RNA–Protein interactions for RNA: YER151C

UBP3, Transcript of Ubiquitin-specific protease involved in transport and osmotic response, yeastyeast

Gene UBP3, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP3YER151C GUD1Q07729 489 aa1.37□□□□□ -2.19
UBP3YER151C XYL2Q07993 356 aa1.37□□□□□ -2.19
UBP3YER151C YOL073CQ08232 322 aa1.37□□□□□ -2.19
UBP3YER151C SSP2Q08646 371 aa1.37□□□□□ -2.19
UBP3YER151C GUP2Q08929 609 aa1.37□□□□□ -2.19
UBP3YER151C NDJ1Q12366 352 aa1.37□□□□□ -2.19
UBP3YER151C CAR2P07991 424 aaKnown RBP1.36□□□□□ -2.19
UBP3YER151C RPL11AP0C0W9 174 aaKnown RBP1.36□□□□□ -2.19
UBP3YER151C DBP5P20449 482 aaKnown RBP1.36□□□□□ -2.19
UBP3YER151C BAS1P22035 811 aa1.36□□□□□ -2.19
UBP3YER151C SYP1P25623 870 aaKnown RBP1.36□□□□□ -2.19
UBP3YER151C SWC3P31376 625 aa1.36□□□□□ -2.19
UBP3YER151C SEC21P32074 935 aaKnown RBP1.36□□□□□ -2.19
UBP3YER151C PEX2P32800 271 aa1.36□□□□□ -2.19
UBP3YER151C STE5P32917 917 aa1.36□□□□□ -2.19
UBP3YER151C PAM1P37304 830 aaKnown RBP1.36□□□□□ -2.19
UBP3YER151C YAP1801P38856 637 aa1.36□□□□□ -2.19
UBP3YER151C PNT1P38969 423 aa1.36□□□□□ -2.19
UBP3YER151C GEM1P39722 662 aa1.36□□□□□ -2.19
UBP3YER151C TIM44Q01852 431 aa1.36□□□□□ -2.19
UBP3YER151C CLP1Q08685 445 aaPredicted RBP1.36□□□□□ -2.19
UBP3YER151C RPL11BQ3E757 174 aaPredicted RBP1.36□□□□□ -2.19
UBP3YER151C TY1B-AO13527 1196 aaKnown RBP1.36□□□□□ -2.19
UBP3YER151C EFT1P32324 842 aaKnown RBP1.36□□□□□ -2.19
UBP3YER151C ABD1P32783 436 aaPredicted RBP1.36□□□□□ -2.19
UBP3YER151C SLD2P34252 453 aa1.36□□□□□ -2.19
UBP3YER151C MGE1P38523 228 aa1.36□□□□□ -2.19
UBP3YER151C IML2P47031 731 aa1.36□□□□□ -2.19
UBP3YER151C VPS16Q03308 798 aa1.36□□□□□ -2.19
UBP3YER151C SYF1Q04048 859 aaPredicted RBP1.36□□□□□ -2.19
UBP3YER151C IRC10Q08118 586 aa1.36□□□□□ -2.19
UBP3YER151C APC5Q08683 685 aa1.36□□□□□ -2.19
UBP3YER151C FLC1Q08967 793 aa1.36□□□□□ -2.19
UBP3YER151C ACM1Q08981 209 aa1.36□□□□□ -2.19
UBP3YER151C MRPL7P36519 292 aa1.35□□□□□ -2.19
UBP3YER151C KTR4P38131 464 aa1.35□□□□□ -2.19
UBP3YER151C UBS1P38290 277 aa1.35□□□□□ -2.19
UBP3YER151C DOT5P40553 215 aa1.35□□□□□ -2.19
UBP3YER151C STB4P50104 949 aa1.35□□□□□ -2.19
UBP3YER151C SNU71P53207 620 aaKnown RBP1.35□□□□□ -2.19
UBP3YER151C ERG5P54781 538 aa1.35□□□□□ -2.19
UBP3YER151C CDA1Q06702 301 aa1.35□□□□□ -2.19
UBP3YER151C CIR2Q08822 631 aa1.35□□□□□ -2.19
UBP3YER151C MSL5Q12186 476 aaKnown RBP RIP-Chip data1.35□□□□□ -2.19not detected
UBP3YER151C MDM20Q12387 796 aaKnown RBP1.35□□□□□ -2.19
UBP3YER151C TRP4P07285 380 aaPredicted RBP1.35□□□□□ -2.19
UBP3YER151C KRS1P15180 591 aaKnown RBP1.35□□□□□ -2.19
UBP3YER151C KAR4P25583 335 aa1.35□□□□□ -2.19
UBP3YER151C PPH3P32345 308 aa1.35□□□□□ -2.19
UBP3YER151C AFR1P33304 620 aa1.35□□□□□ -2.19
UBP3YER151C MBP1P39678 833 aa1.35□□□□□ -2.19
UBP3YER151C TYW3P53177 273 aa1.35□□□□□ -2.19
UBP3YER151C HEF3P53978 1044 aaKnown RBP1.35□□□□□ -2.19
UBP3YER151C ESF1Q06344 628 aaKnown RBP1.35□□□□□ -2.19
UBP3YER151C OMS1Q06668 471 aa1.35□□□□□ -2.19
UBP3YER151C RTT10Q08924 1013 aa1.35□□□□□ -2.19
UBP3YER151C RPP2AP05319 106 aaKnown RBP1.34□□□□□ -2.19
UBP3YER151C PET112P33893 541 aa1.34□□□□□ -2.19
UBP3YER151C MRPL40P36534 297 aa1.34□□□□□ -2.19
UBP3YER151C VAB2P40003 282 aa1.34□□□□□ -2.19
UBP3YER151C ZRG8P40021 1076 aa1.34□□□□□ -2.19
UBP3YER151C GLO1P50107 326 aa1.34□□□□□ -2.19
UBP3YER151C YVH1Q02256 364 aaKnown RBP1.34□□□□□ -2.19
UBP3YER151C SLU7Q02775 382 aaKnown RBP1.34□□□□□ -2.19
UBP3YER151C GDE1Q02979 1223 aa1.34□□□□□ -2.19
UBP3YER151C HRQ1Q05549 1077 aa1.34□□□□□ -2.19
UBP3YER151C MCH5Q08777 521 aa1.34□□□□□ -2.19
UBP3YER151C GNT1Q12096 491 aa1.34□□□□□ -2.19
UBP3YER151C INO1P11986 533 aa1.34□□□□□ -2.2
UBP3YER151C MSM1P22438 575 aa1.34□□□□□ -2.2
UBP3YER151C TYE7P33122 291 aaPredicted RBP1.34□□□□□ -2.2
UBP3YER151C MTH1P35198 433 aa1.34□□□□□ -2.2
UBP3YER151C BUD16P39988 312 aa1.34□□□□□ -2.2
UBP3YER151C YGL176CP46945 554 aa1.34□□□□□ -2.2
UBP3YER151C MPP10P47083 593 aaKnown RBP1.34□□□□□ -2.2
UBP3YER151C ALD6P54115 500 aaKnown RBP1.34□□□□□ -2.2
UBP3YER151C HOF1Q05080 669 aa1.34□□□□□ -2.2
UBP3YER151C TLG2Q08144 397 aa1.34□□□□□ -2.2
UBP3YER151C PIN2Q12057 282 aa1.34□□□□□ -2.2
UBP3YER151C YLL058WQ12198 575 aa1.34□□□□□ -2.2
UBP3YER151C NPC2Q12408 173 aa1.34□□□□□ -2.2
UBP3YER151C MOT1P32333 1867 aa1.34□□□□□ -2.2
UBP3YER151C RPS8AP0CX39 200 aaKnown RBP1.33□□□□□ -2.2
UBP3YER151C RPS8BP0CX40 200 aaKnown RBP1.33□□□□□ -2.2
UBP3YER151C KAR1P11927 433 aa1.33□□□□□ -2.2
UBP3YER151C ERG4P25340 473 aa1.33□□□□□ -2.2
UBP3YER151C STE14P32584 239 aa1.33□□□□□ -2.2
UBP3YER151C MNR2P35724 969 aa1.33□□□□□ -2.2
UBP3YER151C FMO1P38866 432 aa1.33□□□□□ -2.2
UBP3YER151C HUL4P40985 892 aa1.33□□□□□ -2.2
UBP3YER151C RPS0BP46654 252 aaKnown RBP1.33□□□□□ -2.2
UBP3YER151C JIP5Q06214 492 aaPredicted RBP1.33□□□□□ -2.2
UBP3YER151C ACF2Q12168 779 aa1.33□□□□□ -2.2
UBP3YER151C SUT2Q12286 268 aa1.33□□□□□ -2.2
UBP3YER151C ECM29P38737 1868 aa1.33□□□□□ -2.2
UBP3YER151C TEF1P02994 458 aaKnown RBP1.33□□□□□ -2.2
UBP3YER151C THS1P04801 734 aaKnown RBP1.33□□□□□ -2.2
UBP3YER151C SPE1P08432 466 aa1.33□□□□□ -2.2
UBP3YER151C NPP1P25353 742 aa1.33□□□□□ -2.2
UBP3YER151C LYP1P32487 611 aa1.33□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 20.5 ms