RNA–Protein interactions for RNA: YLR022C

SDO1, Transcript of Guanine nucleotide exchange factor (GEF) for Ria1p, yeast

Gene SDO1, Length 753 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SDO1	YLR022C	GIN4	Q12263	1142 aa		4.14	□□□□□ -1.75
SDO1	YLR022C	HBN1	Q96VH4	193 aa		4.14	□□□□□ -1.75
SDO1	YLR022C	FLO1	P32768	1537 aa		4.13	□□□□□ -1.75
SDO1	YLR022C	URA1	P28272	314 aa	Predicted RBP	4.13	□□□□□ -1.75
SDO1	YLR022C	GRX4	P32642	244 aa		4.13	□□□□□ -1.75
SDO1	YLR022C	TYE7	P33122	291 aa	Predicted RBP	4.13	□□□□□ -1.75
SDO1	YLR022C	YBR284W	P38150	797 aa		4.13	□□□□□ -1.75
SDO1	YLR022C	CTF8	P38877	133 aa		4.13	□□□□□ -1.75
SDO1	YLR022C	SDP1	P40479	209 aa		4.13	□□□□□ -1.75
SDO1	YLR022C	GSM1	P42950	618 aa		4.13	□□□□□ -1.75
SDO1	YLR022C	ZDS2	P54786	942 aa		4.13	□□□□□ -1.75
SDO1	YLR022C	YKR011C	Q02209	353 aa		4.13	□□□□□ -1.75
SDO1	YLR022C	SLU7	Q02775	382 aa	Known RBP	4.13	□□□□□ -1.75
SDO1	YLR022C	ALE1	Q08548	619 aa		4.13	□□□□□ -1.75
SDO1	YLR022C	SSP2	Q08646	371 aa		4.13	□□□□□ -1.75
SDO1	YLR022C	YPR071W	Q12346	211 aa		4.13	□□□□□ -1.75
SDO1	YLR022C	OSH2	Q12451	1283 aa		4.13	□□□□□ -1.75
SDO1	YLR022C	YOR131C	Q12486	218 aa		4.13	□□□□□ -1.75
SDO1	YLR022C	TOR2	P32600	2474 aa	Known RBP	4.12	□□□□□ -1.75
SDO1	YLR022C	HSP60	P19882	572 aa	Known RBP	4.12	□□□□□ -1.75
SDO1	YLR022C	RFA1	P22336	621 aa	Known RBP	4.12	□□□□□ -1.75
SDO1	YLR022C	ARE1	P25628	610 aa		4.12	□□□□□ -1.75
SDO1	YLR022C	EFT1	P32324	842 aa	Known RBP	4.12	□□□□□ -1.75
SDO1	YLR022C	RPD3	P32561	433 aa		4.12	□□□□□ -1.75
SDO1	YLR022C	YHR020W	P38708	688 aa	Known RBP	4.12	□□□□□ -1.75
SDO1	YLR022C	HDA1	P53973	706 aa		4.12	□□□□□ -1.75
SDO1	YLR022C	ENV7	Q12003	364 aa		4.12	□□□□□ -1.75
SDO1	YLR022C	CIT1	P00890	479 aa		4.11	□□□□□ -1.75
SDO1	YLR022C	TRP4	P07285	380 aa	Predicted RBP	4.11	□□□□□ -1.75
SDO1	YLR022C	MPH2	P0CD99	609 aa		4.11	□□□□□ -1.75
SDO1	YLR022C	TOP3	P13099	656 aa		4.11	□□□□□ -1.75
SDO1	YLR022C	SEC21	P32074	935 aa	Known RBP	4.11	□□□□□ -1.75
SDO1	YLR022C	YIL108W	P40483	696 aa	Known RBP	4.11	□□□□□ -1.75
SDO1	YLR022C	TIM54	P47045	478 aa		4.11	□□□□□ -1.75
SDO1	YLR022C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.11	□□□□□ -1.75	RIP-Chip
SDO1	YLR022C	VID30	P53076	958 aa		4.11	□□□□□ -1.75
SDO1	YLR022C	UBX2	Q04228	584 aa		4.11	□□□□□ -1.75
SDO1	YLR022C	FLO11	P08640	1367 aa		4.11	□□□□□ -1.75
SDO1	YLR022C	AUS1	Q08409	1394 aa		4.11	□□□□□ -1.75
SDO1	YLR022C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.1	□□□□□ -1.75	not detected
SDO1	YLR022C	CAD1	P24813	409 aa	Known RBP	4.1	□□□□□ -1.75
SDO1	YLR022C	KRE2	P27809	442 aa		4.1	□□□□□ -1.75
SDO1	YLR022C	UBP6	P43593	499 aa	Known RBP	4.1	□□□□□ -1.75
SDO1	YLR022C	DSD1	P53095	428 aa		4.1	□□□□□ -1.75
SDO1	YLR022C	ERG5	P54781	538 aa		4.1	□□□□□ -1.75
SDO1	YLR022C	PPM2	Q08282	695 aa		4.1	□□□□□ -1.75
SDO1	YLR022C	ICL2	Q12031	575 aa		4.1	□□□□□ -1.75
SDO1	YLR022C	DAP1	Q12091	152 aa		4.1	□□□□□ -1.75
SDO1	YLR022C	TY3A-G	Q12173	290 aa		4.1	□□□□□ -1.75
SDO1	YLR022C	TY3A-I	Q99219	290 aa		4.1	□□□□□ -1.75
SDO1	YLR022C	SSK22	P25390	1331 aa	Predicted RBP	4.1	□□□□□ -1.75
SDO1	YLR022C	TUB3	P09734	445 aa	Known RBP	4.09	□□□□□ -1.75
SDO1	YLR022C	KCC4	P25389	1037 aa		4.09	□□□□□ -1.75
SDO1	YLR022C	KTR4	P38131	464 aa		4.09	□□□□□ -1.75
SDO1	YLR022C	CEP3	P40969	608 aa		4.09	□□□□□ -1.75
SDO1	YLR022C	NET1	P47035	1189 aa		4.09	□□□□□ -1.75
SDO1	YLR022C	YGR125W	P53273	1036 aa		4.09	□□□□□ -1.75
SDO1	YLR022C	PRP42	Q03776	544 aa	Known RBP	4.09	□□□□□ -1.75
SDO1	YLR022C	HIM1	Q06674	414 aa		4.09	□□□□□ -1.75
SDO1	YLR022C	YDL124W	Q07551	312 aa	Known RBP	4.09	□□□□□ -1.75
SDO1	YLR022C	YLR040C	Q07988	224 aa		4.09	□□□□□ -1.75
SDO1	YLR022C	EMC3	P36039	253 aa		4.08	□□□□□ -1.76
SDO1	YLR022C	MOH1	P38191	138 aa		4.08	□□□□□ -1.76
SDO1	YLR022C	SNM1	P40993	198 aa		4.08	□□□□□ -1.76
SDO1	YLR022C	NOG2	P53742	486 aa	Known RBP	4.08	□□□□□ -1.76
SDO1	YLR022C	TAP42	Q04372	366 aa		4.08	□□□□□ -1.76
SDO1	YLR022C	PEX19	Q07418	342 aa		4.08	□□□□□ -1.76
SDO1	YLR022C	FLC1	Q08967	793 aa		4.08	□□□□□ -1.76
SDO1	YLR022C	SUT2	Q12286	268 aa		4.08	□□□□□ -1.76
SDO1	YLR022C	TUS1	Q06412	1307 aa		4.07	□□□□□ -1.76
SDO1	YLR022C	RPS9A	O13516	197 aa	Known RBP	4.07	□□□□□ -1.76
SDO1	YLR022C	ERG4	P25340	473 aa		4.07	□□□□□ -1.76
SDO1	YLR022C	CDC60	P26637	1090 aa	Known RBP	4.07	□□□□□ -1.76
SDO1	YLR022C	CTF13	P35203	478 aa		4.07	□□□□□ -1.76
SDO1	YLR022C	YHR078W	P38799	552 aa		4.07	□□□□□ -1.76
SDO1	YLR022C	HUL4	P40985	892 aa		4.07	□□□□□ -1.76
SDO1	YLR022C	NIT3	P49954	291 aa		4.07	□□□□□ -1.76
SDO1	YLR022C	ZDS1	P50111	915 aa	Known RBP	4.07	□□□□□ -1.76
SDO1	YLR022C	YOL073C	Q08232	322 aa		4.07	□□□□□ -1.76
SDO1	YLR022C	MDM20	Q12387	796 aa	Known RBP	4.07	□□□□□ -1.76
SDO1	YLR022C	TRM11	Q12463	433 aa		4.07	□□□□□ -1.76
SDO1	YLR022C	FAB1	P34756	2278 aa		4.06	□□□□□ -1.76
SDO1	YLR022C	RPS7A	P26786	190 aa	Known RBP	4.06	□□□□□ -1.76
SDO1	YLR022C	OAR1	P35731	278 aa		4.06	□□□□□ -1.76
SDO1	YLR022C	APL2	P36000	726 aa	Predicted RBP	4.06	□□□□□ -1.76
SDO1	YLR022C	MCD4	P36051	919 aa		4.06	□□□□□ -1.76
SDO1	YLR022C	BET3	P36149	193 aa		4.06	□□□□□ -1.76
SDO1	YLR022C	GGA2	P38817	585 aa	Known RBP	4.06	□□□□□ -1.76
SDO1	YLR022C	GYP8	P43570	497 aa		4.06	□□□□□ -1.76
SDO1	YLR022C	UBA2	P52488	636 aa		4.06	□□□□□ -1.76
SDO1	YLR022C	HUL5	P53119	910 aa		4.06	□□□□□ -1.76
SDO1	YLR022C	YGR283C	P53336	341 aa	Predicted RBP	4.06	□□□□□ -1.76
SDO1	YLR022C	RPT4	P53549	437 aa	Known RBP	4.06	□□□□□ -1.76
SDO1	YLR022C	BRE5	P53741	515 aa	Known RBP	4.06	□□□□□ -1.76
SDO1	YLR022C	CFT2	Q12102	859 aa	Predicted RBP	4.06	□□□□□ -1.76
SDO1	YLR022C	SWM1	Q12379	170 aa		4.06	□□□□□ -1.76
SDO1	YLR022C	ADR1	P07248	1323 aa		4.05	□□□□□ -1.76
SDO1	YLR022C	CAN1	P04817	590 aa		4.05	□□□□□ -1.76
SDO1	YLR022C	TOM70	P07213	617 aa	Known RBP	4.05	□□□□□ -1.76
SDO1	YLR022C	PRP4	P20053	465 aa	Known RBP	4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms