RNA–Protein interactions for RNA: YOL122C

SMF1, Transcript of Divalent metal ion transporter, yeast

Gene SMF1, Length 1,728 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMF1	YOL122C	NNF2	P53253	936 aa		4.89	□□□□□ -1.63
SMF1	YOL122C	ORC3	P54790	616 aa		4.89	□□□□□ -1.63
SMF1	YOL122C	ARP7	Q12406	477 aa		4.89	□□□□□ -1.63
SMF1	YOL122C	SED4	P25365	1065 aa		4.89	□□□□□ -1.63
SMF1	YOL122C	SLU7	Q02775	382 aa	Known RBP	4.89	□□□□□ -1.63
SMF1	YOL122C	MCH5	Q08777	521 aa		4.89	□□□□□ -1.63
SMF1	YOL122C	CDC6	P09119	513 aa		4.88	□□□□□ -1.63
SMF1	YOL122C	PYC1	P11154	1178 aa	Known RBP	4.88	□□□□□ -1.63
SMF1	YOL122C	GFA1	P14742	717 aa	Known RBP	4.88	□□□□□ -1.63
SMF1	YOL122C	MSH1	P25846	959 aa		4.88	□□□□□ -1.63
SMF1	YOL122C	DGR2	P32330	852 aa		4.88	□□□□□ -1.63
SMF1	YOL122C	MCM10	P32354	571 aa		4.88	□□□□□ -1.63
SMF1	YOL122C	SHM2	P37291	469 aa	Known RBP	4.88	□□□□□ -1.63
SMF1	YOL122C	APM3	P38153	483 aa		4.88	□□□□□ -1.63
SMF1	YOL122C	MET12	P46151	657 aa		4.88	□□□□□ -1.63
SMF1	YOL122C	PRP31	P49704	494 aa	Predicted RBP	4.88	□□□□□ -1.63
SMF1	YOL122C	EXG2	P52911	562 aa		4.88	□□□□□ -1.63
SMF1	YOL122C	NCS6	P53088	359 aa		4.88	□□□□□ -1.63
SMF1	YOL122C	VPS36	Q06696	566 aa		4.88	□□□□□ -1.63
SMF1	YOL122C	PSF3	Q12146	194 aa		4.88	□□□□□ -1.63
SMF1	YOL122C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
SMF1	YOL122C	RPN12	P32496	274 aa		4.87	□□□□□ -1.63
SMF1	YOL122C	TGL1	P34163	548 aa		4.87	□□□□□ -1.63
SMF1	YOL122C	SWD1	P39706	426 aa		4.87	□□□□□ -1.63
SMF1	YOL122C	MAD2	P40958	196 aa		4.87	□□□□□ -1.63
SMF1	YOL122C	ARG5,6	Q01217	863 aa		4.87	□□□□□ -1.63
SMF1	YOL122C	VHS3	Q08438	674 aa		4.87	□□□□□ -1.63
SMF1	YOL122C	HMI1	Q12039	706 aa		4.87	□□□□□ -1.63
SMF1	YOL122C	HIF1	Q12373	385 aa		4.87	□□□□□ -1.63
SMF1	YOL122C	YOL087C	Q99247	1116 aa		4.87	□□□□□ -1.63
SMF1	YOL122C	YLR415C	O13578	112 aa		4.86	□□□□□ -1.63
SMF1	YOL122C	SIC1	P38634	284 aa		4.86	□□□□□ -1.63
SMF1	YOL122C	YHR112C	P38716	378 aa		4.86	□□□□□ -1.63
SMF1	YOL122C	BUD8	P41698	603 aa		4.86	□□□□□ -1.63
SMF1	YOL122C	MNT2	P53059	558 aa		4.86	□□□□□ -1.63
SMF1	YOL122C	MRPS35	P53292	345 aa		4.86	□□□□□ -1.63
SMF1	YOL122C	ARC35	P53731	342 aa	Known RBP	4.86	□□□□□ -1.63
SMF1	YOL122C	YSH1	Q06224	779 aa	Predicted RBP	4.86	□□□□□ -1.63
SMF1	YOL122C	DIN7	Q12086	430 aa		4.86	□□□□□ -1.63
SMF1	YOL122C	SPT6	P23615	1451 aa	Known RBP	4.86	□□□□□ -1.63
SMF1	YOL122C	HIS5	P07172	385 aa		4.86	□□□□□ -1.63
SMF1	YOL122C	FRS1	P15624	595 aa	Known RBP	4.86	□□□□□ -1.63
SMF1	YOL122C	ERG6	P25087	383 aa	Known RBP	4.86	□□□□□ -1.63
SMF1	YOL122C	EMC1	P25574	760 aa		4.86	□□□□□ -1.63
SMF1	YOL122C	PET127	P32606	800 aa		4.86	□□□□□ -1.63
SMF1	YOL122C	TOA1	P32773	286 aa		4.86	□□□□□ -1.63
SMF1	YOL122C	MPE1	P35728	441 aa	Known RBP	4.86	□□□□□ -1.63
SMF1	YOL122C	TAF1	P46677	1066 aa		4.86	□□□□□ -1.63
SMF1	YOL122C	IML2	P47031	731 aa		4.86	□□□□□ -1.63
SMF1	YOL122C	SMC3	P47037	1230 aa		4.86	□□□□□ -1.63
SMF1	YOL122C	TLG1	Q03322	224 aa		4.86	□□□□□ -1.63
SMF1	YOL122C	HMO1	Q03973	246 aa	Known RBP	4.86	□□□□□ -1.63
SMF1	YOL122C	BLS1	Q06071	122 aa		4.86	□□□□□ -1.63
SMF1	YOL122C	SGD1	Q06132	899 aa		4.86	□□□□□ -1.63
SMF1	YOL122C	MMS22	Q06164	1454 aa		4.86	□□□□□ -1.63
SMF1	YOL122C	THO2	P53552	1597 aa	Known RBP	4.85	□□□□□ -1.63
SMF1	YOL122C	CBP3	P21560	335 aa		4.85	□□□□□ -1.63
SMF1	YOL122C	MTC7	P32633	139 aa		4.85	□□□□□ -1.63
SMF1	YOL122C	YPT7	P32939	208 aa		4.85	□□□□□ -1.63
SMF1	YOL122C	CHA4	P43634	648 aa		4.85	□□□□□ -1.63
SMF1	YOL122C	BNA1	P47096	177 aa		4.85	□□□□□ -1.63
SMF1	YOL122C	PRP3	Q03338	469 aa	Predicted RBP	4.85	□□□□□ -1.63
SMF1	YOL122C	PKH1	Q03407	766 aa		4.85	□□□□□ -1.63
SMF1	YOL122C	ENT2	Q05785	613 aa		4.85	□□□□□ -1.63
SMF1	YOL122C	RRI2	Q12348	645 aa		4.85	□□□□□ -1.63
SMF1	YOL122C	SWM1	Q12379	170 aa		4.85	□□□□□ -1.63
SMF1	YOL122C	NOP58	Q12499	511 aa	Known RBP	4.85	□□□□□ -1.63
SMF1	YOL122C	VAS1	P07806	1104 aa	Known RBP	4.84	□□□□□ -1.63
SMF1	YOL122C	NCP1	P16603	691 aa	Known RBP	4.84	□□□□□ -1.63
SMF1	YOL122C	LTV1	P34078	463 aa		4.84	□□□□□ -1.63
SMF1	YOL122C	LRG1	P35688	1017 aa		4.84	□□□□□ -1.63
SMF1	YOL122C	SDS22	P36047	338 aa		4.84	□□□□□ -1.63
SMF1	YOL122C	YHR033W	P38690	423 aa		4.84	□□□□□ -1.63
SMF1	YOL122C	LAM1	P38851	1228 aa		4.84	□□□□□ -1.63
SMF1	YOL122C	VPS27	P40343	622 aa	Known RBP	4.84	□□□□□ -1.63
SMF1	YOL122C	MNT3	P40549	630 aa		4.84	□□□□□ -1.63
SMF1	YOL122C	YBP2	P53169	641 aa		4.84	□□□□□ -1.63
SMF1	YOL122C	MEP3	P53390	489 aa		4.84	□□□□□ -1.63
SMF1	YOL122C	YNR071C	P53757	342 aa		4.84	□□□□□ -1.63
SMF1	YOL122C	YAP6	Q03935	383 aa		4.84	□□□□□ -1.63
SMF1	YOL122C	DUS4	Q06063	367 aa		4.84	□□□□□ -1.63
SMF1	YOL122C	YDR056C	Q12025	205 aa		4.84	□□□□□ -1.63
SMF1	YOL122C	DBP10	Q12389	995 aa	Known RBP	4.84	□□□□□ -1.63
SMF1	YOL122C	NPC2	Q12408	173 aa		4.84	□□□□□ -1.63
SMF1	YOL122C	BUD4	P47136	1447 aa		4.84	□□□□□ -1.63
SMF1	YOL122C	REV3	P14284	1504 aa		4.84	□□□□□ -1.63
SMF1	YOL122C	HSL1	P34244	1518 aa		4.84	□□□□□ -1.63
SMF1	YOL122C	APL2	P36000	726 aa	Predicted RBP	4.83	□□□□□ -1.64
SMF1	YOL122C	PSY4	P38193	441 aa		4.83	□□□□□ -1.64
SMF1	YOL122C	TAF4	P50105	388 aa		4.83	□□□□□ -1.64
SMF1	YOL122C	COX18	P53239	316 aa		4.83	□□□□□ -1.64
SMF1	YOL122C	VPS62	P53285	467 aa		4.83	□□□□□ -1.64
SMF1	YOL122C	EIS1	Q05050	843 aa	Known RBP	4.83	□□□□□ -1.64
SMF1	YOL122C	SGO1	Q08490	590 aa		4.83	□□□□□ -1.64
SMF1	YOL122C	NEW1	Q08972	1196 aa	Known RBP	4.83	□□□□□ -1.64
SMF1	YOL122C	KCS1	Q12494	1050 aa		4.83	□□□□□ -1.64
SMF1	YOL122C	ECM3	Q99252	613 aa		4.83	□□□□□ -1.64
SMF1	YOL122C	UFD4	P33202	1483 aa		4.83	□□□□□ -1.64
SMF1	YOL122C	RNR1	P21524	888 aa	Known RBP	4.83	□□□□□ -1.64
SMF1	YOL122C	GFD2	P25370	566 aa	Known RBP	4.83	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms