RNA–Protein interactions for RNA: YFL001W

DEG1, Transcript of tRNA:pseudouridine synthase, yeastyeast

Gene DEG1, Length 1,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DEG1YFL001W SSM4P40318 1319 aa5.52□□□□□ -1.53
DEG1YFL001W SPA2P23201 1466 aaKnown RBP5.51□□□□□ -1.53
DEG1YFL001W YLR415CO13578 112 aa5.51□□□□□ -1.53
DEG1YFL001W HIS5P07172 385 aa5.51□□□□□ -1.53
DEG1YFL001W VAS1P07806 1104 aaKnown RBP5.51□□□□□ -1.53
DEG1YFL001W TUB3P09734 445 aaKnown RBP5.51□□□□□ -1.53
DEG1YFL001W ADE2P21264 571 aaKnown RBP5.51□□□□□ -1.53
DEG1YFL001W RNQ1P25367 405 aa5.51□□□□□ -1.53
DEG1YFL001W SEC21P32074 935 aaKnown RBP5.51□□□□□ -1.53
DEG1YFL001W LRG1P35688 1017 aa5.51□□□□□ -1.53
DEG1YFL001W APL2P36000 726 aaPredicted RBP5.51□□□□□ -1.53
DEG1YFL001W TAF5P38129 798 aa5.51□□□□□ -1.53
DEG1YFL001W ECM1P39715 212 aa5.51□□□□□ -1.53
DEG1YFL001W MAD2P40958 196 aa5.51□□□□□ -1.53
DEG1YFL001W CHA4P43634 648 aa5.51□□□□□ -1.53
DEG1YFL001W HMO1Q03973 246 aaKnown RBP5.51□□□□□ -1.53
DEG1YFL001W MCM21Q06675 368 aa5.51□□□□□ -1.53
DEG1YFL001W RTK1Q12100 620 aaPredicted RBP5.51□□□□□ -1.53
DEG1YFL001W VPS5Q92331 675 aa5.51□□□□□ -1.53
DEG1YFL001W FRS1P15624 595 aaKnown RBP5.5□□□□□ -1.53
DEG1YFL001W YPT7P32939 208 aa5.5□□□□□ -1.53
DEG1YFL001W MFT1P33441 392 aaKnown RBP5.5□□□□□ -1.53
DEG1YFL001W MPE1P35728 441 aaKnown RBP5.5□□□□□ -1.53
DEG1YFL001W YBR259WP38338 688 aa5.5□□□□□ -1.53
DEG1YFL001W MSS4P38994 779 aa5.5□□□□□ -1.53
DEG1YFL001W MNT3P40549 630 aa5.5□□□□□ -1.53
DEG1YFL001W IMA5P40884 581 aa5.5□□□□□ -1.53
DEG1YFL001W MNT2P53059 558 aa5.5□□□□□ -1.53
DEG1YFL001W NCS6P53088 359 aa5.5□□□□□ -1.53
DEG1YFL001W GTF1P53260 183 aaPredicted RBP5.5□□□□□ -1.53
DEG1YFL001W REC102Q02721 264 aa5.5□□□□□ -1.53
DEG1YFL001W PKH1Q03407 766 aa5.5□□□□□ -1.53
DEG1YFL001W RCR2Q03446 210 aaKnown RBP5.5□□□□□ -1.53
DEG1YFL001W SGD1Q06132 899 aa5.5□□□□□ -1.53
DEG1YFL001W DIN7Q12086 430 aa5.5□□□□□ -1.53
DEG1YFL001W SWM1Q12379 170 aa5.5□□□□□ -1.53
DEG1YFL001W CBP3P21560 335 aa5.49□□□□□ -1.53
DEG1YFL001W CHS3P29465 1165 aa5.49□□□□□ -1.53
DEG1YFL001W XRS2P33301 854 aa5.49□□□□□ -1.53
DEG1YFL001W RRN3P36070 627 aa5.49□□□□□ -1.53
DEG1YFL001W YLF2P38746 405 aa5.49□□□□□ -1.53
DEG1YFL001W ETP1P38748 585 aaKnown RBP5.49□□□□□ -1.53
DEG1YFL001W BUD8P41698 603 aa5.49□□□□□ -1.53
DEG1YFL001W GCV2P49095 1034 aa5.49□□□□□ -1.53
DEG1YFL001W TAF4P50105 388 aa5.49□□□□□ -1.53
DEG1YFL001W MEP3P53390 489 aa5.49□□□□□ -1.53
DEG1YFL001W CPR6P53691 371 aaKnown RBP5.49□□□□□ -1.53
DEG1YFL001W ARC35P53731 342 aaKnown RBP5.49□□□□□ -1.53
DEG1YFL001W HMI1Q12039 706 aa5.49□□□□□ -1.53
DEG1YFL001W RTP1Q12751 981 aa5.49□□□□□ -1.53
DEG1YFL001W KOG1P38873 1557 aa5.49□□□□□ -1.53
DEG1YFL001W CDC6P09119 513 aa5.48□□□□□ -1.53
DEG1YFL001W MTF2P10849 440 aa5.48□□□□□ -1.53
DEG1YFL001W RER1P25560 188 aa5.48□□□□□ -1.53
DEG1YFL001W APT2P36973 181 aa5.48□□□□□ -1.53
DEG1YFL001W PPE1P38796 400 aa5.48□□□□□ -1.53
DEG1YFL001W RAD26P40352 1085 aa5.48□□□□□ -1.53
DEG1YFL001W PXA1P41909 870 aa5.48□□□□□ -1.53
DEG1YFL001W PEF1P53238 335 aa5.48□□□□□ -1.53
DEG1YFL001W VPS62P53285 467 aa5.48□□□□□ -1.53
DEG1YFL001W ESF2P53743 316 aaKnown RBP5.48□□□□□ -1.53
DEG1YFL001W MDM1Q01846 1127 aa5.48□□□□□ -1.53
DEG1YFL001W ROT1Q03691 256 aa5.48□□□□□ -1.53
DEG1YFL001W TRI1Q05024 226 aa5.48□□□□□ -1.53
DEG1YFL001W SGO1Q08490 590 aa5.48□□□□□ -1.53
DEG1YFL001W MCH5Q08777 521 aa5.48□□□□□ -1.53
DEG1YFL001W YDL177CQ12257 170 aa5.48□□□□□ -1.53
DEG1YFL001W CLF1Q12309 687 aaPredicted RBP5.48□□□□□ -1.53
DEG1YFL001W SSN2P38931 1420 aa5.48□□□□□ -1.53
DEG1YFL001W MCM3P24279 971 aaKnown RBP5.48□□□□□ -1.53
DEG1YFL001W YCL049CP25577 312 aa5.48□□□□□ -1.53
DEG1YFL001W IMP2'P32351 346 aa5.48□□□□□ -1.53
DEG1YFL001W YHR112CP38716 378 aa5.48□□□□□ -1.53
DEG1YFL001W LAM1P38851 1228 aa5.48□□□□□ -1.53
DEG1YFL001W STT3P39007 718 aaKnown RBP5.48□□□□□ -1.53
DEG1YFL001W YNR071CP53757 342 aa5.48□□□□□ -1.53
DEG1YFL001W SNO2P53823 222 aa5.48□□□□□ -1.53
DEG1YFL001W SLU7Q02775 382 aaKnown RBP5.48□□□□□ -1.53
DEG1YFL001W PPN1Q04119 674 aa5.48□□□□□ -1.53
DEG1YFL001W YMR018WQ04364 514 aa5.48□□□□□ -1.53
DEG1YFL001W DUS4Q06063 367 aa5.48□□□□□ -1.53
DEG1YFL001W VPS36Q06696 566 aa5.48□□□□□ -1.53
DEG1YFL001W YDR056CQ12025 205 aa5.48□□□□□ -1.53
DEG1YFL001W DBP10Q12389 995 aaKnown RBP5.48□□□□□ -1.53
DEG1YFL001W PHO5P00635 467 aa5.47□□□□□ -1.53
DEG1YFL001W EMC1P25574 760 aa5.47□□□□□ -1.53
DEG1YFL001W YCR015CP25616 317 aa5.47□□□□□ -1.53
DEG1YFL001W CWH43P25618 953 aa5.47□□□□□ -1.53
DEG1YFL001W MTC7P32633 139 aa5.47□□□□□ -1.53
DEG1YFL001W YHR033WP38690 423 aa5.47□□□□□ -1.53
DEG1YFL001W PUG1P40100 303 aa5.47□□□□□ -1.53
DEG1YFL001W SMK1P41808 388 aa5.47□□□□□ -1.53
DEG1YFL001W MRPL13Q02204 264 aa5.47□□□□□ -1.53
DEG1YFL001W GIR2Q03768 265 aaPredicted RBP5.47□□□□□ -1.53
DEG1YFL001W VBA4Q04602 768 aaKnown RBP5.47□□□□□ -1.53
DEG1YFL001W GPB1Q08886 897 aa5.47□□□□□ -1.53
DEG1YFL001W ERG20P08524 352 aaKnown RBP5.46□□□□□ -1.54
DEG1YFL001W NCP1P16603 691 aaKnown RBP5.46□□□□□ -1.54
DEG1YFL001W SIR1P21691 654 aa5.46□□□□□ -1.54
DEG1YFL001W PRE4P30657 266 aa5.46□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms