RNA–Protein interactions for RNA: YOR116C

RPO31, Transcript of RNA polymerase III largest subunit C160, yeast

Gene RPO31, Length 4,383 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPO31	YOR116C	YKR015C	P36111	568 aa		3.99	□□□□□ -1.77
RPO31	YOR116C	HAL5	P38970	855 aa	Known RBP	3.99	□□□□□ -1.77
RPO31	YOR116C	VID27	P40157	782 aa		3.99	□□□□□ -1.77
RPO31	YOR116C	SNL1	P40548	159 aa		3.99	□□□□□ -1.77
RPO31	YOR116C	USA1	Q03714	838 aa		3.99	□□□□□ -1.77
RPO31	YOR116C	SPN1	Q06505	410 aa	Predicted RBP	3.99	□□□□□ -1.77
RPO31	YOR116C	CMS1	Q07897	291 aa	Known RBP	3.99	□□□□□ -1.77
RPO31	YOR116C	RED1	P14291	827 aa		3.99	□□□□□ -1.77
RPO31	YOR116C	RAD51	P25454	400 aa		3.99	□□□□□ -1.77
RPO31	YOR116C	KTR1	P27810	393 aa	Known RBP	3.99	□□□□□ -1.77
RPO31	YOR116C	SEC66	P33754	206 aa		3.99	□□□□□ -1.77
RPO31	YOR116C	TBS1	P38114	1094 aa		3.99	□□□□□ -1.77
RPO31	YOR116C	ECM21	P38167	1117 aa	Known RBP	3.99	□□□□□ -1.77
RPO31	YOR116C	HXT13	P39924	564 aa		3.99	□□□□□ -1.77
RPO31	YOR116C	YJR142W	P47173	342 aa		3.99	□□□□□ -1.77
RPO31	YOR116C	YML108W	Q03759	105 aa		3.99	□□□□□ -1.77
RPO31	YOR116C	PGC1	Q08959	321 aa		3.99	□□□□□ -1.77
RPO31	YOR116C	PDC5	P16467	563 aa	Known RBP	3.99	□□□□□ -1.77
RPO31	YOR116C	NAM7	P30771	971 aa	Known RBP	3.99	□□□□□ -1.77
RPO31	YOR116C	ELM1	P32801	640 aa		3.99	□□□□□ -1.77
RPO31	YOR116C	COY1	P34237	679 aa		3.99	□□□□□ -1.77
RPO31	YOR116C	ECM4	P36156	370 aa		3.99	□□□□□ -1.77
RPO31	YOR116C	YBP1	P38315	674 aa		3.99	□□□□□ -1.77
RPO31	YOR116C	POP4	P38336	279 aa		3.99	□□□□□ -1.77
RPO31	YOR116C	TPS3	P38426	1054 aa	Known RBP	3.99	□□□□□ -1.77
RPO31	YOR116C	JJJ2	P46997	583 aa		3.99	□□□□□ -1.77
RPO31	YOR116C	KRE28	Q04431	385 aa		3.99	□□□□□ -1.77
RPO31	YOR116C	COS7	Q07788	383 aa		3.99	□□□□□ -1.77
RPO31	YOR116C	VPS54	Q12071	889 aa		3.99	□□□□□ -1.77
RPO31	YOR116C	SLP1	Q12232	587 aa		3.99	□□□□□ -1.77
RPO31	YOR116C	SCM3	Q12334	223 aa		3.99	□□□□□ -1.77
RPO31	YOR116C	TY1B-A	O13527	1196 aa	Known RBP	3.98	□□□□□ -1.77
RPO31	YOR116C	SEC23	P15303	768 aa	Known RBP	3.98	□□□□□ -1.77
RPO31	YOR116C	SEN2	P16658	377 aa		3.98	□□□□□ -1.77
RPO31	YOR116C	HCS1	P34243	683 aa		3.98	□□□□□ -1.77
RPO31	YOR116C	ERG7	P38604	731 aa		3.98	□□□□□ -1.77
RPO31	YOR116C	RGA1	P39083	1007 aa		3.98	□□□□□ -1.77
RPO31	YOR116C	RPA34	P47006	233 aa	Predicted RBP	3.98	□□□□□ -1.77
RPO31	YOR116C	NPA3	P47122	385 aa		3.98	□□□□□ -1.77
RPO31	YOR116C	SRB7	P47822	140 aa		3.98	□□□□□ -1.77
RPO31	YOR116C	UPF3	P48412	387 aa	Known RBP	3.98	□□□□□ -1.77
RPO31	YOR116C	RPS12	P48589	143 aa	Known RBP	3.98	□□□□□ -1.77
RPO31	YOR116C	ATP22	P50273	684 aa	Predicted RBP	3.98	□□□□□ -1.77
RPO31	YOR116C	IPI3	P53877	555 aa		3.98	□□□□□ -1.77
RPO31	YOR116C	FAP1	P53971	965 aa		3.98	□□□□□ -1.77
RPO31	YOR116C	HPT1	Q04178	221 aa	Known RBP	3.98	□□□□□ -1.77
RPO31	YOR116C	DDP1	Q99321	188 aa	Known RBP	3.98	□□□□□ -1.77
RPO31	YOR116C	HEM1	P09950	548 aa	Predicted RBP	3.98	□□□□□ -1.77
RPO31	YOR116C	RAD53	P22216	821 aa		3.98	□□□□□ -1.77
RPO31	YOR116C	URA1	P28272	314 aa	Predicted RBP	3.98	□□□□□ -1.77
RPO31	YOR116C	RME1	P32338	300 aa	Known RBP	3.98	□□□□□ -1.77
RPO31	YOR116C	RIC1	P40395	1056 aa		3.98	□□□□□ -1.77
RPO31	YOR116C	EMC2	P47133	292 aa	Known RBP	3.98	□□□□□ -1.77
RPO31	YOR116C	YPT11	P48559	417 aa		3.98	□□□□□ -1.77
RPO31	YOR116C	RFX1	P48743	811 aa		3.98	□□□□□ -1.77
RPO31	YOR116C	FOL1	P53848	824 aa		3.98	□□□□□ -1.77
RPO31	YOR116C	SSL2	Q00578	843 aa		3.98	□□□□□ -1.77
RPO31	YOR116C	YML082W	Q04533	649 aa	Known RBP	3.98	□□□□□ -1.77
RPO31	YOR116C	FAR8	Q05040	523 aa		3.98	□□□□□ -1.77
RPO31	YOR116C	YLR225C	Q05948	407 aa	Known RBP	3.98	□□□□□ -1.77
RPO31	YOR116C	VPS74	Q06385	345 aa		3.98	□□□□□ -1.77
RPO31	YOR116C	CTI6	Q08923	506 aa		3.98	□□□□□ -1.77
RPO31	YOR116C	ATP4	P05626	244 aa		3.98	□□□□□ -1.77
RPO31	YOR116C	CHS3	P29465	1165 aa		3.98	□□□□□ -1.77
RPO31	YOR116C	BMH2	P34730	273 aa	Known RBP	3.98	□□□□□ -1.77
RPO31	YOR116C	OCT1	P35999	772 aa		3.98	□□□□□ -1.77
RPO31	YOR116C	GIP1	P38229	639 aa		3.98	□□□□□ -1.77
RPO31	YOR116C	GPB2	P39717	880 aa		3.98	□□□□□ -1.77
RPO31	YOR116C	VHR2	P40041	505 aa		3.98	□□□□□ -1.77
RPO31	YOR116C	SER3	P40054	469 aa		3.98	□□□□□ -1.77
RPO31	YOR116C	FAR3	P46671	204 aa		3.98	□□□□□ -1.77
RPO31	YOR116C	CUL3	P53202	744 aa		3.98	□□□□□ -1.77
RPO31	YOR116C	RPT4	P53549	437 aa	Known RBP	3.98	□□□□□ -1.77
RPO31	YOR116C	SHR3	Q02774	210 aa		3.98	□□□□□ -1.77
RPO31	YOR116C	SPO77	Q06134	477 aa		3.98	□□□□□ -1.77
RPO31	YOR116C	UBP13	P38187	747 aa		3.98	□□□□□ -1.77
RPO31	YOR116C	MED8	P38304	223 aa		3.98	□□□□□ -1.77
RPO31	YOR116C	RPN3	P40016	523 aa	Known RBP	3.98	□□□□□ -1.77
RPO31	YOR116C	YJL070C	P40361	888 aa		3.98	□□□□□ -1.77
RPO31	YOR116C	URC2	Q04411	772 aa		3.98	□□□□□ -1.77
RPO31	YOR116C	ALR1	Q08269	859 aa		3.98	□□□□□ -1.77
RPO31	YOR116C	CPA2	P03965	1118 aa	Known RBP	3.97	□□□□□ -1.77
RPO31	YOR116C	SEC18	P18759	758 aa	Known RBP	3.97	□□□□□ -1.77
RPO31	YOR116C	SPB1	P25582	841 aa	Predicted RBP	3.97	□□□□□ -1.77
RPO31	YOR116C	DBF4	P32325	704 aa		3.97	□□□□□ -1.77
RPO31	YOR116C	NDI1	P32340	513 aa		3.97	□□□□□ -1.77
RPO31	YOR116C	TOM20	P35180	183 aa		3.97	□□□□□ -1.77
RPO31	YOR116C	AAP1	P37898	856 aa	Known RBP	3.97	□□□□□ -1.77
RPO31	YOR116C	NUP60	P39705	539 aa		3.97	□□□□□ -1.77
RPO31	YOR116C	RPT2	P40327	437 aa	Known RBP	3.97	□□□□□ -1.77
RPO31	YOR116C	EPS1	P40557	701 aa		3.97	□□□□□ -1.77
RPO31	YOR116C	IES1	P43579	692 aa		3.97	□□□□□ -1.77
RPO31	YOR116C	IRC8	P47046	822 aa		3.97	□□□□□ -1.77
RPO31	YOR116C	TMA22	P47089	198 aa	Predicted RBP	3.97	□□□□□ -1.77
RPO31	YOR116C	YML6	P51998	286 aa		3.97	□□□□□ -1.77
RPO31	YOR116C	TAF6	P53040	516 aa		3.97	□□□□□ -1.77
RPO31	YOR116C	MAL11	P53048	616 aa		3.97	□□□□□ -1.77
RPO31	YOR116C	HOT1	Q03213	719 aa		3.97	□□□□□ -1.77
RPO31	YOR116C	FMP40	Q08968	688 aa	Predicted RBP	3.97	□□□□□ -1.77
RPO31	YOR116C	RIM20	Q12033	661 aa		3.97	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms