RNA–Protein interactions for RNA: YJR044C

VPS55, Transcript of Late endosomal protein involved in late endosome to vacuole transport, yeastyeast

Gene VPS55, Length 423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS55YJR044C MIH1P23748 554 aa2.13□□□□□ -2.07
VPS55YJR044C MSS1P32559 526 aaPredicted RBP2.13□□□□□ -2.07
VPS55YJR044C YEL1P34225 687 aa2.13□□□□□ -2.07
VPS55YJR044C MCD4P36051 919 aa2.13□□□□□ -2.07
VPS55YJR044C ELF1P36053 145 aa2.13□□□□□ -2.07
VPS55YJR044C GID8P40208 455 aa2.13□□□□□ -2.07
VPS55YJR044C HUL5P53119 910 aa2.13□□□□□ -2.07
VPS55YJR044C YGL117WP53133 265 aa2.13□□□□□ -2.07
VPS55YJR044C SCW4P53334 386 aaKnown RBP2.13□□□□□ -2.07
VPS55YJR044C VBA3P25594 458 aa2.12□□□□□ -2.07
VPS55YJR044C NGL2Q03264 515 aaKnown RBP2.12□□□□□ -2.07
VPS55YJR044C TRS23Q03784 219 aa2.12□□□□□ -2.07
VPS55YJR044C RPN7Q06103 429 aaKnown RBP2.12□□□□□ -2.07
VPS55YJR044C NEW1Q08972 1196 aaKnown RBP2.12□□□□□ -2.07
VPS55YJR044C MTC2P34246 357 aa2.11□□□□□ -2.07
VPS55YJR044C GCS1P35197 352 aa2.11□□□□□ -2.07
VPS55YJR044C PXL1P36166 706 aa2.11□□□□□ -2.07
VPS55YJR044C MAL11P53048 616 aa2.11□□□□□ -2.07
VPS55YJR044C PCL10P53124 433 aa2.11□□□□□ -2.07
VPS55YJR044C UFO1Q04511 668 aa2.11□□□□□ -2.07
VPS55YJR044C TUP1P16649 713 aa2.1□□□□□ -2.07
VPS55YJR044C EUG1P32474 517 aa2.1□□□□□ -2.07
VPS55YJR044C COS111P38308 924 aa2.1□□□□□ -2.07
VPS55YJR044C RPN10P38886 268 aaKnown RBP2.1□□□□□ -2.07
VPS55YJR044C CCT4P39078 528 aaKnown RBP2.1□□□□□ -2.07
VPS55YJR044C CPR8P53728 308 aa2.1□□□□□ -2.07
VPS55YJR044C ERG13P54839 491 aaKnown RBP2.1□□□□□ -2.07
VPS55YJR044C RSC9Q03124 581 aa2.1□□□□□ -2.07
VPS55YJR044C AQY1P0CD91 305 aa2.09□□□□□ -2.07
VPS55YJR044C ERR1P0CX10 437 aa2.09□□□□□ -2.07
VPS55YJR044C ERR2P0CX11 437 aa2.09□□□□□ -2.07
VPS55YJR044C GAL11P19659 1081 aa2.09□□□□□ -2.07
VPS55YJR044C ASK1P35734 292 aa2.09□□□□□ -2.07
VPS55YJR044C AKL1P38080 1108 aaKnown RBP2.09□□□□□ -2.07
VPS55YJR044C GDH3P39708 457 aa2.09□□□□□ -2.07
VPS55YJR044C NMD5P46970 1048 aa2.09□□□□□ -2.07
VPS55YJR044C BRE5P53741 515 aaKnown RBP2.09□□□□□ -2.07
VPS55YJR044C YFT2Q06676 274 aa2.09□□□□□ -2.07
VPS55YJR044C IRC3Q06683 689 aa2.09□□□□□ -2.07
VPS55YJR044C IZH3Q07959 543 aa2.09□□□□□ -2.07
VPS55YJR044C MRPL9P31334 269 aa2.08□□□□□ -2.08
VPS55YJR044C NTH1P32356 751 aa2.08□□□□□ -2.08
VPS55YJR044C YKR018CP36114 725 aa2.08□□□□□ -2.08
VPS55YJR044C APN2P38207 520 aa2.08□□□□□ -2.08
VPS55YJR044C RIM4P38741 713 aa2.08□□□□□ -2.08
VPS55YJR044C PCI8P40512 444 aa2.08□□□□□ -2.08
VPS55YJR044C MNT3P40549 630 aa2.08□□□□□ -2.08
VPS55YJR044C SET2P46995 733 aaKnown RBP2.08□□□□□ -2.08
VPS55YJR044C LSC1P53598 329 aaKnown RBP2.08□□□□□ -2.08
VPS55YJR044C ORC1P54784 914 aaPredicted RBP2.08□□□□□ -2.08
VPS55YJR044C ISA1Q07821 250 aaPredicted RBP2.08□□□□□ -2.08
VPS55YJR044C POM34Q12445 299 aa2.08□□□□□ -2.08
VPS55YJR044C SEC3P33332 1336 aaKnown RBP2.08□□□□□ -2.08
VPS55YJR044C CDC9P04819 755 aa2.07□□□□□ -2.08
VPS55YJR044C ERG20P08524 352 aaKnown RBP2.07□□□□□ -2.08
VPS55YJR044C HEM1P09950 548 aaPredicted RBP2.07□□□□□ -2.08
VPS55YJR044C PMA2P19657 947 aa2.07□□□□□ -2.08
VPS55YJR044C STO1P34160 861 aaKnown RBP2.07□□□□□ -2.08
VPS55YJR044C BRN1P38170 754 aa2.07□□□□□ -2.08
VPS55YJR044C JHD1P40034 492 aa2.07□□□□□ -2.08
VPS55YJR044C SNO3P43544 222 aa2.07□□□□□ -2.08
VPS55YJR044C YJL049WP47048 450 aa2.07□□□□□ -2.08
VPS55YJR044C NNF1P47149 201 aa2.07□□□□□ -2.08
VPS55YJR044C IOC4Q04213 475 aa2.07□□□□□ -2.08
VPS55YJR044C YTA7P40340 1379 aa2.07□□□□□ -2.08
VPS55YJR044C RPL7AP05737 244 aaKnown RBP2.06□□□□□ -2.08
VPS55YJR044C YAP1P19880 650 aaKnown RBP2.06□□□□□ -2.08
VPS55YJR044C MEF1P25039 761 aa2.06□□□□□ -2.08
VPS55YJR044C HSL7P38274 827 aa2.06□□□□□ -2.08
VPS55YJR044C YJL043WP47053 257 aa2.06□□□□□ -2.08
VPS55YJR044C SNP1Q00916 300 aaPredicted RBP2.06□□□□□ -2.08
VPS55YJR044C NSE3Q05541 303 aa2.06□□□□□ -2.08
VPS55YJR044C RPL7BQ12213 244 aaKnown RBP2.06□□□□□ -2.08
VPS55YJR044C HER1Q12276 1246 aa2.06□□□□□ -2.08
VPS55YJR044C SEC15P22224 910 aa2.05□□□□□ -2.08
VPS55YJR044C TSR4P25040 408 aa2.05□□□□□ -2.08
VPS55YJR044C PPG1P32838 368 aa2.05□□□□□ -2.08
VPS55YJR044C MNN4P36044 1178 aa2.05□□□□□ -2.08
VPS55YJR044C SPC97P38863 823 aa2.05□□□□□ -2.08
VPS55YJR044C CAF16P43569 289 aa2.05□□□□□ -2.08
VPS55YJR044C BST1P43571 1029 aa2.05□□□□□ -2.08
VPS55YJR044C BIT61P47041 543 aa2.05□□□□□ -2.08
VPS55YJR044C NHX1Q04121 633 aa2.05□□□□□ -2.08
VPS55YJR044C CDC53Q12018 815 aaKnown RBP2.05□□□□□ -2.08
VPS55YJR044C CRC1Q12289 327 aa2.05□□□□□ -2.08
VPS55YJR044C ZPS1Q12512 249 aa2.05□□□□□ -2.08
VPS55YJR044C RPS9BP05755 195 aaKnown RBP2.04□□□□□ -2.08
VPS55YJR044C URE2P23202 354 aaKnown RBP2.04□□□□□ -2.08
VPS55YJR044C SRP40P32583 406 aaPredicted RBP2.04□□□□□ -2.08
VPS55YJR044C TIM23P32897 222 aa2.04□□□□□ -2.08
VPS55YJR044C OSW7P43611 510 aa2.04□□□□□ -2.08
VPS55YJR044C YIP4P53093 235 aa2.04□□□□□ -2.08
VPS55YJR044C DAK1P54838 584 aaKnown RBP2.04□□□□□ -2.08
VPS55YJR044C NUP53Q03790 475 aa2.04□□□□□ -2.08
VPS55YJR044C FPR4Q06205 392 aaPredicted RBP2.04□□□□□ -2.08
VPS55YJR044C CPA2P03965 1118 aaKnown RBP2.03□□□□□ -2.08
VPS55YJR044C YMR085WP0CF18 432 aa2.03□□□□□ -2.08
VPS55YJR044C RPC34P32910 317 aa2.03□□□□□ -2.08
VPS55YJR044C YPT7P32939 208 aa2.03□□□□□ -2.08
VPS55YJR044C RRP14P36080 434 aaKnown RBP2.03□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms