RNA–Protein interactions for RNA: YBR170C

NPL4, Transcript of Substrate-recruiting cofactor of the Cdc48p-Npl4p-Ufd1p segregase, yeastyeast

Gene NPL4, Length 1,743 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NPL4YBR170C MNT3P40549 630 aa5.06□□□□□ -1.6
NPL4YBR170C MSC2Q03455 724 aa5.06□□□□□ -1.6
NPL4YBR170C CDA1Q06702 301 aa5.06□□□□□ -1.6
NPL4YBR170C CWC2Q12046 339 aaPredicted RBP5.06□□□□□ -1.6
NPL4YBR170C HSF1P10961 833 aa5.06□□□□□ -1.6
NPL4YBR170C PHO3P24031 467 aa5.06□□□□□ -1.6
NPL4YBR170C APL1P27351 700 aa5.06□□□□□ -1.6
NPL4YBR170C AIM26P32858 118 aa5.06□□□□□ -1.6
NPL4YBR170C AIM3P38266 947 aaKnown RBP5.06□□□□□ -1.6
NPL4YBR170C MIP6P38760 659 aaKnown RBP5.06□□□□□ -1.6
NPL4YBR170C EAF5P39995 279 aa5.06□□□□□ -1.6
NPL4YBR170C PUS4P48567 403 aaKnown RBP5.06□□□□□ -1.6
NPL4YBR170C YGR012WP53206 393 aa5.06□□□□□ -1.6
NPL4YBR170C NOP15P53927 220 aaPredicted RBP5.06□□□□□ -1.6
NPL4YBR170C GPD1Q00055 391 aaKnown RBP5.06□□□□□ -1.6
NPL4YBR170C LEE1Q02799 301 aaKnown RBP5.06□□□□□ -1.6
NPL4YBR170C GSF2Q04697 403 aaKnown RBP5.06□□□□□ -1.6
NPL4YBR170C YLR407WQ06070 228 aa5.06□□□□□ -1.6
NPL4YBR170C NGL1Q08213 363 aaKnown RBP5.06□□□□□ -1.6
NPL4YBR170C ARP7Q12406 477 aa5.06□□□□□ -1.6
NPL4YBR170C SPS1P08458 490 aa5.05□□□□□ -1.6
NPL4YBR170C HXT4P32467 576 aa5.05□□□□□ -1.6
NPL4YBR170C YKR075CP36155 307 aa5.05□□□□□ -1.6
NPL4YBR170C SHM2P37291 469 aaKnown RBP5.05□□□□□ -1.6
NPL4YBR170C AKL1P38080 1108 aaKnown RBP5.05□□□□□ -1.6
NPL4YBR170C SRP68P38687 599 aaKnown RBP5.05□□□□□ -1.6
NPL4YBR170C SAW1P39735 261 aa5.05□□□□□ -1.6
NPL4YBR170C HOS4P40480 1083 aa5.05□□□□□ -1.6
NPL4YBR170C IRC5P43610 853 aa5.05□□□□□ -1.6
NPL4YBR170C SIZ1Q04195 904 aa5.05□□□□□ -1.6
NPL4YBR170C BLS1Q06071 122 aa5.05□□□□□ -1.6
NPL4YBR170C RTP1Q12751 981 aa5.05□□□□□ -1.6
NPL4YBR170C GFA1P14742 717 aaKnown RBP5.04□□□□□ -1.6
NPL4YBR170C PSY4P38193 441 aa5.04□□□□□ -1.6
NPL4YBR170C STL1P39932 569 aa5.04□□□□□ -1.6
NPL4YBR170C OPY2Q06810 360 aa5.04□□□□□ -1.6
NPL4YBR170C YDR056CQ12025 205 aa5.04□□□□□ -1.6
NPL4YBR170C KCS1Q12494 1050 aa5.04□□□□□ -1.6
NPL4YBR170C KIN2P13186 1147 aaKnown RBP5.03□□□□□ -1.6
NPL4YBR170C CHS3P29465 1165 aa5.03□□□□□ -1.6
NPL4YBR170C YHR202WP38887 602 aa5.03□□□□□ -1.6
NPL4YBR170C IES1P43579 692 aa5.03□□□□□ -1.6
NPL4YBR170C SSY5P47002 699 aa5.03□□□□□ -1.6
NPL4YBR170C RIM8P53179 542 aa5.03□□□□□ -1.6
NPL4YBR170C MTD1Q02046 320 aaKnown RBP5.03□□□□□ -1.6
NPL4YBR170C LPX1Q12405 387 aaKnown RBP5.03□□□□□ -1.6
NPL4YBR170C RPS17AP02407 136 aaKnown RBP5.03□□□□□ -1.6
NPL4YBR170C RPS17BP14127 136 aaKnown RBP5.03□□□□□ -1.6
NPL4YBR170C SDS22P36047 338 aa5.03□□□□□ -1.6
NPL4YBR170C PTC7P38797 343 aa5.03□□□□□ -1.6
NPL4YBR170C MEP3P53390 489 aa5.03□□□□□ -1.6
NPL4YBR170C PSF3Q12146 194 aa5.03□□□□□ -1.6
NPL4YBR170C SSM4P40318 1319 aa5.02□□□□□ -1.61
NPL4YBR170C CMP2P14747 604 aa5.02□□□□□ -1.61
NPL4YBR170C MF(ALPHA)2P32435 120 aa5.02□□□□□ -1.61
NPL4YBR170C CTF8P38877 133 aa5.02□□□□□ -1.61
NPL4YBR170C SPC72P39723 622 aa5.02□□□□□ -1.61
NPL4YBR170C ZRG8P40021 1076 aa5.02□□□□□ -1.61
NPL4YBR170C SCS2P40075 244 aaKnown RBP5.02□□□□□ -1.61
NPL4YBR170C GTS1P40956 396 aa5.02□□□□□ -1.61
NPL4YBR170C MRPL22P53881 309 aa5.02□□□□□ -1.61
NPL4YBR170C RSM24Q03976 319 aa5.02□□□□□ -1.61
NPL4YBR170C CLF1Q12309 687 aaPredicted RBP5.02□□□□□ -1.61
NPL4YBR170C GPR1Q12361 961 aa5.02□□□□□ -1.61
NPL4YBR170C INH1P01097 85 aa5.01□□□□□ -1.61
NPL4YBR170C ADH4P10127 382 aa5.01□□□□□ -1.61
NPL4YBR170C IMG2P25642 146 aaPredicted RBP5.01□□□□□ -1.61
NPL4YBR170C NGG1P32494 702 aa5.01□□□□□ -1.61
NPL4YBR170C TGL1P34163 548 aa5.01□□□□□ -1.61
NPL4YBR170C APM3P38153 483 aa5.01□□□□□ -1.61
NPL4YBR170C TMA108P40462 946 aa5.01□□□□□ -1.61
NPL4YBR170C SET2P46995 733 aaKnown RBP5.01□□□□□ -1.61
NPL4YBR170C MAD3P47074 515 aa5.01□□□□□ -1.61
NPL4YBR170C YMR210WQ03649 449 aa5.01□□□□□ -1.61
NPL4YBR170C ASM4Q05166 528 aa5.01□□□□□ -1.61
NPL4YBR170C YPS7Q06325 596 aa5.01□□□□□ -1.61
NPL4YBR170C YEL076C-AP0CX16 216 aa5□□□□□ -1.61
NPL4YBR170C YLR464WP0CX17 216 aa5□□□□□ -1.61
NPL4YBR170C ACO1P19414 778 aaKnown RBP RIP-Chip data5□□□□□ -1.61not detected
NPL4YBR170C RER1P25560 188 aa5□□□□□ -1.61
NPL4YBR170C DGR2P32330 852 aa5□□□□□ -1.61
NPL4YBR170C IMP2'P32351 346 aa5□□□□□ -1.61
NPL4YBR170C RRN3P36070 627 aa5□□□□□ -1.61
NPL4YBR170C YEL076CP39971 216 aa5□□□□□ -1.61
NPL4YBR170C NDE1P40215 560 aa5□□□□□ -1.61
NPL4YBR170C SDP1P40479 209 aa5□□□□□ -1.61
NPL4YBR170C MTR3P48240 250 aaPredicted RBP5□□□□□ -1.61
NPL4YBR170C ARC35P53731 342 aaKnown RBP5□□□□□ -1.61
NPL4YBR170C YMR018WQ04364 514 aa5□□□□□ -1.61
NPL4YBR170C NFU1P32860 256 aa5□□□□□ -1.61
NPL4YBR170C YHR078WP38799 552 aa5□□□□□ -1.61
NPL4YBR170C SWD1P39706 426 aa5□□□□□ -1.61
NPL4YBR170C PSP2P50109 593 aaKnown RBP5□□□□□ -1.61
NPL4YBR170C ORC4P54791 529 aa5□□□□□ -1.61
NPL4YBR170C MED1Q12321 566 aa5□□□□□ -1.61
NPL4YBR170C ERP4Q12450 207 aa5□□□□□ -1.61
NPL4YBR170C VAS1P07806 1104 aaKnown RBP4.99□□□□□ -1.61
NPL4YBR170C SPE1P08432 466 aa4.99□□□□□ -1.61
NPL4YBR170C JNM1P36224 373 aa4.99□□□□□ -1.61
NPL4YBR170C APN2P38207 520 aa4.99□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 9.5 ms