RNA–Protein interactions for RNA: YKR088C

TVP38, Transcript of Integral membrane protein, yeastyeast

Gene TVP38, Length 1,014 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TVP38YKR088C YPL150WQ12152 901 aa5.13□□□□□ -1.59
TVP38YKR088C SFI1Q12369 946 aa5.13□□□□□ -1.59
TVP38YKR088C NCB2Q92317 146 aa5.13□□□□□ -1.59
TVP38YKR088C DDP1Q99321 188 aaKnown RBP5.13□□□□□ -1.59
TVP38YKR088C SWI1P09547 1314 aa5.13□□□□□ -1.59
TVP38YKR088C PDR18P53756 1333 aa5.13□□□□□ -1.59
TVP38YKR088C CPA2P03965 1118 aaKnown RBP5.12□□□□□ -1.59
TVP38YKR088C SES1P07284 462 aaKnown RBP5.12□□□□□ -1.59
TVP38YKR088C GFA1P14742 717 aaKnown RBP5.12□□□□□ -1.59
TVP38YKR088C MNR2P35724 969 aa5.12□□□□□ -1.59
TVP38YKR088C NUP133P36161 1157 aa5.12□□□□□ -1.59
TVP38YKR088C RAD26P40352 1085 aa5.12□□□□□ -1.59
TVP38YKR088C YGL242CP53066 181 aa5.12□□□□□ -1.59
TVP38YKR088C ZDS2P54786 942 aa5.12□□□□□ -1.59
TVP38YKR088C DLT1Q04216 342 aa5.12□□□□□ -1.59
TVP38YKR088C AFT2Q08957 416 aa5.12□□□□□ -1.59
TVP38YKR088C SLM3Q12093 417 aa5.12□□□□□ -1.59
TVP38YKR088C TPM1P17536 199 aaKnown RBP5.11□□□□□ -1.59
TVP38YKR088C RDS1P25611 832 aa5.11□□□□□ -1.59
TVP38YKR088C SEC21P32074 935 aaKnown RBP5.11□□□□□ -1.59
TVP38YKR088C PPZ2P33329 710 aa5.11□□□□□ -1.59
TVP38YKR088C CTF13P35203 478 aa5.11□□□□□ -1.59
TVP38YKR088C YKR078WP36158 585 aaKnown RBP5.11□□□□□ -1.59
TVP38YKR088C KTR3P38130 404 aaPredicted RBP5.11□□□□□ -1.59
TVP38YKR088C UBP12P39538 1254 aa5.11□□□□□ -1.59
TVP38YKR088C SMC3P47037 1230 aa5.11□□□□□ -1.59
TVP38YKR088C MLC1P53141 149 aa5.11□□□□□ -1.59
TVP38YKR088C SNU71P53207 620 aaKnown RBP5.11□□□□□ -1.59
TVP38YKR088C DUS3Q06053 668 aaKnown RBP5.11□□□□□ -1.59
TVP38YKR088C MFT1P33441 392 aaKnown RBP5.1□□□□□ -1.59
TVP38YKR088C ELO3P40319 345 aa5.1□□□□□ -1.59
TVP38YKR088C VPS30Q02948 557 aa5.1□□□□□ -1.59
TVP38YKR088C VPS60Q03390 229 aa5.1□□□□□ -1.59
TVP38YKR088C HOF1Q05080 669 aa5.1□□□□□ -1.59
TVP38YKR088C PSK2Q08217 1101 aa5.1□□□□□ -1.59
TVP38YKR088C ALE1Q08548 619 aa5.1□□□□□ -1.59
TVP38YKR088C TRM11Q12463 433 aa5.1□□□□□ -1.59
TVP38YKR088C GPA1P08539 472 aa5.09□□□□□ -1.59
TVP38YKR088C LPD1P09624 499 aaKnown RBP5.09□□□□□ -1.59
TVP38YKR088C CDC48P25694 835 aaKnown RBP5.09□□□□□ -1.59
TVP38YKR088C MAL33P38157 468 aa5.09□□□□□ -1.59
TVP38YKR088C TDP1P38319 544 aa5.09□□□□□ -1.59
TVP38YKR088C YPT11P48559 417 aa5.09□□□□□ -1.59
TVP38YKR088C IMO32P53219 342 aa5.09□□□□□ -1.59
TVP38YKR088C NOP14Q99207 810 aaKnown RBP5.09□□□□□ -1.59
TVP38YKR088C PET111P08468 800 aa5.08□□□□□ -1.6
TVP38YKR088C MATALPHA2P0CY08 210 aa5.08□□□□□ -1.6
TVP38YKR088C HMLALPHA2P0CY09 210 aa5.08□□□□□ -1.6
TVP38YKR088C MRC1P25588 1096 aa5.08□□□□□ -1.6
TVP38YKR088C ASF1P32447 279 aa5.08□□□□□ -1.6
TVP38YKR088C PIB2P53191 635 aa5.08□□□□□ -1.6
TVP38YKR088C SSL1Q04673 461 aaPredicted RBP5.08□□□□□ -1.6
TVP38YKR088C COQ11Q05892 277 aa5.08□□□□□ -1.6
TVP38YKR088C ADY4Q05955 493 aa5.08□□□□□ -1.6
TVP38YKR088C SUT2Q12286 268 aa5.08□□□□□ -1.6
TVP38YKR088C SWM1Q12379 170 aa5.08□□□□□ -1.6
TVP38YKR088C CAF20P12962 161 aaKnown RBP5.07□□□□□ -1.6
TVP38YKR088C MDM10P18409 493 aa5.07□□□□□ -1.6
TVP38YKR088C HCA4P20448 770 aaKnown RBP5.07□□□□□ -1.6
TVP38YKR088C ABD1P32783 436 aaPredicted RBP5.07□□□□□ -1.6
TVP38YKR088C STE13P33894 931 aa5.07□□□□□ -1.6
TVP38YKR088C RFT1P38206 574 aaPredicted RBP5.07□□□□□ -1.6
TVP38YKR088C TSL1P38427 1098 aaKnown RBP5.07□□□□□ -1.6
TVP38YKR088C MBP1P39678 833 aa5.07□□□□□ -1.6
TVP38YKR088C YER130CP39959 443 aa5.07□□□□□ -1.6
TVP38YKR088C SDP1P40479 209 aa5.07□□□□□ -1.6
TVP38YKR088C VID28P40547 921 aa5.07□□□□□ -1.6
TVP38YKR088C JSN1P47135 1091 aaKnown RBP RIP-Chip data5.07□□□□□ -1.6not detected
TVP38YKR088C YLR407WQ06070 228 aa5.07□□□□□ -1.6
TVP38YKR088C COG4Q06096 861 aa5.07□□□□□ -1.6
TVP38YKR088C TUB1P09733 447 aaKnown RBP5.06□□□□□ -1.6
TVP38YKR088C CDC43P18898 376 aa5.06□□□□□ -1.6
TVP38YKR088C GSY2P27472 705 aa5.06□□□□□ -1.6
TVP38YKR088C SRP40P32583 406 aaPredicted RBP5.06□□□□□ -1.6
TVP38YKR088C RIX1P38883 763 aaPredicted RBP5.06□□□□□ -1.6
TVP38YKR088C TFG2P41896 400 aaPredicted RBP5.06□□□□□ -1.6
TVP38YKR088C YGL082WP53155 381 aa5.06□□□□□ -1.6
TVP38YKR088C ARP5P53946 755 aa5.06□□□□□ -1.6
TVP38YKR088C WAR1Q03631 944 aa5.06□□□□□ -1.6
TVP38YKR088C PGA3Q12746 312 aaKnown RBP5.06□□□□□ -1.6
TVP38YKR088C YNL162W-AQ3E7A8 72 aa5.06□□□□□ -1.6
TVP38YKR088C FBP1P09201 348 aa5.05□□□□□ -1.6
TVP38YKR088C ILV6P25605 309 aaKnown RBP5.05□□□□□ -1.6
TVP38YKR088C MSH1P25846 959 aa5.05□□□□□ -1.6
TVP38YKR088C SPC110P32380 944 aa5.05□□□□□ -1.6
TVP38YKR088C YKT6P36015 200 aaKnown RBP5.05□□□□□ -1.6
TVP38YKR088C PAM1P37304 830 aaKnown RBP5.05□□□□□ -1.6
TVP38YKR088C OSH3P38713 996 aaKnown RBP5.05□□□□□ -1.6
TVP38YKR088C PRP31P49704 494 aaPredicted RBP5.05□□□□□ -1.6
TVP38YKR088C YGR053CP53234 283 aa5.05□□□□□ -1.6
TVP38YKR088C MRS2Q01926 470 aa5.05□□□□□ -1.6
TVP38YKR088C YAP7Q08182 245 aa5.05□□□□□ -1.6
TVP38YKR088C CTI6Q08923 506 aa5.05□□□□□ -1.6
TVP38YKR088C UTP10P42945 1769 aaKnown RBP5.05□□□□□ -1.6
TVP38YKR088C SSK22P25390 1331 aaPredicted RBP5.04□□□□□ -1.6
TVP38YKR088C PGI1P12709 554 aaKnown RBP5.04□□□□□ -1.6
TVP38YKR088C OPI1P21957 404 aa5.04□□□□□ -1.6
TVP38YKR088C PRP45P28004 379 aaPredicted RBP5.04□□□□□ -1.6
TVP38YKR088C DEP1P31385 405 aa5.04□□□□□ -1.6
TVP38YKR088C YBR238CP38330 731 aaKnown RBP5.04□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 45 ms