□□ -1.44
MDH3YDL078C RPS6AP0CX37 236 aaKnown RBP6.03□□□□□ -1.44
MDH3YDL078C RPS6BP0CX38 236 aaPredicted RBP6.03□□□□□ -1.44
MDH3YDL078C CYC8P14922 966 aa6.03□□□□□ -1.44
MDH3YDL078C RPL5P26321 297 aaKnown RBP6.03□□□□□ -1.44
MDH3YDL078C ISF1P32488 338 aa6.03□□□□□ -1.44
MDH3YDL078C SMC1P32908 1225 aa6.03□□□□□ -1.44
MDH3YDL078C XRS2P33301 854 aa6.03□□□□□ -1.44
MDH3YDL078C RPC37P36121 282 aa6.03□□□□□ -1.44
MDH3YDL078C FHL1P39521 936 aa6.03□□□□□ -1.44
MDH3YDL078C GUF1P46943 645 aa6.03□□□□□ -1.44
MDH3YDL078C PFD1P46988 109 aa6.03□□□□□ -1.44
MDH3YDL078C RIM21P48565 533 aa6.03□□□□□ -1.44
MDH3YDL078C BIO5P53744 561 aaKnown RBP6.03□□□□□ -1.44
MDH3YDL078C GPD1Q00055 391 aaKnown RBP6.03□□□□□ -1.44
MDH3YDL078C MTD1Q02046 320 aaKnown RBP6.03□□□□□ -1.44
MDH3YDL078C GCN5Q03330 439 aa6.03□□□□□ -1.44
MDH3YDL078C MRX10Q05648 414 aa6.03□□□□□ -1.44
MDH3YDL078C YPQ1Q12010 308 aa6.03□□□□□ -1.44
MDH3YDL078C NDJ1Q12366 352 aa6.03□□□□□ -1.44
MDH3YDL078C RPS3P05750 240 aaKnown RBP6.02□□□□□ -1.45
MDH3YDL078C HIS5P07172 385 aa6.02□□□□□ -1.45
MDH3YDL078C SGF29P25554 259 aa6.02□□□□□ -1.45
MDH3YDL078C SEC65P29478 273 aa6.02□□□□□ -1.45
MDH3YDL078C GCD11P32481 527 aaKnown RBP6.02□□□□□ -1.45
MDH3YDL078C DSS4P32601 143 aa6.02□□□□□ -1.45
MDH3YDL078C SHM1P37292 490 aaPredicted RBP6.02□□□□□ -1.45
MDH3YDL078C DUG2P38149 878 aa6.02□□□□□ -1.45
MDH3YDL078C YBR225WP38321 900 aa6.02□□□□□ -1.45
MDH3YDL078C NUP60P39705 539 aa6.02□□□□□ -1.45
MDH3YDL078C SIT1P39980 628 aa6.02□□□□□ -1.45
MDH3YDL078C AVT2P39981 480 aa6.02□□□□□ -1.45
MDH3YDL078C SEC27P41811 889 aaKnown RBP6.02□□□□□ -1.45
MDH3YDL078C HOP2P53187 214 aa6.02□□□□□ -1.45
MDH3YDL078C IST1P53843 298 aaPredicted RBP6.02□□□□□ -1.45
MDH3YDL078C SFB2P53953 876 aa6.02□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 79.9 ms