RNA–Protein interactions for RNA: YLR120C

YPS1, Transcript of Aspartic protease, yeast

Gene YPS1, Length 1,710 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPS1	YLR120C	ARG2	P40360	574 aa		13.27	□□□□□ -0.28
YPS1	YLR120C	TMA108	P40462	946 aa		13.27	□□□□□ -0.28
YPS1	YLR120C	RSM26	P47141	266 aa		13.27	□□□□□ -0.28
YPS1	YLR120C	MND1	P53102	219 aa		13.27	□□□□□ -0.28
YPS1	YLR120C	MSC2	Q03455	724 aa		13.27	□□□□□ -0.28
YPS1	YLR120C	KAP95	Q06142	861 aa	Known RBP	13.27	□□□□□ -0.28
YPS1	YLR120C	ATG11	Q12527	1178 aa		13.27	□□□□□ -0.28
YPS1	YLR120C	ILV2	P07342	687 aa	Known RBP	13.27	□□□□□ -0.29
YPS1	YLR120C	NOP4	P37838	685 aa	Known RBP	13.27	□□□□□ -0.29
YPS1	YLR120C	YMC2	P38087	329 aa		13.27	□□□□□ -0.29
YPS1	YLR120C	YML020W	Q03722	664 aa		13.27	□□□□□ -0.29
YPS1	YLR120C	THI7	Q05998	598 aa		13.27	□□□□□ -0.29
YPS1	YLR120C	FAP7	Q12055	197 aa	Predicted RBP	13.27	□□□□□ -0.29
YPS1	YLR120C	EMP46	Q12396	444 aa		13.27	□□□□□ -0.29
YPS1	YLR120C	YHR054C	P38780	354 aa		13.26	□□□□□ -0.29
YPS1	YLR120C	HLJ1	P48353	224 aa		13.26	□□□□□ -0.29
YPS1	YLR120C	GPT2	P36148	743 aa		13.25	□□□□□ -0.29
YPS1	YLR120C	YBR062C	P38239	180 aa		13.25	□□□□□ -0.29
YPS1	YLR120C	SWC5	P38326	303 aa		13.25	□□□□□ -0.29
YPS1	YLR120C	YJL045W	P47052	634 aa		13.25	□□□□□ -0.29
YPS1	YLR120C	ADA2	Q02336	434 aa		13.25	□□□□□ -0.29
YPS1	YLR120C	YDR338C	Q05497	695 aa		13.25	□□□□□ -0.29
YPS1	YLR120C	CDC73	Q06697	393 aa		13.25	□□□□□ -0.29
YPS1	YLR120C	YPR027C	Q12079	277 aa		13.25	□□□□□ -0.29
YPS1	YLR120C	CDC24	P11433	854 aa	Predicted RBP	13.25	□□□□□ -0.29
YPS1	YLR120C	GLN3	P18494	730 aa		13.25	□□□□□ -0.29
YPS1	YLR120C	SLY1	P22213	666 aa		13.25	□□□□□ -0.29
YPS1	YLR120C	MSS51	P32335	436 aa		13.25	□□□□□ -0.29
YPS1	YLR120C	MED8	P38304	223 aa		13.25	□□□□□ -0.29
YPS1	YLR120C	GEM1	P39722	662 aa		13.25	□□□□□ -0.29
YPS1	YLR120C	ALA1	P40825	983 aa	Known RBP	13.25	□□□□□ -0.29
YPS1	YLR120C	ARO80	Q04052	950 aa		13.25	□□□□□ -0.29
YPS1	YLR120C	AIM39	Q08223	395 aa		13.25	□□□□□ -0.29
YPS1	YLR120C	BCS1	P32839	456 aa		13.24	□□□□□ -0.29
YPS1	YLR120C	PAM1	P37304	830 aa	Known RBP	13.24	□□□□□ -0.29
YPS1	YLR120C	YBL036C	P38197	257 aa		13.24	□□□□□ -0.29
YPS1	YLR120C	FLC2	P39719	783 aa		13.24	□□□□□ -0.29
YPS1	YLR120C	SAW1	P39735	261 aa		13.24	□□□□□ -0.29
YPS1	YLR120C	RPT2	P40327	437 aa	Known RBP	13.24	□□□□□ -0.29
YPS1	YLR120C	TDA10	P42938	290 aa		13.24	□□□□□ -0.29
YPS1	YLR120C	ASG7	P46993	209 aa		13.24	□□□□□ -0.29
YPS1	YLR120C	ALY2	P47029	1046 aa		13.24	□□□□□ -0.29
YPS1	YLR120C	YJR054W	P47114	497 aa		13.24	□□□□□ -0.29
YPS1	YLR120C	ALG11	P53954	548 aa	Known RBP	13.24	□□□□□ -0.29
YPS1	YLR120C	YNL040W	P53960	456 aa	Predicted RBP	13.24	□□□□□ -0.29
YPS1	YLR120C	YML119W	Q03208	357 aa		13.24	□□□□□ -0.29
YPS1	YLR120C	YRR1	Q12172	810 aa		13.24	□□□□□ -0.29
YPS1	YLR120C	PCD1	Q12524	340 aa		13.24	□□□□□ -0.29
YPS1	YLR120C	ADE4	P04046	510 aa	Known RBP	13.23	□□□□□ -0.29
YPS1	YLR120C	PUT4	P15380	627 aa		13.23	□□□□□ -0.29
YPS1	YLR120C	AFT1	P22149	690 aa		13.23	□□□□□ -0.29
YPS1	YLR120C	VBA3	P25594	458 aa		13.23	□□□□□ -0.29
YPS1	YLR120C	VBA5	P36172	582 aa		13.23	□□□□□ -0.29
YPS1	YLR120C	YNL247W	P53852	767 aa	Known RBP	13.23	□□□□□ -0.29
YPS1	YLR120C	MZM1	Q03429	123 aa	Predicted RBP	13.23	□□□□□ -0.29
YPS1	YLR120C	SNU56	Q03782	492 aa	Known RBP	13.23	□□□□□ -0.29
YPS1	YLR120C	CDD1	Q06549	142 aa		13.23	□□□□□ -0.29
YPS1	YLR120C	TRE1	Q08919	783 aa		13.23	□□□□□ -0.29
YPS1	YLR120C	RIF1	P29539	1916 aa		13.23	□□□□□ -0.29
YPS1	YLR120C	CHS1	P08004	1131 aa		13.22	□□□□□ -0.29
YPS1	YLR120C	SNA3	P14359	133 aa		13.22	□□□□□ -0.29
YPS1	YLR120C	KAR4	P25583	335 aa		13.22	□□□□□ -0.29
YPS1	YLR120C	MEI4	P29467	408 aa		13.22	□□□□□ -0.29
YPS1	YLR120C	YIL054W	P40524	105 aa		13.22	□□□□□ -0.29
YPS1	YLR120C	CDC55	Q00362	526 aa		13.22	□□□□□ -0.29
YPS1	YLR120C	DOT1	Q04089	582 aa	Known RBP	13.22	□□□□□ -0.29
YPS1	YLR120C	CUS1	Q02554	436 aa	Predicted RBP	13.22	□□□□□ -0.29
YPS1	YLR120C	NOB1	Q08444	459 aa	Known RBP	13.22	□□□□□ -0.29
YPS1	YLR120C	ARG1	P22768	420 aa		13.21	□□□□□ -0.3
YPS1	YLR120C	RPT1	P33299	467 aa	Known RBP	13.21	□□□□□ -0.3
YPS1	YLR120C	YBP1	P38315	674 aa		13.21	□□□□□ -0.3
YPS1	YLR120C	MSR1	P38714	643 aa		13.21	□□□□□ -0.3
YPS1	YLR120C	SPC97	P38863	823 aa		13.21	□□□□□ -0.3
YPS1	YLR120C	PMR1	P13586	950 aa		13.2	□□□□□ -0.3
YPS1	YLR120C	SAT4	P25333	603 aa	Known RBP	13.2	□□□□□ -0.3
YPS1	YLR120C	AGP2	P38090	596 aa		13.2	□□□□□ -0.3
YPS1	YLR120C	TBS1	P38114	1094 aa		13.2	□□□□□ -0.3
YPS1	YLR120C	HEK2	P38199	381 aa	Known RBP RIP-Chip data	13.2	□□□□□ -0.3	RIP-Chip
YPS1	YLR120C	YER186C	P40101	306 aa		13.2	□□□□□ -0.3
YPS1	YLR120C	LAM5	P43560	674 aa		13.2	□□□□□ -0.3
YPS1	YLR120C	ISM1	P48526	1002 aa		13.2	□□□□□ -0.3
YPS1	YLR120C	NCS6	P53088	359 aa		13.2	□□□□□ -0.3
YPS1	YLR120C	KTR5	P53966	522 aa	Predicted RBP	13.2	□□□□□ -0.3
YPS1	YLR120C	ELP3	Q02908	557 aa	Known RBP	13.2	□□□□□ -0.3
YPS1	YLR120C	MSH6	Q03834	1242 aa		13.2	□□□□□ -0.3
YPS1	YLR120C	CMS1	Q07897	291 aa	Known RBP	13.2	□□□□□ -0.3
YPS1	YLR120C	VHS3	Q08438	674 aa		13.2	□□□□□ -0.3
YPS1	YLR120C	CTF3	Q12748	733 aa		13.2	□□□□□ -0.3
YPS1	YLR120C	DBP1	P24784	617 aa	Known RBP	13.19	□□□□□ -0.3
YPS1	YLR120C	SRB2	P34162	210 aa		13.19	□□□□□ -0.3
YPS1	YLR120C	SKP2	P42843	763 aa		13.19	□□□□□ -0.3
YPS1	YLR120C	YNL108C	P53929	270 aa		13.19	□□□□□ -0.3
YPS1	YLR120C	TDA5	Q06417	326 aa	Known RBP	13.19	□□□□□ -0.3
YPS1	YLR120C	MDM38	Q08179	573 aa		13.19	□□□□□ -0.3
YPS1	YLR120C	VPS54	Q12071	889 aa		13.19	□□□□□ -0.3
YPS1	YLR120C	PUS1	Q12211	544 aa	Known RBP	13.19	□□□□□ -0.3
YPS1	YLR120C	VPS5	Q92331	675 aa		13.19	□□□□□ -0.3
YPS1	YLR120C	ADE2	P21264	571 aa	Known RBP	13.19	□□□□□ -0.3
YPS1	YLR120C	KIP2	P28743	706 aa		13.19	□□□□□ -0.3
YPS1	YLR120C	NIP1	P32497	812 aa	Known RBP	13.19	□□□□□ -0.3

Retrieved 100 of 5,963 RNA–protein pairs in 798 ms