RNA–Protein interactions for RNA: YDL220C

CDC13, Transcript of Single stranded DNA-binding protein found at TG1-3 telomere G-tails, yeast

Gene CDC13, Length 2,775 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC13	YDL220C	GPI13	Q07830	1017 aa		7.35	□□□□□ -1.23
CDC13	YDL220C	RPB2	P08518	1224 aa	Known RBP	7.34	□□□□□ -1.23
CDC13	YDL220C	URA4	P20051	364 aa		7.34	□□□□□ -1.23
CDC13	YDL220C	SAC6	P32599	642 aa	Known RBP	7.34	□□□□□ -1.23
CDC13	YDL220C	TDP1	P38319	544 aa		7.34	□□□□□ -1.23
CDC13	YDL220C	YHR112C	P38716	378 aa		7.34	□□□□□ -1.23
CDC13	YDL220C	SSP120	P39931	234 aa	Known RBP	7.34	□□□□□ -1.23
CDC13	YDL220C	SMX2	P40204	77 aa	Known RBP	7.34	□□□□□ -1.23
CDC13	YDL220C	YNL320W	P42840	284 aa		7.34	□□□□□ -1.23
CDC13	YDL220C	GTB1	Q04924	702 aa		7.34	□□□□□ -1.23
CDC13	YDL220C	PHM6	Q05637	104 aa		7.34	□□□□□ -1.23
CDC13	YDL220C	CYB2	P00175	591 aa		7.34	□□□□□ -1.23
CDC13	YDL220C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	7.34	□□□□□ -1.23	not detected
CDC13	YDL220C	KIN3	P22209	435 aa		7.34	□□□□□ -1.23
CDC13	YDL220C	UBP11	P36026	717 aa		7.34	□□□□□ -1.23
CDC13	YDL220C	MAL31	P38156	614 aa		7.34	□□□□□ -1.23
CDC13	YDL220C	SLM4	P38247	162 aa		7.34	□□□□□ -1.23
CDC13	YDL220C	RCY1	P39531	840 aa		7.34	□□□□□ -1.23
CDC13	YDL220C	PAC11	P40960	533 aa		7.34	□□□□□ -1.23
CDC13	YDL220C	CNM67	P53865	581 aa	Known RBP	7.34	□□□□□ -1.23
CDC13	YDL220C	TMA20	P89886	181 aa	Predicted RBP	7.34	□□□□□ -1.23
CDC13	YDL220C	ISU1	Q03020	165 aa		7.34	□□□□□ -1.23
CDC13	YDL220C	ACL4	Q03771	387 aa		7.34	□□□□□ -1.23
CDC13	YDL220C	YBR298C-A	Q8TGK4	73 aa		7.34	□□□□□ -1.23
CDC13	YDL220C	RAD61	Q99359	647 aa		7.34	□□□□□ -1.23
CDC13	YDL220C	SRV2	P17555	526 aa	Known RBP	7.33	□□□□□ -1.24
CDC13	YDL220C	COQ8	P27697	501 aa		7.33	□□□□□ -1.24
CDC13	YDL220C	JEM1	P40358	645 aa		7.33	□□□□□ -1.24
CDC13	YDL220C	MIG2	P53035	382 aa		7.33	□□□□□ -1.24
CDC13	YDL220C	ORC4	P54791	529 aa		7.33	□□□□□ -1.24
CDC13	YDL220C	FOX2	Q02207	900 aa	Known RBP	7.33	□□□□□ -1.24
CDC13	YDL220C	GFD1	Q04839	188 aa	Known RBP	7.33	□□□□□ -1.24
CDC13	YDL220C	BAG7	Q12128	409 aa		7.33	□□□□□ -1.24
CDC13	YDL220C	NTO1	Q12311	748 aa		7.33	□□□□□ -1.24
CDC13	YDL220C	YRM1	Q12340	786 aa		7.33	□□□□□ -1.24
CDC13	YDL220C	EMP46	Q12396	444 aa		7.33	□□□□□ -1.24
CDC13	YDL220C	RPS19A	P07280	144 aa	Known RBP	7.33	□□□□□ -1.24
CDC13	YDL220C	RPS19B	P07281	144 aa	Predicted RBP	7.33	□□□□□ -1.24
CDC13	YDL220C	PMA2	P19657	947 aa		7.33	□□□□□ -1.24
CDC13	YDL220C	SWI4	P25302	1093 aa	Known RBP	7.33	□□□□□ -1.24
CDC13	YDL220C	TYE7	P33122	291 aa	Predicted RBP	7.33	□□□□□ -1.24
CDC13	YDL220C	STP2	P38704	541 aa		7.33	□□□□□ -1.24
CDC13	YDL220C	YHL050C	P38721	697 aa		7.33	□□□□□ -1.24
CDC13	YDL220C	MTG2	P38860	518 aa		7.33	□□□□□ -1.24
CDC13	YDL220C	CCT6	P39079	546 aa		7.33	□□□□□ -1.24
CDC13	YDL220C	SLX8	P40072	274 aa		7.33	□□□□□ -1.24
CDC13	YDL220C	SHE9	Q04172	456 aa		7.33	□□□□□ -1.24
CDC13	YDL220C	MDM20	Q12387	796 aa	Known RBP	7.33	□□□□□ -1.24
CDC13	YDL220C	ERP4	Q12450	207 aa		7.33	□□□□□ -1.24
CDC13	YDL220C	YEL077C	Q3E7X8	1277 aa		7.33	□□□□□ -1.24
CDC13	YDL220C	VCX1	Q99385	411 aa		7.33	□□□□□ -1.24
CDC13	YDL220C	RPS17A	P02407	136 aa	Known RBP	7.32	□□□□□ -1.24
CDC13	YDL220C	RPS17B	P14127	136 aa	Known RBP	7.32	□□□□□ -1.24
CDC13	YDL220C	MRPL32	P25348	183 aa		7.32	□□□□□ -1.24
CDC13	YDL220C	ILV6	P25605	309 aa	Known RBP	7.32	□□□□□ -1.24
CDC13	YDL220C	TEF4	P36008	412 aa	Known RBP	7.32	□□□□□ -1.24
CDC13	YDL220C	PMC1	P38929	1173 aa	Predicted RBP	7.32	□□□□□ -1.24
CDC13	YDL220C	FMP10	P40098	244 aa		7.32	□□□□□ -1.24
CDC13	YDL220C	LYS14	P40971	790 aa		7.32	□□□□□ -1.24
CDC13	YDL220C	YJL055W	P47044	245 aa		7.32	□□□□□ -1.24
CDC13	YDL220C	YGR067C	P53243	804 aa		7.32	□□□□□ -1.24
CDC13	YDL220C	DRN1	P53255	507 aa	Known RBP	7.32	□□□□□ -1.24
CDC13	YDL220C	UME1	Q03010	460 aa		7.32	□□□□□ -1.24
CDC13	YDL220C	RPL6B	P05739	176 aa	Known RBP	7.32	□□□□□ -1.24
CDC13	YDL220C	CLN3	P13365	580 aa		7.32	□□□□□ -1.24
CDC13	YDL220C	RGP1	P16664	663 aa		7.32	□□□□□ -1.24
CDC13	YDL220C	KIP2	P28743	706 aa		7.32	□□□□□ -1.24
CDC13	YDL220C	DSE1	P40077	573 aa		7.32	□□□□□ -1.24
CDC13	YDL220C	INP51	P40559	946 aa	Known RBP	7.32	□□□□□ -1.24
CDC13	YDL220C	LYS4	P49367	693 aa	Predicted RBP	7.32	□□□□□ -1.24
CDC13	YDL220C	TAF6	P53040	516 aa		7.32	□□□□□ -1.24
CDC13	YDL220C	PNP1	Q05788	311 aa		7.32	□□□□□ -1.24
CDC13	YDL220C	CDC19	P00549	500 aa	Known RBP	7.31	□□□□□ -1.24
CDC13	YDL220C	MRPL33	P20084	86 aa		7.31	□□□□□ -1.24
CDC13	YDL220C	VPS3	P23643	1011 aa		7.31	□□□□□ -1.24
CDC13	YDL220C	SBA1	P28707	216 aa	Known RBP	7.31	□□□□□ -1.24
CDC13	YDL220C	YBL055C	P34220	418 aa	Predicted RBP	7.31	□□□□□ -1.24
CDC13	YDL220C	BAP2	P38084	609 aa		7.31	□□□□□ -1.24
CDC13	YDL220C	RDH54	P38086	958 aa		7.31	□□□□□ -1.24
CDC13	YDL220C	LIF1	P53150	421 aa		7.31	□□□□□ -1.24
CDC13	YDL220C	DBP6	P53734	629 aa	Known RBP	7.31	□□□□□ -1.24
CDC13	YDL220C	RSC4	Q02206	625 aa		7.31	□□□□□ -1.24
CDC13	YDL220C	GCN5	Q03330	439 aa		7.31	□□□□□ -1.24
CDC13	YDL220C	RVB1	Q03940	463 aa	Known RBP	7.31	□□□□□ -1.24
CDC13	YDL220C	DPH6	Q12429	685 aa		7.31	□□□□□ -1.24
CDC13	YDL220C	UTP10	P42945	1769 aa	Known RBP	7.31	□□□□□ -1.24
CDC13	YDL220C	RPC53	P25441	422 aa		7.31	□□□□□ -1.24
CDC13	YDL220C	RPT5	P33297	434 aa	Known RBP	7.31	□□□□□ -1.24
CDC13	YDL220C	DOM34	P33309	386 aa		7.31	□□□□□ -1.24
CDC13	YDL220C	ECM31	P38122	312 aa		7.31	□□□□□ -1.24
CDC13	YDL220C	GDH3	P39708	457 aa		7.31	□□□□□ -1.24
CDC13	YDL220C	OKP1	P53298	406 aa		7.31	□□□□□ -1.24
CDC13	YDL220C	RVS161	P25343	265 aa	Known RBP	7.31	□□□□□ -1.24
CDC13	YDL220C	RPS5	P26783	225 aa	Known RBP	7.31	□□□□□ -1.24
CDC13	YDL220C	HES1	P35843	434 aa		7.31	□□□□□ -1.24
CDC13	YDL220C	SET3	P36124	751 aa		7.31	□□□□□ -1.24
CDC13	YDL220C	TIF5	P38431	405 aa	Known RBP	7.31	□□□□□ -1.24
CDC13	YDL220C	YHL008C	P38750	627 aa		7.31	□□□□□ -1.24
CDC13	YDL220C	YHR219W	P38900	624 aa		7.31	□□□□□ -1.24
CDC13	YDL220C	CCT3	P39077	534 aa	Known RBP	7.31	□□□□□ -1.24

Retrieved 100 of 5,963 RNA–protein pairs in 30.9 ms