RNA–Protein interactions for RNA: YIR040C

YIR040C, Transcript of Dubious open reading frame, yeastyeast

Gene YIR040C, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YIR040CYIR040C RIO1Q12196 484 aaKnown RBP3.55□□□□□ -1.84
YIR040CYIR040C RRI2Q12348 645 aa3.55□□□□□ -1.84
YIR040CYIR040C YOR131CQ12486 218 aa3.55□□□□□ -1.84
YIR040CYIR040C YLR358CO13565 187 aa3.54□□□□□ -1.84
YIR040CYIR040C ENA1P13587 1091 aa3.54□□□□□ -1.84
YIR040CYIR040C PET123P17558 318 aa3.54□□□□□ -1.84
YIR040CYIR040C LST4P34239 828 aa3.54□□□□□ -1.84
YIR040CYIR040C ATG19P35193 415 aa3.54□□□□□ -1.84
YIR040CYIR040C YRO2P38079 344 aa3.54□□□□□ -1.84
YIR040CYIR040C PIH1P38768 344 aa3.54□□□□□ -1.84
YIR040CYIR040C SHC1P39000 512 aa3.54□□□□□ -1.84
YIR040CYIR040C POP2P39008 433 aa3.54□□□□□ -1.84
YIR040CYIR040C TIF4631P39935 952 aaKnown RBP3.54□□□□□ -1.84
YIR040CYIR040C ARB1P40024 610 aaKnown RBP3.54□□□□□ -1.84
YIR040CYIR040C RTT105P40063 208 aa3.54□□□□□ -1.84
YIR040CYIR040C VID27P40157 782 aa3.54□□□□□ -1.84
YIR040CYIR040C MET12P46151 657 aa3.54□□□□□ -1.84
YIR040CYIR040C DAS1P47005 663 aa3.54□□□□□ -1.84
YIR040CYIR040C PBP1P53297 722 aaKnown RBP3.54□□□□□ -1.84
YIR040CYIR040C HST1P53685 503 aa3.54□□□□□ -1.84
YIR040CYIR040C ENA2Q01896 1091 aa3.54□□□□□ -1.84
YIR040CYIR040C RRP17Q04031 235 aaPredicted RBP3.54□□□□□ -1.84
YIR040CYIR040C ECM11Q04110 302 aa3.54□□□□□ -1.84
YIR040CYIR040C GAD1Q04792 585 aa3.54□□□□□ -1.84
YIR040CYIR040C YLR224WQ05947 369 aa3.54□□□□□ -1.84
YIR040CYIR040C MDM36Q06820 579 aa3.54□□□□□ -1.84
YIR040CYIR040C YPL191CQ08930 360 aa3.54□□□□□ -1.84
YIR040CYIR040C RTC5Q12108 567 aaKnown RBP3.54□□□□□ -1.84
YIR040CYIR040C NYV1Q12255 253 aa3.54□□□□□ -1.84
YIR040CYIR040C ENA5Q12691 1091 aa3.54□□□□□ -1.84
YIR040CYIR040C SWI1P09547 1314 aa3.53□□□□□ -1.84
YIR040CYIR040C MET6P05694 767 aaKnown RBP3.53□□□□□ -1.84
YIR040CYIR040C RAD4P14736 754 aa3.53□□□□□ -1.84
YIR040CYIR040C PWP1P21304 576 aaKnown RBP3.53□□□□□ -1.84
YIR040CYIR040C POL4P25615 582 aa3.53□□□□□ -1.84
YIR040CYIR040C DAL80P26343 269 aa3.53□□□□□ -1.84
YIR040CYIR040C CTS1P29029 562 aa3.53□□□□□ -1.84
YIR040CYIR040C RPL8BP29453 256 aaKnown RBP3.53□□□□□ -1.84
YIR040CYIR040C AAR2P32357 355 aaPredicted RBP3.53□□□□□ -1.84
YIR040CYIR040C SSO1P32867 290 aa3.53□□□□□ -1.84
YIR040CYIR040C YKL222CP35995 705 aa3.53□□□□□ -1.84
YIR040CYIR040C PSY4P38193 441 aa3.53□□□□□ -1.84
YIR040CYIR040C YBL028CP38202 106 aa3.53□□□□□ -1.84
YIR040CYIR040C RRF1P38771 230 aa3.53□□□□□ -1.84
YIR040CYIR040C SPC72P39723 622 aa3.53□□□□□ -1.84
YIR040CYIR040C SAP185P40856 1058 aa3.53□□□□□ -1.84
YIR040CYIR040C RET2P43621 546 aa3.53□□□□□ -1.84
YIR040CYIR040C YJL049WP47048 450 aa3.53□□□□□ -1.84
YIR040CYIR040C TRF5P48561 642 aaKnown RBP3.53□□□□□ -1.84
YIR040CYIR040C YKE2P52553 114 aa3.53□□□□□ -1.84
YIR040CYIR040C RSC1P53236 928 aa3.53□□□□□ -1.84
YIR040CYIR040C YNL144CP53907 740 aa3.53□□□□□ -1.84
YIR040CYIR040C NAN1Q02931 896 aaKnown RBP3.53□□□□□ -1.84
YIR040CYIR040C RRN5Q02983 363 aa3.53□□□□□ -1.84
YIR040CYIR040C SVL3Q03088 825 aaKnown RBP3.53□□□□□ -1.84
YIR040CYIR040C BUL2Q03758 920 aaKnown RBP3.53□□□□□ -1.84
YIR040CYIR040C YMR018WQ04364 514 aa3.53□□□□□ -1.84
YIR040CYIR040C FUS2Q05670 677 aa3.53□□□□□ -1.84
YIR040CYIR040C TMA10Q06177 86 aa3.53□□□□□ -1.84
YIR040CYIR040C CRN1Q06440 651 aa3.53□□□□□ -1.84
YIR040CYIR040C CSR1Q06705 408 aaKnown RBP3.53□□□□□ -1.84
YIR040CYIR040C TSR1Q07381 788 aaKnown RBP3.53□□□□□ -1.84
YIR040CYIR040C CIR2Q08822 631 aa3.53□□□□□ -1.84
YIR040CYIR040C TUF1P02992 437 aaKnown RBP3.52□□□□□ -1.85
YIR040CYIR040C SES1P07284 462 aaKnown RBP3.52□□□□□ -1.85
YIR040CYIR040C RPC40P07703 335 aaKnown RBP3.52□□□□□ -1.85
YIR040CYIR040C CIT2P08679 460 aa3.52□□□□□ -1.85
YIR040CYIR040C STI1P15705 589 aaKnown RBP RIP-Chip data3.52□□□□□ -1.85not detected
YIR040CYIR040C SSH4P32343 579 aa3.52□□□□□ -1.85
YIR040CYIR040C YME2P32843 850 aa3.52□□□□□ -1.85
YIR040CYIR040C PEX6P33760 1030 aa3.52□□□□□ -1.85
YIR040CYIR040C SHM2P37291 469 aaKnown RBP3.52□□□□□ -1.85
YIR040CYIR040C POA1P38218 177 aa3.52□□□□□ -1.85
YIR040CYIR040C YBR238CP38330 731 aaKnown RBP3.52□□□□□ -1.85
YIR040CYIR040C VPS41P38959 992 aa3.52□□□□□ -1.85
YIR040CYIR040C MNN1P39106 762 aa3.52□□□□□ -1.85
YIR040CYIR040C MAM1P40065 302 aa3.52□□□□□ -1.85
YIR040CYIR040C YER158CP40095 573 aa3.52□□□□□ -1.85
YIR040CYIR040C ALR2P43553 858 aa3.52□□□□□ -1.85
YIR040CYIR040C YGR012WP53206 393 aa3.52□□□□□ -1.85
YIR040CYIR040C UTP8P53276 713 aaKnown RBP3.52□□□□□ -1.85
YIR040CYIR040C HOL1P53389 586 aa3.52□□□□□ -1.85
YIR040CYIR040C IST1P53843 298 aaPredicted RBP3.52□□□□□ -1.85
YIR040CYIR040C RTC4P53850 401 aa3.52□□□□□ -1.85
YIR040CYIR040C SPO19Q03029 223 aa3.52□□□□□ -1.85
YIR040CYIR040C RPN4Q03465 531 aa3.52□□□□□ -1.85
YIR040CYIR040C YDL073WQ07454 984 aa3.52□□□□□ -1.85
YIR040CYIR040C WHI4Q07655 649 aaKnown RBP3.52□□□□□ -1.85
YIR040CYIR040C TCB3Q03640 1545 aaKnown RBP3.52□□□□□ -1.85
YIR040CYIR040C ADE8P04161 214 aa3.51□□□□□ -1.85
YIR040CYIR040C ATP4P05626 244 aa3.51□□□□□ -1.85
YIR040CYIR040C RPS3P05750 240 aaKnown RBP3.51□□□□□ -1.85
YIR040CYIR040C HIS5P07172 385 aa3.51□□□□□ -1.85
YIR040CYIR040C SPE1P08432 466 aa3.51□□□□□ -1.85
YIR040CYIR040C HSF1P10961 833 aa3.51□□□□□ -1.85
YIR040CYIR040C HOM2P13663 365 aaKnown RBP3.51□□□□□ -1.85
YIR040CYIR040C SWC3P31376 625 aa3.51□□□□□ -1.85
YIR040CYIR040C STO1P34160 861 aaKnown RBP3.51□□□□□ -1.85
YIR040CYIR040C PTH2P34222 208 aa3.51□□□□□ -1.85
YIR040CYIR040C YKR078WP36158 585 aaKnown RBP3.51□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 50.1 ms