RNA–Protein interactions for RNA: YLR196W

PWP1, Transcript of Protein with WD-40 repeats involved in rRNA processing, yeastyeast

Gene PWP1, Length 1,731 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PWP1YLR196W ERT1P38140 529 aa5.47□□□□□ -1.53
PWP1YLR196W ECM21P38167 1117 aaKnown RBP5.47□□□□□ -1.53
PWP1YLR196W MRX3P38172 270 aa5.47□□□□□ -1.53
PWP1YLR196W POP7P38291 140 aa5.47□□□□□ -1.53
PWP1YLR196W YHI9P38765 294 aa5.47□□□□□ -1.53
PWP1YLR196W HXT6P39003 570 aaKnown RBP5.47□□□□□ -1.53
PWP1YLR196W HXT7P39004 570 aa5.47□□□□□ -1.53
PWP1YLR196W SPO22P40511 975 aa5.47□□□□□ -1.53
PWP1YLR196W SAP185P40856 1058 aa5.47□□□□□ -1.53
PWP1YLR196W BUD6P41697 788 aa5.47□□□□□ -1.53
PWP1YLR196W GYP8P43570 497 aa5.47□□□□□ -1.53
PWP1YLR196W ISM1P48526 1002 aa5.47□□□□□ -1.53
PWP1YLR196W MRPS35P53292 345 aa5.47□□□□□ -1.53
PWP1YLR196W GOR1P53839 350 aa5.47□□□□□ -1.53
PWP1YLR196W SIW14P53965 281 aa5.47□□□□□ -1.53
PWP1YLR196W MAK10Q02197 733 aa5.47□□□□□ -1.53
PWP1YLR196W EGD1Q02642 157 aaKnown RBP5.47□□□□□ -1.53
PWP1YLR196W SPC2Q04969 178 aa5.47□□□□□ -1.53
PWP1YLR196W SGD1Q06132 899 aa5.47□□□□□ -1.53
PWP1YLR196W PUF3Q07807 879 aaKnown RBP RIP-Chip data5.47□□□□□ -1.53not detected
PWP1YLR196W TYW1Q08960 810 aaKnown RBP5.47□□□□□ -1.53
PWP1YLR196W LAP2Q10740 671 aa5.47□□□□□ -1.53
PWP1YLR196W ATG9Q12142 997 aa5.47□□□□□ -1.53
PWP1YLR196W CPA2P03965 1118 aaKnown RBP5.46□□□□□ -1.54
PWP1YLR196W STE3P06783 470 aa5.46□□□□□ -1.54
PWP1YLR196W PMR1P13586 950 aa5.46□□□□□ -1.54
PWP1YLR196W PRP16P15938 1071 aaPredicted RBP5.46□□□□□ -1.54
PWP1YLR196W PFK2P16862 959 aaKnown RBP RIP-Chip data5.46□□□□□ -1.54not detected
PWP1YLR196W SEC2P17065 759 aa5.46□□□□□ -1.54
PWP1YLR196W PRP6P19735 899 aaPredicted RBP5.46□□□□□ -1.54
PWP1YLR196W RAM2P29703 316 aa5.46□□□□□ -1.54
PWP1YLR196W SRB4P32569 687 aa5.46□□□□□ -1.54
PWP1YLR196W YKT6P36015 200 aaKnown RBP5.46□□□□□ -1.54
PWP1YLR196W DBP7P36120 742 aaKnown RBP5.46□□□□□ -1.54
PWP1YLR196W BSD2P38356 321 aa5.46□□□□□ -1.54
PWP1YLR196W SPT8P38915 602 aa5.46□□□□□ -1.54
PWP1YLR196W NDE1P40215 560 aa5.46□□□□□ -1.54
PWP1YLR196W ZIM17P42844 174 aa5.46□□□□□ -1.54
PWP1YLR196W BRE2P43132 505 aa5.46□□□□□ -1.54
PWP1YLR196W DAK2P43550 591 aa5.46□□□□□ -1.54
PWP1YLR196W VMA10P48836 114 aaKnown RBP5.46□□□□□ -1.54
PWP1YLR196W TOM22P49334 152 aa5.46□□□□□ -1.54
PWP1YLR196W LIF1P53150 421 aa5.46□□□□□ -1.54
PWP1YLR196W CIK1Q01649 594 aa5.46□□□□□ -1.54
PWP1YLR196W ATG13Q06628 738 aa5.46□□□□□ -1.54
PWP1YLR196W MCM21Q06675 368 aa5.46□□□□□ -1.54
PWP1YLR196W CDC53Q12018 815 aaKnown RBP5.46□□□□□ -1.54
PWP1YLR196W FAP7Q12055 197 aaPredicted RBP5.46□□□□□ -1.54
PWP1YLR196W BBP1Q12365 385 aa5.46□□□□□ -1.54
PWP1YLR196W STF1P01098 86 aa5.45□□□□□ -1.54
PWP1YLR196W THR1P17423 357 aaKnown RBP5.45□□□□□ -1.54
PWP1YLR196W SPB1P25582 841 aaPredicted RBP5.45□□□□□ -1.54
PWP1YLR196W NAM7P30771 971 aaKnown RBP5.45□□□□□ -1.54
PWP1YLR196W DPH2P32461 534 aa5.45□□□□□ -1.54
PWP1YLR196W GLC3P32775 704 aa5.45□□□□□ -1.54
PWP1YLR196W YKL023WP36103 277 aaKnown RBP5.45□□□□□ -1.54
PWP1YLR196W NUP133P36161 1157 aa5.45□□□□□ -1.54
PWP1YLR196W BOI1P38041 980 aaKnown RBP5.45□□□□□ -1.54
PWP1YLR196W YHR131CP38835 850 aa5.45□□□□□ -1.54
PWP1YLR196W BIM1P40013 344 aa5.45□□□□□ -1.54
PWP1YLR196W NEO1P40527 1151 aa5.45□□□□□ -1.54
PWP1YLR196W EPL1P43572 832 aa5.45□□□□□ -1.54
PWP1YLR196W YJR039WP47107 1121 aa5.45□□□□□ -1.54
PWP1YLR196W FMS1P50264 508 aa5.45□□□□□ -1.54
PWP1YLR196W LSB1P53281 241 aa5.45□□□□□ -1.54
PWP1YLR196W BUL2Q03758 920 aaKnown RBP5.45□□□□□ -1.54
PWP1YLR196W SND1Q04007 877 aa5.45□□□□□ -1.54
PWP1YLR196W SHE9Q04172 456 aa5.45□□□□□ -1.54
PWP1YLR196W YLR287CQ05881 355 aa5.45□□□□□ -1.54
PWP1YLR196W YCS4Q06156 1176 aa5.45□□□□□ -1.54
PWP1YLR196W YLR326WQ06170 240 aaKnown RBP5.45□□□□□ -1.54
PWP1YLR196W DTD1Q07648 150 aaKnown RBP5.45□□□□□ -1.54
PWP1YLR196W VHS3Q08438 674 aa5.45□□□□□ -1.54
PWP1YLR196W SGO1Q08490 590 aa5.45□□□□□ -1.54
PWP1YLR196W RSA1Q08932 381 aa5.45□□□□□ -1.54
PWP1YLR196W IES3Q12345 250 aa5.45□□□□□ -1.54
PWP1YLR196W ADF1Q2V2Q1 113 aa5.45□□□□□ -1.54
PWP1YLR196W FUR4P05316 633 aaKnown RBP5.45□□□□□ -1.54
PWP1YLR196W TIF1P10081 395 aaKnown RBP5.45□□□□□ -1.54
PWP1YLR196W PUT4P15380 627 aa5.45□□□□□ -1.54
PWP1YLR196W NCP1P16603 691 aaKnown RBP5.45□□□□□ -1.54
PWP1YLR196W CLB3P24870 427 aa5.45□□□□□ -1.54
PWP1YLR196W APL1P27351 700 aa5.45□□□□□ -1.54
PWP1YLR196W NIP1P32497 812 aaKnown RBP5.45□□□□□ -1.54
PWP1YLR196W SRP40P32583 406 aaPredicted RBP5.45□□□□□ -1.54
PWP1YLR196W TFB1P32776 642 aa5.45□□□□□ -1.54
PWP1YLR196W PPQ1P32945 549 aa5.45□□□□□ -1.54
PWP1YLR196W KTR3P38130 404 aaPredicted RBP5.45□□□□□ -1.54
PWP1YLR196W KAP104P38217 918 aaKnown RBP5.45□□□□□ -1.54
PWP1YLR196W STS1P38637 319 aa5.45□□□□□ -1.54
PWP1YLR196W UTP9P38882 575 aaKnown RBP5.45□□□□□ -1.54
PWP1YLR196W TED1P40533 473 aa5.45□□□□□ -1.54
PWP1YLR196W KAP114P53067 1004 aa5.45□□□□□ -1.54
PWP1YLR196W MRPL50P53724 139 aa5.45□□□□□ -1.54
PWP1YLR196W SFB2P53953 876 aa5.45□□□□□ -1.54
PWP1YLR196W COG6P53959 839 aa5.45□□□□□ -1.54
PWP1YLR196W SWP1Q02795 286 aa5.45□□□□□ -1.54
PWP1YLR196W SPC19Q03954 165 aa5.45□□□□□ -1.54
PWP1YLR196W RSM24Q03976 319 aa5.45□□□□□ -1.54
PWP1YLR196W SPO20Q04359 397 aa5.45□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms