RNA–Protein interactions for RNA: YFL044C

OTU1, Transcript of Deubiquitylation enzyme that binds to the chaperone-ATPase Cdc48p, yeastyeast

Gene OTU1, Length 906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
OTU1YFL044C MSC2Q03455 724 aa4.36□□□□□ -1.71
OTU1YFL044C SHE9Q04172 456 aa4.36□□□□□ -1.71
OTU1YFL044C RSA3Q05942 220 aaKnown RBP4.36□□□□□ -1.71
OTU1YFL044C GIC2Q06648 383 aa4.36□□□□□ -1.71
OTU1YFL044C SPO75Q07798 868 aa4.36□□□□□ -1.71
OTU1YFL044C FMP25Q08023 583 aa4.36□□□□□ -1.71
OTU1YFL044C OSH2Q12451 1283 aa4.36□□□□□ -1.71
OTU1YFL044C YLR422WQ06409 1932 aa4.35□□□□□ -1.71
OTU1YFL044C CIT1P00890 479 aa4.35□□□□□ -1.71
OTU1YFL044C SWI6P09959 803 aa4.35□□□□□ -1.71
OTU1YFL044C ACE2P21192 770 aa4.35□□□□□ -1.71
OTU1YFL044C YCK2P23292 546 aaKnown RBP4.35□□□□□ -1.71
OTU1YFL044C RIT1P23796 513 aa4.35□□□□□ -1.71
OTU1YFL044C MLS1P30952 554 aa4.35□□□□□ -1.71
OTU1YFL044C ANP1P32629 500 aa4.35□□□□□ -1.71
OTU1YFL044C RGD1P38339 666 aa4.35□□□□□ -1.71
OTU1YFL044C QNS1P38795 714 aaKnown RBP4.35□□□□□ -1.71
OTU1YFL044C YGL176CP46945 554 aa4.35□□□□□ -1.71
OTU1YFL044C SGM1P47166 707 aa4.35□□□□□ -1.71
OTU1YFL044C ECM16Q04217 1267 aaKnown RBP4.35□□□□□ -1.71
OTU1YFL044C MYO5Q04439 1219 aaKnown RBP4.35□□□□□ -1.71
OTU1YFL044C YLR257WQ06146 321 aaKnown RBP4.35□□□□□ -1.71
OTU1YFL044C HRK1Q08732 759 aaKnown RBP4.35□□□□□ -1.71
OTU1YFL044C ATG11Q12527 1178 aa4.35□□□□□ -1.71
OTU1YFL044C CAN1P04817 590 aa4.34□□□□□ -1.71
OTU1YFL044C MAS2P11914 482 aa4.34□□□□□ -1.71
OTU1YFL044C GAL11P19659 1081 aa4.34□□□□□ -1.71
OTU1YFL044C HSP60P19882 572 aaKnown RBP4.34□□□□□ -1.71
OTU1YFL044C CAD1P24813 409 aaKnown RBP4.34□□□□□ -1.71
OTU1YFL044C PIN4P34217 668 aaKnown RBP RIP-Chip data4.34□□□□□ -1.71not detected
OTU1YFL044C SKI2P35207 1287 aaKnown RBP RIP-Chip data4.34□□□□□ -1.71not detected
OTU1YFL044C CRG1P38892 291 aaRIP-Chip data4.34□□□□□ -1.71not detected
OTU1YFL044C AKR1P39010 764 aa4.34□□□□□ -1.71
OTU1YFL044C YEN1P40028 759 aa4.34□□□□□ -1.71
OTU1YFL044C IRR1P40541 1150 aa4.34□□□□□ -1.71
OTU1YFL044C MPH1P40562 993 aa4.34□□□□□ -1.71
OTU1YFL044C FMS1P50264 508 aa4.34□□□□□ -1.71
OTU1YFL044C VPS72Q03388 795 aa4.34□□□□□ -1.71
OTU1YFL044C SKY1Q03656 742 aa4.34□□□□□ -1.71
OTU1YFL044C UTP14Q04500 899 aaKnown RBP4.34□□□□□ -1.71
OTU1YFL044C YPL066WQ12194 479 aa4.34□□□□□ -1.71
OTU1YFL044C RPS4AP0CX35 261 aaKnown RBP4.33□□□□□ -1.72
OTU1YFL044C RPS4BP0CX36 261 aaKnown RBP4.33□□□□□ -1.72
OTU1YFL044C SBP1P10080 294 aaKnown RBP4.33□□□□□ -1.72
OTU1YFL044C MAK31P23059 88 aa4.33□□□□□ -1.72
OTU1YFL044C FUB1P25659 250 aa4.33□□□□□ -1.72
OTU1YFL044C RME1P32338 300 aaKnown RBP4.33□□□□□ -1.72
OTU1YFL044C COQ2P32378 372 aa4.33□□□□□ -1.72
OTU1YFL044C STB5P38699 743 aa4.33□□□□□ -1.72
OTU1YFL044C CRP1P38845 465 aaKnown RBP4.33□□□□□ -1.72
OTU1YFL044C SKN7P38889 622 aa4.33□□□□□ -1.72
OTU1YFL044C OYE3P41816 400 aaPredicted RBP4.33□□□□□ -1.72
OTU1YFL044C ALT1P52893 592 aa4.33□□□□□ -1.72
OTU1YFL044C RTA1P53047 317 aa4.33□□□□□ -1.72
OTU1YFL044C ERP6P53198 216 aa4.33□□□□□ -1.72
OTU1YFL044C YNL034WP53963 612 aa4.33□□□□□ -1.72
OTU1YFL044C YNL018CP53976 612 aa4.33□□□□□ -1.72
OTU1YFL044C EAF1Q06337 982 aa4.33□□□□□ -1.72
OTU1YFL044C SPN1Q06505 410 aaPredicted RBP4.33□□□□□ -1.72
OTU1YFL044C MCA1Q08601 432 aa4.33□□□□□ -1.72
OTU1YFL044C SPO21Q12411 609 aa4.33□□□□□ -1.72
OTU1YFL044C GLT1Q12680 2145 aaKnown RBP4.33□□□□□ -1.72
OTU1YFL044C PRP9P19736 530 aaKnown RBP4.32□□□□□ -1.72
OTU1YFL044C SRP54P20424 541 aaKnown RBP4.32□□□□□ -1.72
OTU1YFL044C KIN82P25341 720 aa4.32□□□□□ -1.72
OTU1YFL044C ARE1P25628 610 aa4.32□□□□□ -1.72
OTU1YFL044C KIP1P28742 1111 aa4.32□□□□□ -1.72
OTU1YFL044C NAM7P30771 971 aaKnown RBP4.32□□□□□ -1.72
OTU1YFL044C SYN8P31377 255 aa4.32□□□□□ -1.72
OTU1YFL044C GGA2P38817 585 aaKnown RBP4.32□□□□□ -1.72
OTU1YFL044C TVP23P38962 199 aa4.32□□□□□ -1.72
OTU1YFL044C MBP1P39678 833 aa4.32□□□□□ -1.72
OTU1YFL044C HMF1P40037 129 aaKnown RBP4.32□□□□□ -1.72
OTU1YFL044C MMM1P41800 426 aa4.32□□□□□ -1.72
OTU1YFL044C ALG2P43636 503 aa4.32□□□□□ -1.72
OTU1YFL044C PFD1P46988 109 aa4.32□□□□□ -1.72
OTU1YFL044C RPS7BP48164 190 aaKnown RBP4.32□□□□□ -1.72
OTU1YFL044C MET13P53128 600 aa4.32□□□□□ -1.72
OTU1YFL044C YGL081WP53156 320 aa4.32□□□□□ -1.72
OTU1YFL044C MDM1Q01846 1127 aa4.32□□□□□ -1.72
OTU1YFL044C TPP1Q03796 238 aa4.32□□□□□ -1.72
OTU1YFL044C EMI2Q04409 500 aaKnown RBP4.32□□□□□ -1.72
OTU1YFL044C SPP382Q06411 708 aaPredicted RBP4.32□□□□□ -1.72
OTU1YFL044C SUE1Q06524 206 aa4.32□□□□□ -1.72
OTU1YFL044C DSE3Q08729 430 aa4.32□□□□□ -1.72
OTU1YFL044C GNT1Q12096 491 aa4.32□□□□□ -1.72
OTU1YFL044C YLL058WQ12198 575 aa4.32□□□□□ -1.72
OTU1YFL044C NOP14Q99207 810 aaKnown RBP4.32□□□□□ -1.72
OTU1YFL044C RPL8AP17076 256 aaKnown RBP4.31□□□□□ -1.72
OTU1YFL044C TVP38P36164 337 aa4.31□□□□□ -1.72
OTU1YFL044C SAF1P38352 637 aa4.31□□□□□ -1.72
OTU1YFL044C RFC1P38630 861 aaKnown RBP4.31□□□□□ -1.72
OTU1YFL044C NMD3P38861 518 aaKnown RBP4.31□□□□□ -1.72
OTU1YFL044C TPM2P40414 161 aa4.31□□□□□ -1.72
OTU1YFL044C CTR1P49573 406 aa4.31□□□□□ -1.72
OTU1YFL044C ART5P53244 586 aaKnown RBP4.31□□□□□ -1.72
OTU1YFL044C MMR1Q06324 491 aa4.31□□□□□ -1.72
OTU1YFL044C PUF3Q07807 879 aaKnown RBP RIP-Chip data4.31□□□□□ -1.72not detected
OTU1YFL044C YOR059CQ08448 450 aaKnown RBP4.31□□□□□ -1.72
OTU1YFL044C PUS7Q08647 676 aaKnown RBP4.31□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 104.3 ms