RNA–Protein interactions for RNA: YCL054W

SPB1, Transcript of AdoMet-dependent methyltransferase, yeast

Gene SPB1, Length 2,526 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPB1	YCL054W	URA1	P28272	314 aa	Predicted RBP	3.11	□□□□□ -1.91
SPB1	YCL054W	RPN12	P32496	274 aa		3.11	□□□□□ -1.91
SPB1	YCL054W	NFU1	P32860	256 aa		3.11	□□□□□ -1.91
SPB1	YCL054W	POL12	P38121	705 aa	Predicted RBP	3.11	□□□□□ -1.91
SPB1	YCL054W	ECM21	P38167	1117 aa	Known RBP	3.11	□□□□□ -1.91
SPB1	YCL054W	RRT14	P40470	206 aa		3.11	□□□□□ -1.91
SPB1	YCL054W	ALY2	P47029	1046 aa		3.11	□□□□□ -1.91
SPB1	YCL054W	SLD3	P53135	668 aa		3.11	□□□□□ -1.91
SPB1	YCL054W	ENA2	Q01896	1091 aa		3.11	□□□□□ -1.91
SPB1	YCL054W	LEE1	Q02799	301 aa	Known RBP	3.11	□□□□□ -1.91
SPB1	YCL054W	HRK1	Q08732	759 aa	Known RBP	3.11	□□□□□ -1.91
SPB1	YCL054W	YOL114C	Q12322	202 aa		3.11	□□□□□ -1.91
SPB1	YCL054W	RIB2	Q12362	591 aa	Known RBP	3.11	□□□□□ -1.91
SPB1	YCL054W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	3.11	□□□□□ -1.91	not detected
SPB1	YCL054W	ENA5	Q12691	1091 aa		3.11	□□□□□ -1.91
SPB1	YCL054W	RPS4A	P0CX35	261 aa	Known RBP	3.11	□□□□□ -1.91
SPB1	YCL054W	RPS4B	P0CX36	261 aa	Known RBP	3.11	□□□□□ -1.91
SPB1	YCL054W	YKU70	P32807	602 aa		3.11	□□□□□ -1.91
SPB1	YCL054W	MRS6	P32864	603 aa	Known RBP	3.11	□□□□□ -1.91
SPB1	YCL054W	YKR018C	P36114	725 aa		3.11	□□□□□ -1.91
SPB1	YCL054W	YAP1801	P38856	637 aa		3.11	□□□□□ -1.91
SPB1	YCL054W	PIK1	P39104	1066 aa		3.11	□□□□□ -1.91
SPB1	YCL054W	VPS27	P40343	622 aa	Known RBP	3.11	□□□□□ -1.91
SPB1	YCL054W	SDH1	Q00711	640 aa		3.11	□□□□□ -1.91
SPB1	YCL054W	GIR2	Q03768	265 aa	Predicted RBP	3.11	□□□□□ -1.91
SPB1	YCL054W	YPR027C	Q12079	277 aa		3.11	□□□□□ -1.91
SPB1	YCL054W	HOP1	P20050	605 aa		3.1	□□□□□ -1.91
SPB1	YCL054W	RPD3	P32561	433 aa		3.1	□□□□□ -1.91
SPB1	YCL054W	MAL31	P38156	614 aa		3.1	□□□□□ -1.91
SPB1	YCL054W	RIM4	P38741	713 aa		3.1	□□□□□ -1.91
SPB1	YCL054W	SAP185	P40856	1058 aa		3.1	□□□□□ -1.91
SPB1	YCL054W	PUS4	P48567	403 aa	Known RBP	3.1	□□□□□ -1.91
SPB1	YCL054W	NOG2	P53742	486 aa	Known RBP	3.1	□□□□□ -1.91
SPB1	YCL054W	PSR2	Q07949	397 aa		3.1	□□□□□ -1.91
SPB1	YCL054W	HAL9	Q12180	1030 aa		3.1	□□□□□ -1.91
SPB1	YCL054W	GPR1	Q12361	961 aa		3.1	□□□□□ -1.91
SPB1	YCL054W	FBP1	P09201	348 aa		3.1	□□□□□ -1.91
SPB1	YCL054W	CYS3	P31373	394 aa	Known RBP	3.1	□□□□□ -1.91
SPB1	YCL054W	SSH4	P32343	579 aa		3.1	□□□□□ -1.91
SPB1	YCL054W	SSZ1	P38788	538 aa	Known RBP	3.1	□□□□□ -1.91
SPB1	YCL054W	RPN10	P38886	268 aa	Known RBP	3.1	□□□□□ -1.91
SPB1	YCL054W	YFR016C	P43597	1233 aa	Known RBP	3.1	□□□□□ -1.91
SPB1	YCL054W	BNA1	P47096	177 aa		3.1	□□□□□ -1.91
SPB1	YCL054W	BNA2	P47125	453 aa		3.1	□□□□□ -1.91
SPB1	YCL054W	BRE5	P53741	515 aa	Known RBP	3.1	□□□□□ -1.91
SPB1	YCL054W	YHM2	Q04013	314 aa		3.1	□□□□□ -1.91
SPB1	YCL054W	ENT2	Q05785	613 aa		3.1	□□□□□ -1.91
SPB1	YCL054W	YVC1	Q12324	675 aa		3.1	□□□□□ -1.91
SPB1	YCL054W	RAV1	P47104	1357 aa		3.09	□□□□□ -1.91
SPB1	YCL054W	SWI6	P09959	803 aa		3.09	□□□□□ -1.91
SPB1	YCL054W	HSC82	P15108	705 aa	Known RBP	3.09	□□□□□ -1.91
SPB1	YCL054W	PFK1	P16861	987 aa	Known RBP	3.09	□□□□□ -1.91
SPB1	YCL054W	MCM10	P32354	571 aa		3.09	□□□□□ -1.91
SPB1	YCL054W	STE13	P33894	931 aa		3.09	□□□□□ -1.91
SPB1	YCL054W	PTH2	P34222	208 aa		3.09	□□□□□ -1.91
SPB1	YCL054W	NOC2	P39744	710 aa	Known RBP	3.09	□□□□□ -1.91
SPB1	YCL054W	EAF5	P39995	279 aa		3.09	□□□□□ -1.91
SPB1	YCL054W	EMP65	P40085	556 aa		3.09	□□□□□ -1.91
SPB1	YCL054W	HLR1	Q04429	423 aa		3.09	□□□□□ -1.91
SPB1	YCL054W	OMS1	Q06668	471 aa		3.09	□□□□□ -1.91
SPB1	YCL054W	CFT1	Q06632	1357 aa	Known RBP	3.09	□□□□□ -1.92
SPB1	YCL054W	NOT3	P06102	836 aa	Known RBP	3.09	□□□□□ -1.92
SPB1	YCL054W	GFA1	P14742	717 aa	Known RBP	3.09	□□□□□ -1.92
SPB1	YCL054W	SEC18	P18759	758 aa	Known RBP	3.09	□□□□□ -1.92
SPB1	YCL054W	SEC65	P29478	273 aa		3.09	□□□□□ -1.92
SPB1	YCL054W	TOA1	P32773	286 aa		3.09	□□□□□ -1.92
SPB1	YCL054W	BEM3	P32873	1128 aa		3.09	□□□□□ -1.92
SPB1	YCL054W	DOT6	P40059	670 aa	Known RBP	3.09	□□□□□ -1.92
SPB1	YCL054W	IRC5	P43610	853 aa		3.09	□□□□□ -1.92
SPB1	YCL054W	YJR039W	P47107	1121 aa		3.09	□□□□□ -1.92
SPB1	YCL054W	YKR011C	Q02209	353 aa		3.09	□□□□□ -1.92
SPB1	YCL054W	SSL1	Q04673	461 aa	Predicted RBP	3.09	□□□□□ -1.92
SPB1	YCL054W	YDR056C	Q12025	205 aa		3.09	□□□□□ -1.92
SPB1	YCL054W	BCK1	Q01389	1478 aa		3.08	□□□□□ -1.92
SPB1	YCL054W	RAD9	P14737	1309 aa		3.08	□□□□□ -1.92
SPB1	YCL054W	GLN4	P13188	809 aa	Known RBP	3.08	□□□□□ -1.92
SPB1	YCL054W	PET309	P32522	965 aa	Predicted RBP	3.08	□□□□□ -1.92
SPB1	YCL054W	SHM2	P37291	469 aa	Known RBP	3.08	□□□□□ -1.92
SPB1	YCL054W	BEM4	P39011	633 aa		3.08	□□□□□ -1.92
SPB1	YCL054W	CEP3	P40969	608 aa		3.08	□□□□□ -1.92
SPB1	YCL054W	MMM1	P41800	426 aa		3.08	□□□□□ -1.92
SPB1	YCL054W	PAP2	P53632	584 aa	Known RBP	3.08	□□□□□ -1.92
SPB1	YCL054W	RPN7	Q06103	429 aa	Known RBP	3.08	□□□□□ -1.92
SPB1	YCL054W	TFC6	Q06339	672 aa		3.08	□□□□□ -1.92
SPB1	YCL054W	RSC58	Q07979	502 aa		3.08	□□□□□ -1.92
SPB1	YCL054W	YOR022C	Q12204	715 aa		3.08	□□□□□ -1.92
SPB1	YCL054W	DIF1	O13577	133 aa		3.08	□□□□□ -1.92
SPB1	YCL054W	MSM1	P22438	575 aa		3.08	□□□□□ -1.92
SPB1	YCL054W	FLR1	P38124	548 aa		3.08	□□□□□ -1.92
SPB1	YCL054W	SPC72	P39723	622 aa		3.08	□□□□□ -1.92
SPB1	YCL054W	CIT3	P43635	486 aa		3.08	□□□□□ -1.92
SPB1	YCL054W	UBA2	P52488	636 aa		3.08	□□□□□ -1.92
SPB1	YCL054W	ZIP2	P53061	704 aa		3.08	□□□□□ -1.92
SPB1	YCL054W	MEP3	P53390	489 aa		3.08	□□□□□ -1.92
SPB1	YCL054W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	3.08	□□□□□ -1.92	not detected
SPB1	YCL054W	VPS30	Q02948	557 aa		3.08	□□□□□ -1.92
SPB1	YCL054W	CRR1	Q05790	422 aa		3.08	□□□□□ -1.92
SPB1	YCL054W	YPR196W	Q06595	470 aa		3.08	□□□□□ -1.92
SPB1	YCL054W	RTC1	Q08281	1341 aa		3.07	□□□□□ -1.92
SPB1	YCL054W	RNQ1	P25367	405 aa		3.07	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 19.3 ms