RNA–Protein interactions for RNA: YDR213W

UPC2, Transcript of Sterol regulatory element binding protein, yeastyeast

Gene UPC2, Length 2,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UPC2YDR213W YKR005CQ02203 525 aa4.53□□□□□ -1.68
UPC2YDR213W EAR1Q03212 550 aa4.53□□□□□ -1.68
UPC2YDR213W YDR344CQ05510 147 aa4.53□□□□□ -1.68
UPC2YDR213W DAS2Q12084 232 aa4.53□□□□□ -1.68
UPC2YDR213W SLM3Q12093 417 aa4.53□□□□□ -1.68
UPC2YDR213W TAH18Q12181 623 aa4.53□□□□□ -1.68
UPC2YDR213W RAD61Q99359 647 aa4.53□□□□□ -1.68
UPC2YDR213W UTP10P42945 1769 aaKnown RBP4.53□□□□□ -1.68
UPC2YDR213W SCP160P06105 1222 aaKnown RBP RIP-Chip data4.52□□□□□ -1.69not detected
UPC2YDR213W HSF1P10961 833 aa4.52□□□□□ -1.69
UPC2YDR213W YAK1P14680 807 aa4.52□□□□□ -1.69
UPC2YDR213W RPL5P26321 297 aaKnown RBP4.52□□□□□ -1.69
UPC2YDR213W NIP1P32497 812 aaKnown RBP4.52□□□□□ -1.69
UPC2YDR213W YBL055CP34220 418 aaPredicted RBP4.52□□□□□ -1.69
UPC2YDR213W RRN3P36070 627 aa4.52□□□□□ -1.69
UPC2YDR213W YKR078WP36158 585 aaKnown RBP4.52□□□□□ -1.69
UPC2YDR213W GRS1P38088 690 aaKnown RBP4.52□□□□□ -1.69
UPC2YDR213W SPL2P38839 148 aa4.52□□□□□ -1.69
UPC2YDR213W HAL5P38970 855 aaKnown RBP4.52□□□□□ -1.69
UPC2YDR213W YJL107CP42947 387 aa4.52□□□□□ -1.69
UPC2YDR213W YJR008WP47085 338 aa4.52□□□□□ -1.69
UPC2YDR213W YJR107WP47145 328 aa4.52□□□□□ -1.69
UPC2YDR213W DSL1P53847 754 aa4.52□□□□□ -1.69
UPC2YDR213W UBP2Q01476 1272 aa4.52□□□□□ -1.69
UPC2YDR213W RPM2Q02773 1202 aa4.52□□□□□ -1.69
UPC2YDR213W KAR5Q04746 504 aa4.52□□□□□ -1.69
UPC2YDR213W ARP9Q05123 467 aa4.52□□□□□ -1.69
UPC2YDR213W ADY4Q05955 493 aa4.52□□□□□ -1.69
UPC2YDR213W NUT2Q06213 157 aa4.52□□□□□ -1.69
UPC2YDR213W MLH2Q07980 695 aa4.52□□□□□ -1.69
UPC2YDR213W MET6P05694 767 aaKnown RBP4.52□□□□□ -1.69
UPC2YDR213W MPH2P0CD99 609 aa4.52□□□□□ -1.69
UPC2YDR213W TEC1P18412 486 aa4.52□□□□□ -1.69
UPC2YDR213W PRP5P21372 849 aaPredicted RBP4.52□□□□□ -1.69
UPC2YDR213W OSM1P21375 501 aaKnown RBP4.52□□□□□ -1.69
UPC2YDR213W RPC53P25441 422 aa4.52□□□□□ -1.69
UPC2YDR213W SLA2P33338 968 aa4.52□□□□□ -1.69
UPC2YDR213W AST1P35183 429 aa4.52□□□□□ -1.69
UPC2YDR213W SLM4P38247 162 aa4.52□□□□□ -1.69
UPC2YDR213W PPX1P38698 397 aa4.52□□□□□ -1.69
UPC2YDR213W VMA22P38784 181 aa4.52□□□□□ -1.69
UPC2YDR213W TOS3P43637 560 aa4.52□□□□□ -1.69
UPC2YDR213W IRC8P47046 822 aa4.52□□□□□ -1.69
UPC2YDR213W UBA2P52488 636 aa4.52□□□□□ -1.69
UPC2YDR213W MMT1Q03218 510 aa4.52□□□□□ -1.69
UPC2YDR213W SMD2Q06217 110 aaKnown RBP4.52□□□□□ -1.69
UPC2YDR213W MEU1Q07938 337 aaKnown RBP RIP-Chip data4.52□□□□□ -1.69not detected
UPC2YDR213W GPN2Q08726 347 aaPredicted RBP4.52□□□□□ -1.69
UPC2YDR213W IES3Q12345 250 aa4.52□□□□□ -1.69
UPC2YDR213W ADR1P07248 1323 aa4.52□□□□□ -1.69
UPC2YDR213W SNA3P14359 133 aa4.52□□□□□ -1.69
UPC2YDR213W VPS34P22543 875 aa4.52□□□□□ -1.69
UPC2YDR213W KIP1P28742 1111 aa4.52□□□□□ -1.69
UPC2YDR213W YEL1P34225 687 aa4.52□□□□□ -1.69
UPC2YDR213W YKL023WP36103 277 aaKnown RBP4.52□□□□□ -1.69
UPC2YDR213W HSM3P38348 480 aa4.52□□□□□ -1.69
UPC2YDR213W TRM5P38793 499 aa4.52□□□□□ -1.69
UPC2YDR213W APE4P38821 490 aa4.52□□□□□ -1.69
UPC2YDR213W LCP5P40079 357 aaPredicted RBP4.52□□□□□ -1.69
UPC2YDR213W SET2P46995 733 aaKnown RBP4.52□□□□□ -1.69
UPC2YDR213W USE1P53146 245 aa4.52□□□□□ -1.69
UPC2YDR213W YBP2P53169 641 aa4.52□□□□□ -1.69
UPC2YDR213W TOF1P53840 1238 aa4.52□□□□□ -1.69
UPC2YDR213W OYE2Q03558 400 aaKnown RBP4.52□□□□□ -1.69
UPC2YDR213W RSM24Q03976 319 aa4.52□□□□□ -1.69
UPC2YDR213W COA4Q05809 96 aa4.52□□□□□ -1.69
UPC2YDR213W SPO21Q12411 609 aa4.52□□□□□ -1.69
UPC2YDR213W DPB2P24482 689 aaPredicted RBP4.51□□□□□ -1.69
UPC2YDR213W EFT1P32324 842 aaKnown RBP4.51□□□□□ -1.69
UPC2YDR213W RME1P32338 300 aaKnown RBP4.51□□□□□ -1.69
UPC2YDR213W PRP40P33203 583 aaKnown RBP4.51□□□□□ -1.69
UPC2YDR213W HES1P35843 434 aa4.51□□□□□ -1.69
UPC2YDR213W SRL3P36167 246 aa4.51□□□□□ -1.69
UPC2YDR213W ETP1P38748 585 aaKnown RBP4.51□□□□□ -1.69
UPC2YDR213W NPT1P39683 429 aaKnown RBP4.51□□□□□ -1.69
UPC2YDR213W SHE4P51534 789 aa4.51□□□□□ -1.69
UPC2YDR213W MDM1Q01846 1127 aa4.51□□□□□ -1.69
UPC2YDR213W OSH6Q02201 448 aa4.51□□□□□ -1.69
UPC2YDR213W UTP6Q02354 440 aaKnown RBP4.51□□□□□ -1.69
UPC2YDR213W SLU7Q02775 382 aaKnown RBP4.51□□□□□ -1.69
UPC2YDR213W GTB1Q04924 702 aa4.51□□□□□ -1.69
UPC2YDR213W TOS4Q06266 489 aa4.51□□□□□ -1.69
UPC2YDR213W FKS3Q04952 1785 aa4.51□□□□□ -1.69
UPC2YDR213W ADE3P07245 946 aaKnown RBP4.51□□□□□ -1.69
UPC2YDR213W CBF1P17106 351 aa4.51□□□□□ -1.69
UPC2YDR213W SNT1P25357 1226 aa4.51□□□□□ -1.69
UPC2YDR213W MUM2P38236 366 aa4.51□□□□□ -1.69
UPC2YDR213W RFC3P38629 340 aa4.51□□□□□ -1.69
UPC2YDR213W IRR1P40541 1150 aa4.51□□□□□ -1.69
UPC2YDR213W FIG4P42837 879 aa4.51□□□□□ -1.69
UPC2YDR213W SQS1P53866 767 aaKnown RBP4.51□□□□□ -1.69
UPC2YDR213W FRK1Q03002 865 aaPredicted RBP4.51□□□□□ -1.69
UPC2YDR213W SGT2Q12118 346 aaKnown RBP4.51□□□□□ -1.69
UPC2YDR213W MSH5Q12175 901 aa4.51□□□□□ -1.69
UPC2YDR213W MNL2Q12205 849 aa4.51□□□□□ -1.69
UPC2YDR213W ENT1Q12518 454 aa4.51□□□□□ -1.69
UPC2YDR213W FAS2P19097 1887 aaKnown RBP4.5□□□□□ -1.69
UPC2YDR213W SSB1P11484 613 aaKnown RBP4.5□□□□□ -1.69
UPC2YDR213W THR1P17423 357 aaKnown RBP4.5□□□□□ -1.69
UPC2YDR213W VMA4P22203 233 aaKnown RBP4.5□□□□□ -1.69
Retrieved 100 of 5,963 RNA–protein pairs in 9.5 ms