RNA–Protein interactions for RNA: YDR328C

SKP1, Transcript of Evolutionarily conserved kinetochore protein, yeast

Gene SKP1, Length 585 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP1	YDR328C	HIP1	P06775	603 aa		7.65	□□□□□ -1.18
SKP1	YDR328C	PDR1	P12383	1068 aa		7.65	□□□□□ -1.18
SKP1	YDR328C	SFL1	P20134	766 aa		7.65	□□□□□ -1.18
SKP1	YDR328C	CNS1	P33313	385 aa		7.65	□□□□□ -1.18
SKP1	YDR328C	RPC17	P47076	161 aa		7.65	□□□□□ -1.18
SKP1	YDR328C	URH1	Q04179	340 aa		7.65	□□□□□ -1.18
SKP1	YDR328C	ZRT2	Q12436	422 aa		7.65	□□□□□ -1.18
SKP1	YDR328C	KAR3	P17119	729 aa		7.64	□□□□□ -1.19
SKP1	YDR328C	TRX1	P22217	103 aa	Known RBP	7.64	□□□□□ -1.19
SKP1	YDR328C	TKL2	P33315	681 aa		7.64	□□□□□ -1.19
SKP1	YDR328C	SEG2	P34250	1132 aa		7.64	□□□□□ -1.19
SKP1	YDR328C	MAC1	P35192	417 aa		7.64	□□□□□ -1.19
SKP1	YDR328C	SWC5	P38326	303 aa		7.64	□□□□□ -1.19
SKP1	YDR328C	PCM1	P38628	557 aa	Known RBP	7.64	□□□□□ -1.19
SKP1	YDR328C	MMS21	P38632	267 aa		7.64	□□□□□ -1.19
SKP1	YDR328C	END3	P39013	349 aa		7.64	□□□□□ -1.19
SKP1	YDR328C	CCT4	P39078	528 aa	Known RBP	7.64	□□□□□ -1.19
SKP1	YDR328C	RPT2	P40327	437 aa	Known RBP	7.64	□□□□□ -1.19
SKP1	YDR328C	RSC8	P43609	557 aa	Known RBP	7.64	□□□□□ -1.19
SKP1	YDR328C	RIM8	P53179	542 aa		7.64	□□□□□ -1.19
SKP1	YDR328C	YPL062W	Q02781	134 aa		7.64	□□□□□ -1.19
SKP1	YDR328C	MTG1	Q03151	367 aa	Predicted RBP	7.64	□□□□□ -1.19
SKP1	YDR328C	YMR187C	Q03236	431 aa		7.64	□□□□□ -1.19
SKP1	YDR328C	RRB1	Q04225	511 aa	Known RBP	7.64	□□□□□ -1.19
SKP1	YDR328C	UFO1	Q04511	668 aa		7.64	□□□□□ -1.19
SKP1	YDR328C	TDA9	Q04545	1251 aa		7.64	□□□□□ -1.19
SKP1	YDR328C	IVY1	Q04934	453 aa		7.64	□□□□□ -1.19
SKP1	YDR328C	ATG23	Q06671	453 aa		7.64	□□□□□ -1.19
SKP1	YDR328C	MDM38	Q08179	573 aa		7.64	□□□□□ -1.19
SKP1	YDR328C	AIM39	Q08223	395 aa		7.64	□□□□□ -1.19
SKP1	YDR328C	CIR2	Q08822	631 aa		7.64	□□□□□ -1.19
SKP1	YDR328C	GPM2	Q12008	311 aa		7.64	□□□□□ -1.19
SKP1	YDR328C	EMP46	Q12396	444 aa		7.64	□□□□□ -1.19
SKP1	YDR328C	APM4	Q99186	491 aa		7.64	□□□□□ -1.19
SKP1	YDR328C	TAO3	P40468	2376 aa		7.64	□□□□□ -1.19
SKP1	YDR328C	ATP1	P07251	545 aa	Known RBP	7.63	□□□□□ -1.19
SKP1	YDR328C	PMS1	P14242	873 aa		7.63	□□□□□ -1.19
SKP1	YDR328C	RPO26	P20435	155 aa		7.63	□□□□□ -1.19
SKP1	YDR328C	AEP2	P22136	580 aa		7.63	□□□□□ -1.19
SKP1	YDR328C	LRE1	P25579	583 aa	Known RBP	7.63	□□□□□ -1.19
SKP1	YDR328C	SEC1	P30619	724 aa	Known RBP	7.63	□□□□□ -1.19
SKP1	YDR328C	VPH1	P32563	840 aa	Known RBP	7.63	□□□□□ -1.19
SKP1	YDR328C	GCS1	P35197	352 aa		7.63	□□□□□ -1.19
SKP1	YDR328C	MSC7	P38694	644 aa		7.63	□□□□□ -1.19
SKP1	YDR328C	APM2	P38700	605 aa		7.63	□□□□□ -1.19
SKP1	YDR328C	RAD55	P38953	406 aa		7.63	□□□□□ -1.19
SKP1	YDR328C	PFD1	P46988	109 aa		7.63	□□□□□ -1.19
SKP1	YDR328C	NUT1	P53114	1132 aa		7.63	□□□□□ -1.19
SKP1	YDR328C	NOG2	P53742	486 aa	Known RBP	7.63	□□□□□ -1.19
SKP1	YDR328C	ADA2	Q02336	434 aa		7.63	□□□□□ -1.19
SKP1	YDR328C	PNG1	Q02890	363 aa		7.63	□□□□□ -1.19
SKP1	YDR328C	EMI2	Q04409	500 aa	Known RBP	7.63	□□□□□ -1.19
SKP1	YDR328C	TAF9	Q05027	157 aa		7.63	□□□□□ -1.19
SKP1	YDR328C	NOP6	Q07623	225 aa	Known RBP	7.63	□□□□□ -1.19
SKP1	YDR328C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	7.63	□□□□□ -1.19	not detected
SKP1	YDR328C	AIM41	Q12032	185 aa		7.63	□□□□□ -1.19
SKP1	YDR328C	TUB3	P09734	445 aa	Known RBP	7.62	□□□□□ -1.19
SKP1	YDR328C	MET4	P32389	672 aa		7.62	□□□□□ -1.19
SKP1	YDR328C	SRB2	P34162	210 aa		7.62	□□□□□ -1.19
SKP1	YDR328C	PRP31	P49704	494 aa	Predicted RBP	7.62	□□□□□ -1.19
SKP1	YDR328C	YNL108C	P53929	270 aa		7.62	□□□□□ -1.19
SKP1	YDR328C	KAP95	Q06142	861 aa	Known RBP	7.62	□□□□□ -1.19
SKP1	YDR328C	MRI1	Q06489	411 aa	Known RBP	7.62	□□□□□ -1.19
SKP1	YDR328C	RCL1	Q08096	367 aa	Predicted RBP	7.62	□□□□□ -1.19
SKP1	YDR328C	APC5	Q08683	685 aa		7.62	□□□□□ -1.19
SKP1	YDR328C	TAF10	Q12030	206 aa		7.62	□□□□□ -1.19
SKP1	YDR328C	NUR1	Q12066	484 aa		7.62	□□□□□ -1.19
SKP1	YDR328C	NOP58	Q12499	511 aa	Known RBP	7.62	□□□□□ -1.19
SKP1	YDR328C	PRC1	P00729	532 aa		7.61	□□□□□ -1.19
SKP1	YDR328C	RAD10	P06838	210 aa		7.61	□□□□□ -1.19
SKP1	YDR328C	YPK1	P12688	680 aa	Known RBP	7.61	□□□□□ -1.19
SKP1	YDR328C	PCA1	P38360	1216 aa		7.61	□□□□□ -1.19
SKP1	YDR328C	SAK1	P38990	1142 aa		7.61	□□□□□ -1.19
SKP1	YDR328C	LYS9	P38999	446 aa		7.61	□□□□□ -1.19
SKP1	YDR328C	ERP2	P39704	215 aa		7.61	□□□□□ -1.19
SKP1	YDR328C	TGL3	P40308	642 aa		7.61	□□□□□ -1.19
SKP1	YDR328C	TMA108	P40462	946 aa		7.61	□□□□□ -1.19
SKP1	YDR328C	YIL054W	P40524	105 aa		7.61	□□□□□ -1.19
SKP1	YDR328C	TAF1	P46677	1066 aa		7.61	□□□□□ -1.19
SKP1	YDR328C	INP52	P50942	1183 aa		7.61	□□□□□ -1.19
SKP1	YDR328C	MET13	P53128	600 aa		7.61	□□□□□ -1.19
SKP1	YDR328C	CDC55	Q00362	526 aa		7.61	□□□□□ -1.19
SKP1	YDR328C	YML083C	Q04526	418 aa		7.61	□□□□□ -1.19
SKP1	YDR328C	THI7	Q05998	598 aa		7.61	□□□□□ -1.19
SKP1	YDR328C	NBP2	Q12163	236 aa		7.61	□□□□□ -1.19
SKP1	YDR328C	YRR1	Q12172	810 aa		7.61	□□□□□ -1.19
SKP1	YDR328C	VPS5	Q92331	675 aa		7.61	□□□□□ -1.19
SKP1	YDR328C	KGD2	P19262	463 aa	Predicted RBP	7.6	□□□□□ -1.19
SKP1	YDR328C	GCD6	P32501	712 aa	Known RBP	7.6	□□□□□ -1.19
SKP1	YDR328C	PEX2	P32800	271 aa		7.6	□□□□□ -1.19
SKP1	YDR328C	YBR053C	P38235	358 aa		7.6	□□□□□ -1.19
SKP1	YDR328C	SIF2	P38262	535 aa		7.6	□□□□□ -1.19
SKP1	YDR328C	STB5	P38699	743 aa		7.6	□□□□□ -1.19
SKP1	YDR328C	FHL1	P39521	936 aa		7.6	□□□□□ -1.19
SKP1	YDR328C	KHA1	P40309	873 aa		7.6	□□□□□ -1.19
SKP1	YDR328C	ARG2	P40360	574 aa		7.6	□□□□□ -1.19
SKP1	YDR328C	PRK1	P40494	810 aa		7.6	□□□□□ -1.19
SKP1	YDR328C	NMD5	P46970	1048 aa		7.6	□□□□□ -1.19
SKP1	YDR328C	YJL045W	P47052	634 aa		7.6	□□□□□ -1.19
SKP1	YDR328C	YNL247W	P53852	767 aa	Known RBP	7.6	□□□□□ -1.19

Retrieved 100 of 5,963 RNA–protein pairs in 62.2 ms