RNA–Protein interactions for RNA: YER116C

SLX8, Transcript of Subunit of Slx5-Slx8 SUMO-targeted ubiquitin ligase (STUbL) complex, yeast

Gene SLX8, Length 825 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SLX8	YER116C	PGA3	Q12746	312 aa	Known RBP	4.43	□□□□□ -1.7
SLX8	YER116C	RPS21B	Q3E754	87 aa	Known RBP	4.43	□□□□□ -1.7
SLX8	YER116C	YMR084W	A2P2R3	262 aa		4.42	□□□□□ -1.7
SLX8	YER116C	ADE8	P04161	214 aa		4.42	□□□□□ -1.7
SLX8	YER116C	PDC5	P16467	563 aa	Known RBP	4.42	□□□□□ -1.7
SLX8	YER116C	HOP1	P20050	605 aa		4.42	□□□□□ -1.7
SLX8	YER116C	SEC21	P32074	935 aa	Known RBP	4.42	□□□□□ -1.7
SLX8	YER116C	NGG1	P32494	702 aa		4.42	□□□□□ -1.7
SLX8	YER116C	YLF2	P38746	405 aa		4.42	□□□□□ -1.7
SLX8	YER116C	DUN1	P39009	513 aa		4.42	□□□□□ -1.7
SLX8	YER116C	TOK1	P40310	691 aa		4.42	□□□□□ -1.7
SLX8	YER116C	LTP1	P40347	161 aa		4.42	□□□□□ -1.7
SLX8	YER116C	YJL068C	P40363	299 aa		4.42	□□□□□ -1.7
SLX8	YER116C	YIL092W	P40497	633 aa		4.42	□□□□□ -1.7
SLX8	YER116C	SEC28	P40509	296 aa	Known RBP	4.42	□□□□□ -1.7
SLX8	YER116C	MPH1	P40562	993 aa		4.42	□□□□□ -1.7
SLX8	YER116C	HNT2	P49775	206 aa		4.42	□□□□□ -1.7
SLX8	YER116C	PSP2	P50109	593 aa	Known RBP	4.42	□□□□□ -1.7
SLX8	YER116C	UBC9	P50623	157 aa	Predicted RBP	4.42	□□□□□ -1.7
SLX8	YER116C	SAP4	P53036	818 aa		4.42	□□□□□ -1.7
SLX8	YER116C	ARE2	P53629	642 aa	Known RBP	4.42	□□□□□ -1.7
SLX8	YER116C	HST1	P53685	503 aa		4.42	□□□□□ -1.7
SLX8	YER116C	CPR6	P53691	371 aa	Known RBP	4.42	□□□□□ -1.7
SLX8	YER116C	YNR061C	P53747	219 aa		4.42	□□□□□ -1.7
SLX8	YER116C	HOT1	Q03213	719 aa		4.42	□□□□□ -1.7
SLX8	YER116C	FCP1	Q03254	732 aa		4.42	□□□□□ -1.7
SLX8	YER116C	RMT2	Q03305	412 aa		4.42	□□□□□ -1.7
SLX8	YER116C	NHX1	Q04121	633 aa		4.42	□□□□□ -1.7
SLX8	YER116C	MCH5	Q08777	521 aa		4.42	□□□□□ -1.7
SLX8	YER116C	HAL9	Q12180	1030 aa		4.42	□□□□□ -1.7
SLX8	YER116C	SFI1	Q12369	946 aa		4.42	□□□□□ -1.7
SLX8	YER116C	RRP36	Q12481	300 aa	Predicted RBP	4.42	□□□□□ -1.7
SLX8	YER116C	LEU2	P04173	364 aa	Predicted RBP	4.41	□□□□□ -1.7
SLX8	YER116C	ARG3	P05150	338 aa		4.41	□□□□□ -1.7
SLX8	YER116C	NCP1	P16603	691 aa	Known RBP	4.41	□□□□□ -1.7
SLX8	YER116C	RPC31	P17890	251 aa		4.41	□□□□□ -1.7
SLX8	YER116C	PHO3	P24031	467 aa		4.41	□□□□□ -1.7
SLX8	YER116C	YCL049C	P25577	312 aa		4.41	□□□□□ -1.7
SLX8	YER116C	SWC3	P31376	625 aa		4.41	□□□□□ -1.7
SLX8	YER116C	CCR4	P31384	837 aa	Known RBP	4.41	□□□□□ -1.7
SLX8	YER116C	ERG3	P32353	365 aa		4.41	□□□□□ -1.7
SLX8	YER116C	RPN2	P32565	945 aa	Known RBP	4.41	□□□□□ -1.7
SLX8	YER116C	TFB1	P32776	642 aa		4.41	□□□□□ -1.7
SLX8	YER116C	YKL077W	P36081	392 aa		4.41	□□□□□ -1.7
SLX8	YER116C	FAT1	P38225	669 aa		4.41	□□□□□ -1.7
SLX8	YER116C	EXO5	P38289	585 aa		4.41	□□□□□ -1.7
SLX8	YER116C	GDI1	P39958	451 aa	Known RBP	4.41	□□□□□ -1.7
SLX8	YER116C	YIL165C	P40446	119 aa		4.41	□□□□□ -1.7
SLX8	YER116C	LCB2	P40970	561 aa		4.41	□□□□□ -1.7
SLX8	YER116C	ALF1	P53904	254 aa		4.41	□□□□□ -1.7
SLX8	YER116C	SSL2	Q00578	843 aa		4.41	□□□□□ -1.7
SLX8	YER116C	PEX25	Q02969	394 aa		4.41	□□□□□ -1.7
SLX8	YER116C	SPP382	Q06411	708 aa	Predicted RBP	4.41	□□□□□ -1.7
SLX8	YER116C	TRM8	Q12009	286 aa		4.41	□□□□□ -1.7
SLX8	YER116C	HFI1	Q12060	488 aa		4.41	□□□□□ -1.7
SLX8	YER116C	RVB2	Q12464	471 aa	Known RBP	4.41	□□□□□ -1.7
SLX8	YER116C	MTF2	P10849	440 aa		4.4	□□□□□ -1.71
SLX8	YER116C	THR1	P17423	357 aa	Known RBP	4.4	□□□□□ -1.71
SLX8	YER116C	ATP12	P22135	325 aa		4.4	□□□□□ -1.71
SLX8	YER116C	ADP1	P25371	1049 aa		4.4	□□□□□ -1.71
SLX8	YER116C	SGF29	P25554	259 aa		4.4	□□□□□ -1.71
SLX8	YER116C	GPI10	P30777	616 aa		4.4	□□□□□ -1.71
SLX8	YER116C	SMI1	P32566	505 aa		4.4	□□□□□ -1.71
SLX8	YER116C	OAF3	P36023	863 aa		4.4	□□□□□ -1.71
SLX8	YER116C	IFA38	P38286	347 aa		4.4	□□□□□ -1.71
SLX8	YER116C	RPN10	P38886	268 aa	Known RBP	4.4	□□□□□ -1.71
SLX8	YER116C	YHR202W	P38887	602 aa		4.4	□□□□□ -1.71
SLX8	YER116C	NPR2	P39923	615 aa		4.4	□□□□□ -1.71
SLX8	YER116C	KHA1	P40309	873 aa		4.4	□□□□□ -1.71
SLX8	YER116C	PSF2	P40359	213 aa		4.4	□□□□□ -1.71
SLX8	YER116C	ARF3	P40994	183 aa	RIP-Chip data	4.4	□□□□□ -1.71	not detected
SLX8	YER116C	KEL2	P50090	882 aa		4.4	□□□□□ -1.71
SLX8	YER116C	RRT6	P53117	311 aa	Predicted RBP	4.4	□□□□□ -1.71
SLX8	YER116C	DAM1	P53267	343 aa		4.4	□□□□□ -1.71
SLX8	YER116C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.4	□□□□□ -1.71	RIP-Chip
SLX8	YER116C	CIK1	Q01649	594 aa		4.4	□□□□□ -1.71
SLX8	YER116C	RPT6	Q01939	405 aa	Known RBP	4.4	□□□□□ -1.71
SLX8	YER116C	HOS3	Q02959	697 aa	Known RBP	4.4	□□□□□ -1.71
SLX8	YER116C	ATP25	Q03153	612 aa		4.4	□□□□□ -1.71
SLX8	YER116C	YDR131C	Q03899	556 aa		4.4	□□□□□ -1.71
SLX8	YER116C	TY1A-DR2	Q03964	440 aa	Known RBP	4.4	□□□□□ -1.71
SLX8	YER116C	SNO4	Q04902	237 aa		4.4	□□□□□ -1.71
SLX8	YER116C	YLR345W	Q06137	509 aa		4.4	□□□□□ -1.71
SLX8	YER116C	HSP33	Q08914	237 aa	Known RBP	4.4	□□□□□ -1.71
SLX8	YER116C	HSP32	Q08992	237 aa		4.4	□□□□□ -1.71
SLX8	YER116C	FRE6	Q12473	712 aa		4.4	□□□□□ -1.71
SLX8	YER116C	FUM1	P08417	488 aa	Known RBP	4.39	□□□□□ -1.71
SLX8	YER116C	HSF1	P10961	833 aa		4.39	□□□□□ -1.71
SLX8	YER116C	CBP3	P21560	335 aa		4.39	□□□□□ -1.71
SLX8	YER116C	UBC1	P21734	215 aa	Known RBP	4.39	□□□□□ -1.71
SLX8	YER116C	NPP1	P25353	742 aa		4.39	□□□□□ -1.71
SLX8	YER116C	POL4	P25615	582 aa		4.39	□□□□□ -1.71
SLX8	YER116C	DAL80	P26343	269 aa		4.39	□□□□□ -1.71
SLX8	YER116C	NAM7	P30771	971 aa	Known RBP	4.39	□□□□□ -1.71
SLX8	YER116C	CBF2	P32504	956 aa		4.39	□□□□□ -1.71
SLX8	YER116C	PPQ1	P32945	549 aa		4.39	□□□□□ -1.71
SLX8	YER116C	AFR1	P33304	620 aa		4.39	□□□□□ -1.71
SLX8	YER116C	REC104	P33323	182 aa		4.39	□□□□□ -1.71
SLX8	YER116C	EMC3	P36039	253 aa		4.39	□□□□□ -1.71
SLX8	YER116C	ADD66	P36040	267 aa		4.39	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 76.2 ms