RNA–Protein interactions for RNA: YER168C

CCA1, Transcript of ATP (CTP):tRNA-specific tRNA nucleotidyltransferase, yeast

Gene CCA1, Length 1,641 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CCA1	YER168C	DAS1	P47005	663 aa		11.22	□□□□□ -0.61
CCA1	YER168C	COQ9	Q05779	260 aa		11.22	□□□□□ -0.61
CCA1	YER168C	TAF10	Q12030	206 aa		11.22	□□□□□ -0.61
CCA1	YER168C	SRV2	P17555	526 aa	Known RBP	11.21	□□□□□ -0.61
CCA1	YER168C	SFL1	P20134	766 aa		11.21	□□□□□ -0.61
CCA1	YER168C	RTG2	P32608	588 aa	Known RBP	11.21	□□□□□ -0.61
CCA1	YER168C	YKR018C	P36114	725 aa		11.21	□□□□□ -0.61
CCA1	YER168C	RPC37	P36121	282 aa		11.21	□□□□□ -0.61
CCA1	YER168C	TVP38	P36164	337 aa		11.21	□□□□□ -0.61
CCA1	YER168C	REG2	P38232	338 aa		11.21	□□□□□ -0.61
CCA1	YER168C	YBR062C	P38239	180 aa		11.21	□□□□□ -0.61
CCA1	YER168C	DYS1	P38791	387 aa		11.21	□□□□□ -0.61
CCA1	YER168C	ORC5	P50874	479 aa		11.21	□□□□□ -0.61
CCA1	YER168C	SHR3	Q02774	210 aa		11.21	□□□□□ -0.61
CCA1	YER168C	FAR8	Q05040	523 aa		11.21	□□□□□ -0.61
CCA1	YER168C	ERP3	Q12403	225 aa		11.21	□□□□□ -0.61
CCA1	YER168C	THS1	P04801	734 aa	Known RBP	11.2	□□□□□ -0.62
CCA1	YER168C	CBF1	P17106	351 aa		11.2	□□□□□ -0.62
CCA1	YER168C	ARG1	P22768	420 aa		11.2	□□□□□ -0.62
CCA1	YER168C	TKL1	P23254	680 aa	Known RBP	11.2	□□□□□ -0.62
CCA1	YER168C	PTC3	P34221	468 aa	Known RBP	11.2	□□□□□ -0.62
CCA1	YER168C	SSP1	P38871	571 aa		11.2	□□□□□ -0.62
CCA1	YER168C	HMF1	P40037	129 aa	Known RBP	11.2	□□□□□ -0.62
CCA1	YER168C	YMR134W	P40207	237 aa		11.2	□□□□□ -0.62
CCA1	YER168C	ASN1	P49089	572 aa	Known RBP	11.2	□□□□□ -0.62
CCA1	YER168C	AI5_BETA	Q9ZZX0	354 aa		11.2	□□□□□ -0.62
CCA1	YER168C	GCR1	P07261	785 aa		11.2	□□□□□ -0.62
CCA1	YER168C	YML002W	P0CF17	737 aa		11.2	□□□□□ -0.62
CCA1	YER168C	PDB1	P32473	366 aa	Known RBP	11.2	□□□□□ -0.62
CCA1	YER168C	YNL146W	P53906	100 aa		11.2	□□□□□ -0.62
CCA1	YER168C	ADE3	P07245	946 aa	Known RBP	11.19	□□□□□ -0.62
CCA1	YER168C	PMC1	P38929	1173 aa	Predicted RBP	11.19	□□□□□ -0.62
CCA1	YER168C	VAB2	P40003	282 aa		11.19	□□□□□ -0.62
CCA1	YER168C	TDA10	P42938	290 aa		11.19	□□□□□ -0.62
CCA1	YER168C	DRN1	P53255	507 aa	Known RBP	11.19	□□□□□ -0.62
CCA1	YER168C	NOG2	P53742	486 aa	Known RBP	11.19	□□□□□ -0.62
CCA1	YER168C	YML119W	Q03208	357 aa		11.19	□□□□□ -0.62
CCA1	YER168C	ERV41	Q04651	352 aa		11.19	□□□□□ -0.62
CCA1	YER168C	BI2	P03873	423 aa		11.18	□□□□□ -0.62
CCA1	YER168C	BI4	P03879	638 aa		11.18	□□□□□ -0.62
CCA1	YER168C	RAD10	P06838	210 aa		11.18	□□□□□ -0.62
CCA1	YER168C	PMS1	P14242	873 aa		11.18	□□□□□ -0.62
CCA1	YER168C	VMA2	P16140	517 aa	Known RBP	11.18	□□□□□ -0.62
CCA1	YER168C	HEM15	P16622	393 aa		11.18	□□□□□ -0.62
CCA1	YER168C	SCJ1	P25303	377 aa		11.18	□□□□□ -0.62
CCA1	YER168C	FTR1	P40088	404 aa		11.18	□□□□□ -0.62
CCA1	YER168C	ZIP2	P53061	704 aa		11.18	□□□□□ -0.62
CCA1	YER168C	NOB1	Q08444	459 aa	Known RBP	11.18	□□□□□ -0.62
CCA1	YER168C	GIS3	Q12418	502 aa		11.18	□□□□□ -0.62
CCA1	YER168C	BI3	Q9ZZW7	517 aa		11.18	□□□□□ -0.62
CCA1	YER168C	ILV2	P07342	687 aa	Known RBP	11.17	□□□□□ -0.62
CCA1	YER168C	CCL1	P37366	393 aa		11.17	□□□□□ -0.62
CCA1	YER168C	YEL025C	P39991	1188 aa		11.17	□□□□□ -0.62
CCA1	YER168C	EAF5	P39995	279 aa		11.17	□□□□□ -0.62
CCA1	YER168C	YGR125W	P53273	1036 aa		11.17	□□□□□ -0.62
CCA1	YER168C	YDR090C	Q03193	310 aa		11.17	□□□□□ -0.62
CCA1	YER168C	STE20	Q03497	939 aa	Known RBP	11.17	□□□□□ -0.62
CCA1	YER168C	OSW2	Q12202	724 aa		11.17	□□□□□ -0.62
CCA1	YER168C	ECM3	Q99252	613 aa		11.17	□□□□□ -0.62
CCA1	YER168C	PSE1	P32337	1089 aa	Known RBP	11.17	□□□□□ -0.62
CCA1	YER168C	GYP6	P32806	458 aa		11.17	□□□□□ -0.62
CCA1	YER168C	VPS29	P38759	282 aa		11.17	□□□□□ -0.62
CCA1	YER168C	YCK3	P39962	524 aa		11.17	□□□□□ -0.62
CCA1	YER168C	SBE2	P42223	864 aa	Known RBP	11.17	□□□□□ -0.62
CCA1	YER168C	PUS2	P53167	370 aa		11.17	□□□□□ -0.62
CCA1	YER168C	CUL3	P53202	744 aa		11.17	□□□□□ -0.62
CCA1	YER168C	CMS1	Q07897	291 aa	Known RBP	11.17	□□□□□ -0.62
CCA1	YER168C	AEP2	P22136	580 aa		11.16	□□□□□ -0.62
CCA1	YER168C	VMA4	P22203	233 aa	Known RBP	11.16	□□□□□ -0.62
CCA1	YER168C	NIP1	P32497	812 aa	Known RBP	11.16	□□□□□ -0.62
CCA1	YER168C	ABD1	P32783	436 aa	Predicted RBP	11.16	□□□□□ -0.62
CCA1	YER168C	PEX2	P32800	271 aa		11.16	□□□□□ -0.62
CCA1	YER168C	SEG2	P34250	1132 aa		11.16	□□□□□ -0.62
CCA1	YER168C	HEK2	P38199	381 aa	Known RBP RIP-Chip data	11.16	□□□□□ -0.62	not detected
CCA1	YER168C	POP4	P38336	279 aa		11.16	□□□□□ -0.62
CCA1	YER168C	GPB2	P39717	880 aa		11.16	□□□□□ -0.62
CCA1	YER168C	SHE10	P53075	577 aa		11.16	□□□□□ -0.62
CCA1	YER168C	SUB1	P54000	292 aa	Known RBP	11.16	□□□□□ -0.62
CCA1	YER168C	SLD5	Q03406	294 aa		11.16	□□□□□ -0.62
CCA1	YER168C	GPI13	Q07830	1017 aa		11.16	□□□□□ -0.62
CCA1	YER168C	NAT1	P12945	854 aa	Known RBP	11.15	□□□□□ -0.62
CCA1	YER168C	EST1	P17214	699 aa	Predicted RBP	11.15	□□□□□ -0.62
CCA1	YER168C	COX11	P19516	300 aa	Known RBP	11.15	□□□□□ -0.62
CCA1	YER168C	KIN82	P25341	720 aa		11.15	□□□□□ -0.62
CCA1	YER168C	RRT12	P25381	491 aa		11.15	□□□□□ -0.62
CCA1	YER168C	TPS2	P31688	896 aa	Known RBP	11.15	□□□□□ -0.62
CCA1	YER168C	TMT1	P32643	299 aa		11.15	□□□□□ -0.62
CCA1	YER168C	DBP7	P36120	742 aa	Known RBP	11.15	□□□□□ -0.62
CCA1	YER168C	PNT1	P38969	423 aa		11.15	□□□□□ -0.62
CCA1	YER168C	TMN3	P40071	706 aa		11.15	□□□□□ -0.62
CCA1	YER168C	YML6	P51998	286 aa		11.15	□□□□□ -0.62
CCA1	YER168C	VPS16	Q03308	798 aa		11.15	□□□□□ -0.62
CCA1	YER168C	IVY1	Q04934	453 aa		11.15	□□□□□ -0.62
CCA1	YER168C	ABP140	Q08641	628 aa	Known RBP	11.15	□□□□□ -0.62
CCA1	YER168C	RIB2	Q12362	591 aa	Known RBP	11.15	□□□□□ -0.62
CCA1	YER168C	CDC19	P00549	500 aa	Known RBP	11.14	□□□□□ -0.63
CCA1	YER168C	TUB3	P09734	445 aa	Known RBP	11.14	□□□□□ -0.63
CCA1	YER168C	GAL11	P19659	1081 aa		11.14	□□□□□ -0.63
CCA1	YER168C	HEL1	P36113	551 aa		11.14	□□□□□ -0.63
CCA1	YER168C	PCA1	P38360	1216 aa		11.14	□□□□□ -0.63

Retrieved 100 of 5,963 RNA–protein pairs in 53.7 ms