RNA–Protein interactions for RNA: YLR006C

SSK1, Transcript of Cytoplasmic phosphorelay intermediate osmosensor and regulator, yeastyeast

Gene SSK1, Length 2,139 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSK1YLR006C RGD1P38339 666 aa6.15□□□□□ -1.42
SSK1YLR006C EFM2P38347 419 aa6.15□□□□□ -1.42
SSK1YLR006C STN1P38960 494 aa6.15□□□□□ -1.42
SSK1YLR006C TPA1P40032 644 aaKnown RBP6.15□□□□□ -1.42
SSK1YLR006C ALG2P43636 503 aa6.15□□□□□ -1.42
SSK1YLR006C HST2P53686 357 aa6.15□□□□□ -1.42
SSK1YLR006C NIS1P53939 407 aa6.15□□□□□ -1.42
SSK1YLR006C BOP3P53958 396 aa6.15□□□□□ -1.42
SSK1YLR006C CWC21Q03375 135 aaKnown RBP6.15□□□□□ -1.42
SSK1YLR006C MSH6Q03834 1242 aa6.15□□□□□ -1.42
SSK1YLR006C RGA2Q06407 1009 aa6.15□□□□□ -1.42
SSK1YLR006C YLR001CQ07895 862 aa6.15□□□□□ -1.42
SSK1YLR006C YOL036WQ08206 761 aa6.15□□□□□ -1.42
SSK1YLR006C YOL075CQ08234 1294 aa6.15□□□□□ -1.42
SSK1YLR006C TIP41Q12199 356 aa6.15□□□□□ -1.42
SSK1YLR006C ALG1P16661 449 aa6.14□□□□□ -1.43
SSK1YLR006C PRO3P32263 286 aaKnown RBP6.14□□□□□ -1.43
SSK1YLR006C RPC82P32349 654 aa6.14□□□□□ -1.43
SSK1YLR006C CNS1P33313 385 aa6.14□□□□□ -1.43
SSK1YLR006C RSC30P38781 883 aa6.14□□□□□ -1.43
SSK1YLR006C LAM1P38851 1228 aa6.14□□□□□ -1.43
SSK1YLR006C RTS1P38903 757 aa6.14□□□□□ -1.43
SSK1YLR006C SMF1P38925 575 aa6.14□□□□□ -1.43
SSK1YLR006C ICP55P40051 511 aa6.14□□□□□ -1.43
SSK1YLR006C PCL7P40186 285 aa6.14□□□□□ -1.43
SSK1YLR006C DSN1P40568 576 aa6.14□□□□□ -1.43
SSK1YLR006C AIP1P46680 615 aaKnown RBP6.14□□□□□ -1.43
SSK1YLR006C PRY3P47033 881 aa6.14□□□□□ -1.43
SSK1YLR006C RTC4P53850 401 aa6.14□□□□□ -1.43
SSK1YLR006C NAN1Q02931 896 aaKnown RBP6.14□□□□□ -1.43
SSK1YLR006C TFB2Q02939 513 aa6.14□□□□□ -1.43
SSK1YLR006C IRC4Q03036 179 aa6.14□□□□□ -1.43
SSK1YLR006C THI73Q07904 523 aa6.14□□□□□ -1.43
SSK1YLR006C SPO11P23179 398 aa6.14□□□□□ -1.43
SSK1YLR006C SPT5P27692 1063 aaKnown RBP6.14□□□□□ -1.43
SSK1YLR006C PTP2P29461 750 aa6.14□□□□□ -1.43
SSK1YLR006C TEF4P36008 412 aaKnown RBP6.14□□□□□ -1.43
SSK1YLR006C MED8P38304 223 aa6.14□□□□□ -1.43
SSK1YLR006C CCC2P38995 1004 aa6.14□□□□□ -1.43
SSK1YLR006C SKP2P42843 763 aa6.14□□□□□ -1.43
SSK1YLR006C RPN11P43588 306 aaKnown RBP6.14□□□□□ -1.43
SSK1YLR006C YGR053CP53234 283 aa6.14□□□□□ -1.43
SSK1YLR006C PRP42Q03776 544 aaKnown RBP6.14□□□□□ -1.43
SSK1YLR006C TRS120Q04183 1289 aa6.14□□□□□ -1.43
SSK1YLR006C ARA2Q04212 335 aa6.14□□□□□ -1.43
SSK1YLR006C YKU80Q04437 629 aa6.14□□□□□ -1.43
SSK1YLR006C ARR2Q06597 130 aa6.14□□□□□ -1.43
SSK1YLR006C YAP7Q08182 245 aa6.14□□□□□ -1.43
SSK1YLR006C CWC2Q12046 339 aaPredicted RBP6.14□□□□□ -1.43
SSK1YLR006C GLE1Q12315 538 aa6.14□□□□□ -1.43
SSK1YLR006C HKR1P41809 1802 aa6.14□□□□□ -1.43
SSK1YLR006C RAD1P06777 1100 aa6.13□□□□□ -1.43
SSK1YLR006C RAD57P25301 460 aa6.13□□□□□ -1.43
SSK1YLR006C DUT1P33317 147 aa6.13□□□□□ -1.43
SSK1YLR006C PTH2P34222 208 aa6.13□□□□□ -1.43
SSK1YLR006C ERG7P38604 731 aa6.13□□□□□ -1.43
SSK1YLR006C SPL2P38839 148 aa6.13□□□□□ -1.43
SSK1YLR006C YCK3P39962 524 aa6.13□□□□□ -1.43
SSK1YLR006C MIC19P43594 170 aa6.13□□□□□ -1.43
SSK1YLR006C ISM1P48526 1002 aa6.13□□□□□ -1.43
SSK1YLR006C ROM1P53046 1155 aa6.13□□□□□ -1.43
SSK1YLR006C TRS130Q03660 1102 aa6.13□□□□□ -1.43
SSK1YLR006C OPI10Q08202 246 aa6.13□□□□□ -1.43
SSK1YLR006C SMF3Q12078 473 aaPredicted RBP6.13□□□□□ -1.43
SSK1YLR006C YBL111CQ3E7Y5 667 aa6.13□□□□□ -1.43
SSK1YLR006C HOP09932 586 aa6.13□□□□□ -1.43
SSK1YLR006C HSF1P10961 833 aa6.13□□□□□ -1.43
SSK1YLR006C CAF20P12962 161 aaKnown RBP6.13□□□□□ -1.43
SSK1YLR006C PMS1P14242 873 aa6.13□□□□□ -1.43
SSK1YLR006C PAP1P29468 568 aaKnown RBP6.13□□□□□ -1.43
SSK1YLR006C SRB4P32569 687 aa6.13□□□□□ -1.43
SSK1YLR006C PEP7P32609 515 aa6.13□□□□□ -1.43
SSK1YLR006C BYE1P36106 594 aa6.13□□□□□ -1.43
SSK1YLR006C YHR131CP38835 850 aa6.13□□□□□ -1.43
SSK1YLR006C BUD16P39988 312 aa6.13□□□□□ -1.43
SSK1YLR006C VFA1P40080 203 aa6.13□□□□□ -1.43
SSK1YLR006C JEM1P40358 645 aa6.13□□□□□ -1.43
SSK1YLR006C EFM4P40516 257 aa6.13□□□□□ -1.43
SSK1YLR006C CTK3P46963 296 aaPredicted RBP6.13□□□□□ -1.43
SSK1YLR006C HFM1P51979 1187 aa6.13□□□□□ -1.43
SSK1YLR006C SDA1P53313 767 aaKnown RBP6.13□□□□□ -1.43
SSK1YLR006C CWC24P53769 259 aa6.13□□□□□ -1.43
SSK1YLR006C PTA1Q01329 785 aaPredicted RBP6.13□□□□□ -1.43
SSK1YLR006C CIA1Q05583 330 aa6.13□□□□□ -1.43
SSK1YLR006C TDA5Q06417 326 aaKnown RBP6.13□□□□□ -1.43
SSK1YLR006C GIC2Q06648 383 aa6.13□□□□□ -1.43
SSK1YLR006C ADY3Q07732 790 aa6.13□□□□□ -1.43
SSK1YLR006C SPO75Q07798 868 aa6.13□□□□□ -1.43
SSK1YLR006C BUG1Q12191 341 aa6.13□□□□□ -1.43
SSK1YLR006C FLO1P32768 1537 aa6.13□□□□□ -1.43
SSK1YLR006C RPB2P08518 1224 aaKnown RBP6.12□□□□□ -1.43
SSK1YLR006C VMA2P16140 517 aaKnown RBP6.12□□□□□ -1.43
SSK1YLR006C OM45P16547 393 aa6.12□□□□□ -1.43
SSK1YLR006C RAD53P22216 821 aa6.12□□□□□ -1.43
SSK1YLR006C NPP1P25353 742 aa6.12□□□□□ -1.43
SSK1YLR006C RPC53P25441 422 aa6.12□□□□□ -1.43
SSK1YLR006C PDC6P26263 563 aaKnown RBP6.12□□□□□ -1.43
SSK1YLR006C FRD1P32614 470 aaKnown RBP6.12□□□□□ -1.43
SSK1YLR006C CBF5P33322 483 aaKnown RBP RIP-Chip data6.12□□□□□ -1.43not detected
SSK1YLR006C YMR124WP39523 943 aaKnown RBP6.12□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 68.4 ms