RNA–Protein interactions for RNA: YDR110W

FOB1, Transcript of Nucleolar protein that binds the rDNA replication fork barrier site, yeastyeast

Gene FOB1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
FOB1YDR110W YJR039WP47107 1121 aa5.89□□□□□ -1.47
FOB1YDR110W TRF5P48561 642 aaKnown RBP5.89□□□□□ -1.47
FOB1YDR110W ARC35P53731 342 aaKnown RBP5.89□□□□□ -1.47
FOB1YDR110W VPS9P54787 451 aa5.89□□□□□ -1.47
FOB1YDR110W TOF2Q02208 771 aa5.89□□□□□ -1.47
FOB1YDR110W COG8Q04632 607 aa5.89□□□□□ -1.47
FOB1YDR110W HAL9Q12180 1030 aa5.89□□□□□ -1.47
FOB1YDR110W TAF3Q12297 353 aa5.89□□□□□ -1.47
FOB1YDR110W GLE1Q12315 538 aa5.89□□□□□ -1.47
FOB1YDR110W ISA2Q12425 185 aa5.89□□□□□ -1.47
FOB1YDR110W HSP104P31539 908 aaKnown RBP5.88□□□□□ -1.47
FOB1YDR110W GUT2P32191 649 aa5.88□□□□□ -1.47
FOB1YDR110W RPC82P32349 654 aa5.88□□□□□ -1.47
FOB1YDR110W PUP2P32379 260 aa5.88□□□□□ -1.47
FOB1YDR110W LOT5P34234 306 aa5.88□□□□□ -1.47
FOB1YDR110W MCD4P36051 919 aa5.88□□□□□ -1.47
FOB1YDR110W ECM4P36156 370 aa5.88□□□□□ -1.47
FOB1YDR110W SHM2P37291 469 aaKnown RBP5.88□□□□□ -1.47
FOB1YDR110W SIF2P38262 535 aa5.88□□□□□ -1.47
FOB1YDR110W CKB2P38930 258 aa5.88□□□□□ -1.47
FOB1YDR110W YIR014WP40570 242 aa5.88□□□□□ -1.47
FOB1YDR110W INA22P40576 216 aa5.88□□□□□ -1.47
FOB1YDR110W NCS6P53088 359 aa5.88□□□□□ -1.47
FOB1YDR110W GIM3P53900 129 aa5.88□□□□□ -1.47
FOB1YDR110W YCS4Q06156 1176 aa5.88□□□□□ -1.47
FOB1YDR110W DIB1Q06819 143 aaPredicted RBP5.88□□□□□ -1.47
FOB1YDR110W NBA1Q08229 501 aaKnown RBP5.88□□□□□ -1.47
FOB1YDR110W TMA46Q12000 345 aaKnown RBP5.88□□□□□ -1.47
FOB1YDR110W MDY2Q12285 212 aa5.88□□□□□ -1.47
FOB1YDR110W SNF1P06782 633 aaKnown RBP5.88□□□□□ -1.47
FOB1YDR110W CDC16P09798 840 aa5.88□□□□□ -1.47
FOB1YDR110W TRK1P12685 1235 aa5.88□□□□□ -1.47
FOB1YDR110W GUK1P15454 187 aaKnown RBP5.88□□□□□ -1.47
FOB1YDR110W SFL1P20134 766 aa5.88□□□□□ -1.47
FOB1YDR110W RAD53P22216 821 aa5.88□□□□□ -1.47
FOB1YDR110W DOA4P32571 926 aa5.88□□□□□ -1.47
FOB1YDR110W ILV3P39522 585 aaKnown RBP5.88□□□□□ -1.47
FOB1YDR110W MET12P46151 657 aa5.88□□□□□ -1.47
FOB1YDR110W ENT3P47160 408 aa5.88□□□□□ -1.47
FOB1YDR110W ULP1Q02724 621 aa5.88□□□□□ -1.47
FOB1YDR110W RMT2Q03305 412 aa5.88□□□□□ -1.47
FOB1YDR110W ADI1Q03677 179 aa5.88□□□□□ -1.47
FOB1YDR110W RBA50Q04418 439 aa5.88□□□□□ -1.47
FOB1YDR110W RPN7Q06103 429 aaKnown RBP5.88□□□□□ -1.47
FOB1YDR110W YLL032CQ07834 825 aaKnown RBP RIP-Chip data5.88□□□□□ -1.47not detected
FOB1YDR110W RRT8Q08219 342 aa5.88□□□□□ -1.47
FOB1YDR110W PDH1Q12428 516 aaKnown RBP5.88□□□□□ -1.47
FOB1YDR110W DRS2P39524 1355 aa5.87□□□□□ -1.47
FOB1YDR110W LEU1P07264 779 aaKnown RBP5.87□□□□□ -1.47
FOB1YDR110W COX11P19516 300 aaKnown RBP5.87□□□□□ -1.47
FOB1YDR110W DBP2P24783 546 aaKnown RBP5.87□□□□□ -1.47
FOB1YDR110W ITR1P30605 584 aa5.87□□□□□ -1.47
FOB1YDR110W HBS1P32769 611 aaKnown RBP5.87□□□□□ -1.47
FOB1YDR110W GYP6P32806 458 aa5.87□□□□□ -1.47
FOB1YDR110W SUR1P33300 382 aa5.87□□□□□ -1.47
FOB1YDR110W SLC1P33333 303 aa5.87□□□□□ -1.47
FOB1YDR110W RRM3P38766 723 aa5.87□□□□□ -1.47
FOB1YDR110W PIH1P38768 344 aa5.87□□□□□ -1.47
FOB1YDR110W GZF3P42944 551 aaKnown RBP5.87□□□□□ -1.47
FOB1YDR110W MNN11P46985 422 aaKnown RBP5.87□□□□□ -1.47
FOB1YDR110W LSC1P53598 329 aaKnown RBP5.87□□□□□ -1.47
FOB1YDR110W CIK1Q01649 594 aa5.87□□□□□ -1.47
FOB1YDR110W YCG1Q06680 1035 aa5.87□□□□□ -1.47
FOB1YDR110W YOR238WQ08634 303 aa5.87□□□□□ -1.47
FOB1YDR110W NSI1Q12457 570 aa5.87□□□□□ -1.47
FOB1YDR110W YER152CP10356 443 aa5.86□□□□□ -1.47
FOB1YDR110W ENA1P13587 1091 aa5.86□□□□□ -1.47
FOB1YDR110W PFK2P16862 959 aaKnown RBP RIP-Chip data5.86□□□□□ -1.47not detected
FOB1YDR110W GSY1P23337 708 aa5.86□□□□□ -1.47
FOB1YDR110W STE50P25344 346 aa5.86□□□□□ -1.47
FOB1YDR110W SPB1P25582 841 aaPredicted RBP5.86□□□□□ -1.47
FOB1YDR110W YUH1P35127 236 aa5.86□□□□□ -1.47
FOB1YDR110W MTG2P38860 518 aa5.86□□□□□ -1.47
FOB1YDR110W RGA1P39083 1007 aa5.86□□□□□ -1.47
FOB1YDR110W SAH1P39954 449 aaKnown RBP5.86□□□□□ -1.47
FOB1YDR110W FET5P43561 622 aa5.86□□□□□ -1.47
FOB1YDR110W ZIP2P53061 704 aa5.86□□□□□ -1.47
FOB1YDR110W YNR061CP53747 219 aa5.86□□□□□ -1.47
FOB1YDR110W TOF1P53840 1238 aa5.86□□□□□ -1.47
FOB1YDR110W ENA2Q01896 1091 aa5.86□□□□□ -1.47
FOB1YDR110W OAZ1Q02803 292 aa5.86□□□□□ -1.47
FOB1YDR110W MSH6Q03834 1242 aa5.86□□□□□ -1.47
FOB1YDR110W RSF1Q05043 376 aa5.86□□□□□ -1.47
FOB1YDR110W TY3A-GQ12173 290 aa5.86□□□□□ -1.47
FOB1YDR110W BUG1Q12191 341 aa5.86□□□□□ -1.47
FOB1YDR110W PSY3Q12318 242 aa5.86□□□□□ -1.47
FOB1YDR110W ENA5Q12691 1091 aa5.86□□□□□ -1.47
FOB1YDR110W TY3A-IQ99219 290 aa5.86□□□□□ -1.47
FOB1YDR110W ADE8P04161 214 aa5.85□□□□□ -1.47
FOB1YDR110W SER1P33330 395 aaKnown RBP5.85□□□□□ -1.47
FOB1YDR110W REI1P38344 393 aaPredicted RBP5.85□□□□□ -1.47
FOB1YDR110W XKS1P42826 600 aa5.85□□□□□ -1.47
FOB1YDR110W SGF73P53165 657 aa5.85□□□□□ -1.47
FOB1YDR110W SNF12P53628 566 aa5.85□□□□□ -1.47
FOB1YDR110W CNM67P53865 581 aaKnown RBP5.85□□□□□ -1.47
FOB1YDR110W YML119WQ03208 357 aa5.85□□□□□ -1.47
FOB1YDR110W VBA4Q04602 768 aaKnown RBP5.85□□□□□ -1.47
FOB1YDR110W AIM32Q04689 311 aa5.85□□□□□ -1.47
FOB1YDR110W HDA3Q06623 655 aa5.85□□□□□ -1.47
FOB1YDR110W YOR019WQ99248 730 aa5.85□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 9.7 ms