RNA–Protein interactions for RNA: YDR280W

RRP45, Transcript of Exosome non-catalytic core component, yeastyeast

Gene RRP45, Length 918 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP45YDR280W YGL138CP53122 345 aa5.58□□□□□ -1.52
RRP45YDR280W NAM8Q00539 523 aaKnown RBP5.58□□□□□ -1.52
RRP45YDR280W UBP3Q01477 912 aaKnown RBP RIP-Chip data5.58□□□□□ -1.52not detected
RRP45YDR280W ECM23Q02710 187 aa5.58□□□□□ -1.52
RRP45YDR280W HER2Q03557 464 aa5.58□□□□□ -1.52
RRP45YDR280W HEL2Q05580 639 aaKnown RBP5.58□□□□□ -1.52
RRP45YDR280W MOD5P07884 428 aa5.57□□□□□ -1.52
RRP45YDR280W PRP9P19736 530 aaKnown RBP5.57□□□□□ -1.52
RRP45YDR280W PDC6P26263 563 aaKnown RBP5.57□□□□□ -1.52
RRP45YDR280W SLA2P33338 968 aa5.57□□□□□ -1.52
RRP45YDR280W WBP1P33767 430 aaKnown RBP5.57□□□□□ -1.52
RRP45YDR280W SRX1P36077 127 aa5.57□□□□□ -1.52
RRP45YDR280W YKR051WP36142 418 aa5.57□□□□□ -1.52
RRP45YDR280W SIF2P38262 535 aa5.57□□□□□ -1.52
RRP45YDR280W CIC1P38779 376 aaKnown RBP5.57□□□□□ -1.52
RRP45YDR280W PIK1P39104 1066 aa5.57□□□□□ -1.52
RRP45YDR280W VTC2P43585 828 aa5.57□□□□□ -1.52
RRP45YDR280W CAF130P53280 1122 aaPredicted RBP5.57□□□□□ -1.52
RRP45YDR280W RET3P53600 189 aa5.57□□□□□ -1.52
RRP45YDR280W CWC21Q03375 135 aaKnown RBP5.57□□□□□ -1.52
RRP45YDR280W CEF1Q03654 590 aaPredicted RBP5.57□□□□□ -1.52
RRP45YDR280W YDL057WQ07379 328 aa5.57□□□□□ -1.52
RRP45YDR280W HRT3Q12347 344 aa5.57□□□□□ -1.52
RRP45YDR280W REV1P12689 985 aa5.56□□□□□ -1.52
RRP45YDR280W KIN3P22209 435 aa5.56□□□□□ -1.52
RRP45YDR280W VPS3P23643 1011 aa5.56□□□□□ -1.52
RRP45YDR280W STE5P32917 917 aa5.56□□□□□ -1.52
RRP45YDR280W TSA1P34760 196 aaKnown RBP5.56□□□□□ -1.52
RRP45YDR280W MMS4P38257 691 aa5.56□□□□□ -1.52
RRP45YDR280W WSC4P38739 605 aa5.56□□□□□ -1.52
RRP45YDR280W GDH3P39708 457 aa5.56□□□□□ -1.52
RRP45YDR280W VAC8P39968 578 aa5.56□□□□□ -1.52
RRP45YDR280W OSW5P40219 148 aa5.56□□□□□ -1.52
RRP45YDR280W PCI8P40512 444 aa5.56□□□□□ -1.52
RRP45YDR280W DSE4P53753 1117 aa5.56□□□□□ -1.52
RRP45YDR280W NCS2P53923 493 aaPredicted RBP5.56□□□□□ -1.52
RRP45YDR280W SEC5P89102 971 aa5.56□□□□□ -1.52
RRP45YDR280W TRS130Q03660 1102 aa5.56□□□□□ -1.52
RRP45YDR280W SSL1Q04673 461 aaPredicted RBP5.56□□□□□ -1.52
RRP45YDR280W RTK1Q12100 620 aaPredicted RBP5.56□□□□□ -1.52
RRP45YDR280W CTF3Q12748 733 aa5.56□□□□□ -1.52
RRP45YDR280W YGR161W-CQ3E744 92 aa5.56□□□□□ -1.52
RRP45YDR280W TPM1P17536 199 aaKnown RBP5.55□□□□□ -1.52
RRP45YDR280W TEC1P18412 486 aa5.55□□□□□ -1.52
RRP45YDR280W GSY1P23337 708 aa5.55□□□□□ -1.52
RRP45YDR280W PRR1P28708 518 aa5.55□□□□□ -1.52
RRP45YDR280W TRM2P33753 639 aa5.55□□□□□ -1.52
RRP45YDR280W BAT1P38891 393 aaKnown RBP5.55□□□□□ -1.52
RRP45YDR280W AKR1P39010 764 aa5.55□□□□□ -1.52
RRP45YDR280W RPN3P40016 523 aaKnown RBP5.55□□□□□ -1.52
RRP45YDR280W YGL036WP53185 909 aaPredicted RBP5.55□□□□□ -1.52
RRP45YDR280W TDA7P53882 636 aaPredicted RBP5.55□□□□□ -1.52
RRP45YDR280W GIS4Q04233 774 aa5.55□□□□□ -1.52
RRP45YDR280W TPK1P06244 397 aa5.54□□□□□ -1.52
RRP45YDR280W DPB3P27344 201 aa5.54□□□□□ -1.52
RRP45YDR280W MET4P32389 672 aa5.54□□□□□ -1.52
RRP45YDR280W YBR238CP38330 731 aaKnown RBP5.54□□□□□ -1.52
RRP45YDR280W PMC1P38929 1173 aaPredicted RBP5.54□□□□□ -1.52
RRP45YDR280W MAD1P40957 749 aa5.54□□□□□ -1.52
RRP45YDR280W TY4A-JP47023 414 aa5.54□□□□□ -1.52
RRP45YDR280W IML2P47031 731 aa5.54□□□□□ -1.52
RRP45YDR280W NUP84P52891 726 aa5.54□□□□□ -1.52
RRP45YDR280W SHE10P53075 577 aa5.54□□□□□ -1.52
RRP45YDR280W VPS16Q03308 798 aa5.54□□□□□ -1.52
RRP45YDR280W SEG1Q04279 960 aa5.54□□□□□ -1.52
RRP45YDR280W NDJ1Q12366 352 aa5.54□□□□□ -1.52
RRP45YDR280W PGA3Q12746 312 aaKnown RBP5.54□□□□□ -1.52
RRP45YDR280W RIP1P08067 215 aa5.53□□□□□ -1.52
RRP45YDR280W RPL4AP10664 362 aaKnown RBP5.53□□□□□ -1.52
RRP45YDR280W DBP5P20449 482 aaKnown RBP5.53□□□□□ -1.52
RRP45YDR280W VMA4P22203 233 aaKnown RBP5.53□□□□□ -1.52
RRP45YDR280W SEC15P22224 910 aa5.53□□□□□ -1.52
RRP45YDR280W CCR4P31384 837 aaKnown RBP5.53□□□□□ -1.52
RRP45YDR280W MFT1P33441 392 aaKnown RBP5.53□□□□□ -1.52
RRP45YDR280W ERC1P38767 581 aa5.53□□□□□ -1.52
RRP45YDR280W NUP60P39705 539 aa5.53□□□□□ -1.52
RRP45YDR280W YIL161WP40449 235 aaKnown RBP5.53□□□□□ -1.52
RRP45YDR280W ULP2P40537 1034 aaPredicted RBP5.53□□□□□ -1.52
RRP45YDR280W ERG10P41338 398 aaKnown RBP5.53□□□□□ -1.52
RRP45YDR280W RPL4BP49626 362 aaKnown RBP5.53□□□□□ -1.52
RRP45YDR280W YNR065CP53751 1116 aa5.53□□□□□ -1.52
RRP45YDR280W PGA2P53903 129 aa5.53□□□□□ -1.52
RRP45YDR280W SMA1Q02651 245 aa5.53□□□□□ -1.52
RRP45YDR280W SNU56Q03782 492 aaKnown RBP5.53□□□□□ -1.52
RRP45YDR280W TIF35Q04067 274 aaKnown RBP5.53□□□□□ -1.52
RRP45YDR280W FUS2Q05670 677 aa5.53□□□□□ -1.52
RRP45YDR280W NUT2Q06213 157 aa5.53□□□□□ -1.52
RRP45YDR280W YCG1Q06680 1035 aa5.53□□□□□ -1.52
RRP45YDR280W YDL121CQ07541 149 aa5.53□□□□□ -1.52
RRP45YDR280W YIL046W-AQ3E7Z4 54 aa5.53□□□□□ -1.52
RRP45YDR280W YJU3P28321 313 aa5.52□□□□□ -1.53
RRP45YDR280W VPS35P34110 944 aa5.52□□□□□ -1.53
RRP45YDR280W MIC60P36112 540 aa5.52□□□□□ -1.53
RRP45YDR280W YHR054CP38780 354 aa5.52□□□□□ -1.53
RRP45YDR280W ATG3P40344 310 aa5.52□□□□□ -1.53
RRP45YDR280W BUD6P41697 788 aa5.52□□□□□ -1.53
RRP45YDR280W SBE2P42223 864 aaKnown RBP5.52□□□□□ -1.53
RRP45YDR280W NOP13P53883 403 aaKnown RBP RIP-Chip data5.52□□□□□ -1.53not detected
RRP45YDR280W SHS1Q07657 551 aa5.52□□□□□ -1.53
RRP45YDR280W YOR389WQ08912 624 aa5.52□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms