RNA–Protein interactions for RNA: YDR301W

CFT1, Transcript of RNA-binding subunit of the mRNA cleavage and polyadenylation factor, yeastyeast

Gene CFT1, Length 4,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CFT1YDR301W VPS72Q03388 795 aa1.81□□□□□ -2.12
CFT1YDR301W SLX4Q12098 748 aa1.81□□□□□ -2.12
CFT1YDR301W OSH2Q12451 1283 aa1.81□□□□□ -2.12
CFT1YDR301W PEP5P12868 1029 aa1.8□□□□□ -2.12
CFT1YDR301W PDC6P26263 563 aaKnown RBP1.8□□□□□ -2.12
CFT1YDR301W GCD6P32501 712 aaKnown RBP1.8□□□□□ -2.12
CFT1YDR301W MAC1P35192 417 aa1.8□□□□□ -2.12
CFT1YDR301W ECM13P38195 257 aa1.8□□□□□ -2.12
CFT1YDR301W RFS1P38234 210 aaKnown RBP1.8□□□□□ -2.12
CFT1YDR301W SWC5P38326 303 aa1.8□□□□□ -2.12
CFT1YDR301W LYS9P38999 446 aa1.8□□□□□ -2.12
CFT1YDR301W MAD1P40957 749 aa1.8□□□□□ -2.12
CFT1YDR301W MMM1P41800 426 aa1.8□□□□□ -2.12
CFT1YDR301W MET13P53128 600 aa1.8□□□□□ -2.12
CFT1YDR301W HOP2P53187 214 aa1.8□□□□□ -2.12
CFT1YDR301W PEX31P53203 462 aa1.8□□□□□ -2.12
CFT1YDR301W MSH6Q03834 1242 aa1.8□□□□□ -2.12
CFT1YDR301W MCM16Q12262 181 aa1.8□□□□□ -2.12
CFT1YDR301W NHA1Q99271 985 aa1.8□□□□□ -2.12
CFT1YDR301W CDC33P07260 213 aaKnown RBP1.8□□□□□ -2.12
CFT1YDR301W TUB3P09734 445 aaKnown RBP1.8□□□□□ -2.12
CFT1YDR301W MSH3P25336 1018 aa1.8□□□□□ -2.12
CFT1YDR301W PGS1P25578 521 aa1.8□□□□□ -2.12
CFT1YDR301W PEP12P32854 288 aa1.8□□□□□ -2.12
CFT1YDR301W SMC1P32908 1225 aa1.8□□□□□ -2.12
CFT1YDR301W SRP101P32916 621 aa1.8□□□□□ -2.12
CFT1YDR301W DRE2P36152 348 aa1.8□□□□□ -2.12
CFT1YDR301W JHD1P40034 492 aa1.8□□□□□ -2.12
CFT1YDR301W TAF1P46677 1066 aa1.8□□□□□ -2.12
CFT1YDR301W VPS25P47142 202 aa1.8□□□□□ -2.12
CFT1YDR301W PSP1P50896 841 aaKnown RBP1.8□□□□□ -2.12
CFT1YDR301W KAP114P53067 1004 aa1.8□□□□□ -2.12
CFT1YDR301W TBF1Q02457 562 aa1.8□□□□□ -2.12
CFT1YDR301W UME1Q03010 460 aa1.8□□□□□ -2.12
CFT1YDR301W YMR187CQ03236 431 aa1.8□□□□□ -2.12
CFT1YDR301W TDA9Q04545 1251 aa1.8□□□□□ -2.12
CFT1YDR301W ECI1Q05871 280 aa1.8□□□□□ -2.12
CFT1YDR301W TDA5Q06417 326 aaKnown RBP1.8□□□□□ -2.12
CFT1YDR301W MAG2Q06436 670 aaKnown RBP1.8□□□□□ -2.12
CFT1YDR301W NUR1Q12066 484 aa1.8□□□□□ -2.12
CFT1YDR301W AVL9Q12500 764 aa1.8□□□□□ -2.12
CFT1YDR301W MIS1P09440 975 aaKnown RBP1.8□□□□□ -2.12
CFT1YDR301W MTF2P10849 440 aa1.8□□□□□ -2.12
CFT1YDR301W PUP1P25043 261 aa1.8□□□□□ -2.12
CFT1YDR301W VBA3P25594 458 aa1.8□□□□□ -2.12
CFT1YDR301W CDC48P25694 835 aaKnown RBP1.8□□□□□ -2.12
CFT1YDR301W FRE1P32791 686 aa1.8□□□□□ -2.12
CFT1YDR301W NFU1P32860 256 aa1.8□□□□□ -2.12
CFT1YDR301W BEM3P32873 1128 aa1.8□□□□□ -2.12
CFT1YDR301W TKL2P33315 681 aa1.8□□□□□ -2.12
CFT1YDR301W RPC25P35718 212 aa1.8□□□□□ -2.12
CFT1YDR301W VBA5P36172 582 aa1.8□□□□□ -2.12
CFT1YDR301W SHE3P38272 425 aaKnown RBP1.8□□□□□ -2.12
CFT1YDR301W RGD1P38339 666 aa1.8□□□□□ -2.12
CFT1YDR301W PCA1P38360 1216 aa1.8□□□□□ -2.12
CFT1YDR301W MET14Q02196 202 aa1.8□□□□□ -2.12
CFT1YDR301W SPP1Q03012 353 aa1.8□□□□□ -2.12
CFT1YDR301W YPR109WQ06104 294 aa1.8□□□□□ -2.12
CFT1YDR301W SHS1Q07657 551 aa1.8□□□□□ -2.12
CFT1YDR301W ABP140Q08641 628 aaKnown RBP1.8□□□□□ -2.12
CFT1YDR301W NOP14Q99207 810 aaKnown RBP1.8□□□□□ -2.12
CFT1YDR301W SCP160P06105 1222 aaKnown RBP RIP-Chip data1.79□□□□□ -2.12 RIP-Chip
CFT1YDR301W MST1P07236 462 aa1.79□□□□□ -2.12
CFT1YDR301W TYE7P33122 291 aaPredicted RBP1.79□□□□□ -2.12
CFT1YDR301W BYE1P36106 594 aa1.79□□□□□ -2.12
CFT1YDR301W YKR051WP36142 418 aa1.79□□□□□ -2.12
CFT1YDR301W POL12P38121 705 aaPredicted RBP1.79□□□□□ -2.12
CFT1YDR301W APN2P38207 520 aa1.79□□□□□ -2.12
CFT1YDR301W PCM1P38628 557 aaKnown RBP1.79□□□□□ -2.12
CFT1YDR301W SIP5P40210 489 aaKnown RBP1.79□□□□□ -2.12
CFT1YDR301W PXA1P41909 870 aa1.79□□□□□ -2.12
CFT1YDR301W YJR039WP47107 1121 aa1.79□□□□□ -2.12
CFT1YDR301W HLJ1P48353 224 aa1.79□□□□□ -2.12
CFT1YDR301W SPC98P53540 846 aa1.79□□□□□ -2.12
CFT1YDR301W RCR2Q03446 210 aaKnown RBP1.79□□□□□ -2.12
CFT1YDR301W SNU56Q03782 492 aaKnown RBP1.79□□□□□ -2.12
CFT1YDR301W SND1Q04007 877 aa1.79□□□□□ -2.12
CFT1YDR301W VTI1Q04338 217 aa1.79□□□□□ -2.12
CFT1YDR301W THI7Q05998 598 aa1.79□□□□□ -2.12
CFT1YDR301W AIM39Q08223 395 aa1.79□□□□□ -2.12
CFT1YDR301W CLP1Q08685 445 aaPredicted RBP1.79□□□□□ -2.12
CFT1YDR301W VPS54Q12071 889 aa1.79□□□□□ -2.12
CFT1YDR301W RRP6Q12149 733 aaKnown RBP1.79□□□□□ -2.12
CFT1YDR301W NCR1Q12200 1170 aa1.79□□□□□ -2.12
CFT1YDR301W GPM3Q12326 303 aa1.79□□□□□ -2.12
CFT1YDR301W VPS5Q92331 675 aa1.79□□□□□ -2.12
CFT1YDR301W UBR1P19812 1950 aa1.79□□□□□ -2.12
CFT1YDR301W CCP1P00431 361 aa1.79□□□□□ -2.12
CFT1YDR301W VAN1P23642 535 aa1.79□□□□□ -2.12
CFT1YDR301W RRT12P25381 491 aa1.79□□□□□ -2.12
CFT1YDR301W PAT1P25644 796 aaKnown RBP1.79□□□□□ -2.12
CFT1YDR301W PRR1P28708 518 aa1.79□□□□□ -2.12
CFT1YDR301W NIP100P33420 868 aa1.79□□□□□ -2.12
CFT1YDR301W STO1P34160 861 aaKnown RBP1.79□□□□□ -2.12
CFT1YDR301W TSA1P34760 196 aaKnown RBP1.79□□□□□ -2.12
CFT1YDR301W SPT8P38915 602 aa1.79□□□□□ -2.12
CFT1YDR301W SAK1P38990 1142 aa1.79□□□□□ -2.12
CFT1YDR301W END3P39013 349 aa1.79□□□□□ -2.12
CFT1YDR301W RRN7P40992 514 aa1.79□□□□□ -2.12
CFT1YDR301W DRN1P53255 507 aaKnown RBP1.79□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 7.2 ms