RNA–Protein interactions for RNA: YLR106C

MDN1, Transcript of Huge dynein-related AAA-type ATPase (midasin), yeast

Gene MDN1, Length 14,733 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MDN1	YLR106C	ESC8	Q08119	714 aa		3.6	□□□□□ -1.83
MDN1	YLR106C	AAD4	Q07747	329 aa		3.6	□□□□□ -1.83
MDN1	YLR106C	BRR1	Q99177	341 aa	Predicted RBP	3.6	□□□□□ -1.83
MDN1	YLR106C	TIF35	Q04067	274 aa	Known RBP	3.6	□□□□□ -1.83
MDN1	YLR106C	APL4	Q12028	832 aa		3.6	□□□□□ -1.83
MDN1	YLR106C	RTP1	Q12751	981 aa		3.6	□□□□□ -1.83
MDN1	YLR106C	RPS3	P05750	240 aa	Known RBP	3.6	□□□□□ -1.83
MDN1	YLR106C	YMR085W	P0CF18	432 aa		3.6	□□□□□ -1.83
MDN1	YLR106C	NBP1	P52919	319 aa	Predicted RBP	3.6	□□□□□ -1.83
MDN1	YLR106C	YGL140C	P53120	1219 aa		3.6	□□□□□ -1.83
MDN1	YLR106C	SUP45	P12385	437 aa	Known RBP	3.6	□□□□□ -1.83
MDN1	YLR106C	VPS1	P21576	704 aa	Known RBP	3.6	□□□□□ -1.83
MDN1	YLR106C	CCT2	P39076	527 aa	Known RBP	3.6	□□□□□ -1.83
MDN1	YLR106C	RRP36	Q12481	300 aa	Predicted RBP	3.6	□□□□□ -1.83
MDN1	YLR106C	MUD2	P36084	527 aa	Known RBP	3.59	□□□□□ -1.83
MDN1	YLR106C	PMC1	P38929	1173 aa	Predicted RBP	3.59	□□□□□ -1.83
MDN1	YLR106C	WHI2	P12611	486 aa		3.59	□□□□□ -1.83
MDN1	YLR106C	THI20	Q08224	551 aa		3.59	□□□□□ -1.83
MDN1	YLR106C	RRT2	P38332	387 aa		3.59	□□□□□ -1.83
MDN1	YLR106C	ISM1	P48526	1002 aa		3.59	□□□□□ -1.83
MDN1	YLR106C	CSE1	P33307	960 aa		3.59	□□□□□ -1.83
MDN1	YLR106C	ESF2	P53743	316 aa	Known RBP	3.59	□□□□□ -1.83
MDN1	YLR106C	CWC2	Q12046	339 aa	Predicted RBP	3.59	□□□□□ -1.83
MDN1	YLR106C	RSR1	P13856	272 aa		3.59	□□□□□ -1.83
MDN1	YLR106C	VHC1	P38329	1120 aa		3.59	□□□□□ -1.83
MDN1	YLR106C	SSL2	Q00578	843 aa		3.59	□□□□□ -1.83
MDN1	YLR106C	VTC3	Q02725	835 aa		3.59	□□□□□ -1.83
MDN1	YLR106C	PUS1	Q12211	544 aa	Known RBP	3.59	□□□□□ -1.83
MDN1	YLR106C	FRT2	P39734	528 aa		3.59	□□□□□ -1.83
MDN1	YLR106C	AIP1	P46680	615 aa	Known RBP	3.59	□□□□□ -1.83
MDN1	YLR106C	NOP6	Q07623	225 aa	Known RBP	3.59	□□□□□ -1.83
MDN1	YLR106C	GPA2	P10823	449 aa		3.59	□□□□□ -1.84
MDN1	YLR106C	RRN3	P36070	627 aa		3.59	□□□□□ -1.84
MDN1	YLR106C	PCA1	P38360	1216 aa		3.59	□□□□□ -1.84
MDN1	YLR106C	LAM5	P43560	674 aa		3.59	□□□□□ -1.84
MDN1	YLR106C	PCD1	Q12524	340 aa		3.59	□□□□□ -1.84
MDN1	YLR106C	TUB2	P02557	457 aa	Known RBP	3.59	□□□□□ -1.84
MDN1	YLR106C	SLY1	P22213	666 aa		3.59	□□□□□ -1.84
MDN1	YLR106C	BIM1	P40013	344 aa		3.59	□□□□□ -1.84
MDN1	YLR106C	MMF1	P40185	145 aa	Known RBP	3.59	□□□□□ -1.84
MDN1	YLR106C	DAL7	P21826	554 aa		3.59	□□□□□ -1.84
MDN1	YLR106C	PHO88	P38264	188 aa	Predicted RBP	3.59	□□□□□ -1.84
MDN1	YLR106C	CBR1	P38626	284 aa	Known RBP	3.59	□□□□□ -1.84
MDN1	YLR106C	SMF1	P38925	575 aa		3.59	□□□□□ -1.84
MDN1	YLR106C	PTK2	P47116	818 aa	Known RBP	3.59	□□□□□ -1.84
MDN1	YLR106C	UTR4	P32626	227 aa		3.59	□□□□□ -1.84
MDN1	YLR106C	YJR039W	P47107	1121 aa		3.59	□□□□□ -1.84
MDN1	YLR106C	ARH1	P48360	493 aa		3.59	□□□□□ -1.84
MDN1	YLR106C	TRM11	Q12463	433 aa		3.59	□□□□□ -1.84
MDN1	YLR106C	EXO5	P38289	585 aa		3.58	□□□□□ -1.84
MDN1	YLR106C	LIN1	P38852	340 aa	Predicted RBP	3.58	□□□□□ -1.84
MDN1	YLR106C	VPS5	Q92331	675 aa		3.58	□□□□□ -1.84
MDN1	YLR106C	YPK1	P12688	680 aa	Known RBP	3.58	□□□□□ -1.84
MDN1	YLR106C	FRA1	Q07825	749 aa		3.58	□□□□□ -1.84
MDN1	YLR106C	CSR2	Q12734	1121 aa		3.58	□□□□□ -1.84
MDN1	YLR106C	LAS1	P36146	502 aa	Predicted RBP	3.58	□□□□□ -1.84
MDN1	YLR106C	PCH2	P38126	564 aa		3.58	□□□□□ -1.84
MDN1	YLR106C	ALG11	P53954	548 aa	Known RBP	3.58	□□□□□ -1.84
MDN1	YLR106C	ECM23	Q02710	187 aa		3.58	□□□□□ -1.84
MDN1	YLR106C	TPO1	Q07824	586 aa		3.58	□□□□□ -1.84
MDN1	YLR106C	THI21	Q08975	551 aa		3.58	□□□□□ -1.84
MDN1	YLR106C	RPB4	P20433	221 aa	Predicted RBP	3.58	□□□□□ -1.84
MDN1	YLR106C	TKL1	P23254	680 aa	Known RBP	3.58	□□□□□ -1.84
MDN1	YLR106C	POB3	Q04636	552 aa	Known RBP	3.58	□□□□□ -1.84
MDN1	YLR106C	TUB3	P09734	445 aa	Known RBP	3.58	□□□□□ -1.84
MDN1	YLR106C	SMI1	P32566	505 aa		3.58	□□□□□ -1.84
MDN1	YLR106C	SND1	Q04007	877 aa		3.58	□□□□□ -1.84
MDN1	YLR106C	URH1	Q04179	340 aa		3.58	□□□□□ -1.84
MDN1	YLR106C	SPO20	Q04359	397 aa		3.58	□□□□□ -1.84
MDN1	YLR106C	ABP140	Q08641	628 aa	Known RBP	3.58	□□□□□ -1.84
MDN1	YLR106C	ABD1	P32783	436 aa	Predicted RBP	3.58	□□□□□ -1.84
MDN1	YLR106C	PRT1	P06103	763 aa	Known RBP	3.58	□□□□□ -1.84
MDN1	YLR106C	PPR1	P07272	904 aa	Predicted RBP	3.58	□□□□□ -1.84
MDN1	YLR106C	SAM1	P10659	382 aa	Known RBP	3.58	□□□□□ -1.84
MDN1	YLR106C	SEC1	P30619	724 aa	Known RBP	3.58	□□□□□ -1.84
MDN1	YLR106C	YBL055C	P34220	418 aa	Predicted RBP	3.58	□□□□□ -1.84
MDN1	YLR106C	CRP1	P38845	465 aa	Known RBP	3.58	□□□□□ -1.84
MDN1	YLR106C	AEP2	P22136	580 aa		3.58	□□□□□ -1.84
MDN1	YLR106C	LGE1	Q02796	332 aa	Known RBP	3.58	□□□□□ -1.84
MDN1	YLR106C	RLI1	Q03195	608 aa	Known RBP	3.58	□□□□□ -1.84
MDN1	YLR106C	MCD1	Q12158	566 aa		3.58	□□□□□ -1.84
MDN1	YLR106C	CNN1	P43618	361 aa		3.58	□□□□□ -1.84
MDN1	YLR106C	NNF1	P47149	201 aa		3.58	□□□□□ -1.84
MDN1	YLR106C	ORC4	P54791	529 aa		3.58	□□□□□ -1.84
MDN1	YLR106C	GPD1	Q00055	391 aa	Known RBP	3.58	□□□□□ -1.84
MDN1	YLR106C	PRM6	Q04705	352 aa		3.58	□□□□□ -1.84
MDN1	YLR106C	DNL4	Q08387	944 aa	Predicted RBP	3.58	□□□□□ -1.84
MDN1	YLR106C	EFG1	Q3E705	233 aa	Known RBP	3.58	□□□□□ -1.84
MDN1	YLR106C	CMD1	P06787	147 aa	Known RBP	3.58	□□□□□ -1.84
MDN1	YLR106C	YKL100C	P34248	587 aa		3.58	□□□□□ -1.84
MDN1	YLR106C	ERG7	P38604	731 aa		3.58	□□□□□ -1.84
MDN1	YLR106C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	3.58	□□□□□ -1.84	not detected
MDN1	YLR106C	TIF6	Q12522	245 aa	Known RBP	3.58	□□□□□ -1.84
MDN1	YLR106C	TIF1	P10081	395 aa	Known RBP	3.58	□□□□□ -1.84
MDN1	YLR106C	IRE1	P32361	1115 aa		3.58	□□□□□ -1.84
MDN1	YLR106C	YMR134W	P40207	237 aa		3.58	□□□□□ -1.84
MDN1	YLR106C	FIG4	P42837	879 aa		3.58	□□□□□ -1.84
MDN1	YLR106C	RSC4	Q02206	625 aa		3.58	□□□□□ -1.84
MDN1	YLR106C	GAS5	Q08193	484 aa		3.58	□□□□□ -1.84
MDN1	YLR106C	RCK2	P38623	610 aa		3.58	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 18.5 ms