RNA–Protein interactions for RNA: snR62

snR62, Transcript of C/D box small nucleolar RNA (snoRNA), yeast

Gene snR62, Length 100 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR62	snR62	SIR3	P06701	978 aa		0.9	□□□□□ -2.27
snR62	snR62	MET4	P32389	672 aa		0.9	□□□□□ -2.27
snR62	snR62	UGP1	P32861	499 aa	Known RBP	0.9	□□□□□ -2.27
snR62	snR62	MOT2	P34909	587 aa	Known RBP	0.9	□□□□□ -2.27
snR62	snR62	TSL1	P38427	1098 aa	Known RBP	0.9	□□□□□ -2.27
snR62	snR62	PCI8	P40512	444 aa		0.9	□□□□□ -2.27
snR62	snR62	ATG4	P53867	494 aa		0.9	□□□□□ -2.27
snR62	snR62	YKL033W-A	Q86ZR7	236 aa		0.9	□□□□□ -2.27
snR62	snR62	RAD27	P26793	382 aa		0.89	□□□□□ -2.27
snR62	snR62	PAN2	P53010	1115 aa	Predicted RBP	0.89	□□□□□ -2.27
snR62	snR62	AAT1	Q01802	451 aa		0.89	□□□□□ -2.27
snR62	snR62	ORM2	Q06144	216 aa		0.89	□□□□□ -2.27
snR62	snR62	TGL5	Q12043	749 aa		0.89	□□□□□ -2.27
snR62	snR62	CDC12	P32468	407 aa	Known RBP	0.88	□□□□□ -2.27
snR62	snR62	NGG1	P32494	702 aa		0.88	□□□□□ -2.27
snR62	snR62	RPT1	P33299	467 aa	Known RBP	0.88	□□□□□ -2.27
snR62	snR62	SFB3	P38810	929 aa		0.88	□□□□□ -2.27
snR62	snR62	FAA2	P39518	744 aa		0.88	□□□□□ -2.27
snR62	snR62	MNT3	P40549	630 aa		0.88	□□□□□ -2.27
snR62	snR62	SRP1	Q02821	542 aa	Known RBP	0.88	□□□□□ -2.27
snR62	snR62	FRE7	Q12333	620 aa		0.88	□□□□□ -2.27
snR62	snR62	INO1	P11986	533 aa		0.87	□□□□□ -2.27
snR62	snR62	FUB1	P25659	250 aa		0.87	□□□□□ -2.27
snR62	snR62	CDC48	P25694	835 aa	Known RBP	0.87	□□□□□ -2.27
snR62	snR62	BEM3	P32873	1128 aa		0.87	□□□□□ -2.27
snR62	snR62	SAP190	P36123	1033 aa		0.87	□□□□□ -2.27
snR62	snR62	GMH1	P36125	273 aa		0.87	□□□□□ -2.27
snR62	snR62	ARC40	P38328	384 aa	Known RBP	0.87	□□□□□ -2.27
snR62	snR62	PMC1	P38929	1173 aa	Predicted RBP	0.87	□□□□□ -2.27
snR62	snR62	CEP3	P40969	608 aa		0.87	□□□□□ -2.27
snR62	snR62	MUS81	Q04149	632 aa	Predicted RBP	0.87	□□□□□ -2.27
snR62	snR62	SMA2	Q04658	369 aa		0.87	□□□□□ -2.27
snR62	snR62	ULA1	Q12059	462 aa		0.87	□□□□□ -2.27
snR62	snR62	RKM4	Q12504	494 aa		0.87	□□□□□ -2.27
snR62	snR62	YLR415C	O13578	112 aa		0.86	□□□□□ -2.27
snR62	snR62	RAD2	P07276	1031 aa		0.86	□□□□□ -2.27
snR62	snR62	KCC4	P25389	1037 aa		0.86	□□□□□ -2.27
snR62	snR62	TYE7	P33122	291 aa	Predicted RBP	0.86	□□□□□ -2.27
snR62	snR62	YKL107W	P34251	309 aa		0.86	□□□□□ -2.27
snR62	snR62	YKR078W	P36158	585 aa	Known RBP	0.86	□□□□□ -2.27
snR62	snR62	JHD1	P40034	492 aa		0.86	□□□□□ -2.27
snR62	snR62	BAP3	P41815	604 aa		0.86	□□□□□ -2.27
snR62	snR62	YKE2	P52553	114 aa		0.86	□□□□□ -2.27
snR62	snR62	YGL260W	P53056	76 aa		0.86	□□□□□ -2.27
snR62	snR62	YGR122W	P53272	402 aa		0.86	□□□□□ -2.27
snR62	snR62	APJ1	P53940	528 aa		0.86	□□□□□ -2.27
snR62	snR62	SUB2	Q07478	446 aa	Known RBP	0.86	□□□□□ -2.27
snR62	snR62	BUD7	Q08754	746 aa		0.86	□□□□□ -2.27
snR62	snR62	ATG11	Q12527	1178 aa		0.86	□□□□□ -2.27
snR62	snR62	LYP1	P32487	611 aa		0.85	□□□□□ -2.27
snR62	snR62	PIN4	P34217	668 aa	Known RBP RIP-Chip data	0.85	□□□□□ -2.27	not detected
snR62	snR62	PHO11	P35842	467 aa		0.85	□□□□□ -2.27
snR62	snR62	YMC2	P38087	329 aa		0.85	□□□□□ -2.27
snR62	snR62	EXO84	P38261	753 aa		0.85	□□□□□ -2.27
snR62	snR62	PHO12	P38693	467 aa		0.85	□□□□□ -2.27
snR62	snR62	YHL050C	P38721	697 aa		0.85	□□□□□ -2.27
snR62	snR62	YHR219W	P38900	624 aa		0.85	□□□□□ -2.27
snR62	snR62	PZF1	P39933	429 aa		0.85	□□□□□ -2.27
snR62	snR62	YIL169C	P40442	995 aa		0.85	□□□□□ -2.27
snR62	snR62	HXT16	P47185	567 aa		0.85	□□□□□ -2.27
snR62	snR62	FHN1	P53279	174 aa		0.85	□□□□□ -2.27
snR62	snR62	YKR011C	Q02209	353 aa		0.85	□□□□□ -2.27
snR62	snR62	PRS5	Q12265	496 aa	Known RBP	0.85	□□□□□ -2.27
snR62	snR62	AI5_ALPHA	Q9ZZX1	630 aa		0.85	□□□□□ -2.27
snR62	snR62	TRP2	P00899	507 aa	Known RBP	0.84	□□□□□ -2.27
snR62	snR62	YBR238C	P38330	731 aa	Known RBP	0.84	□□□□□ -2.27
snR62	snR62	CCT3	P39077	534 aa	Known RBP	0.84	□□□□□ -2.27
snR62	snR62	ASN1	P49089	572 aa	Known RBP	0.84	□□□□□ -2.27
snR62	snR62	SPC98	P53540	846 aa		0.84	□□□□□ -2.27
snR62	snR62	HDA1	P53973	706 aa		0.84	□□□□□ -2.27
snR62	snR62	ERG13	P54839	491 aa	Known RBP	0.84	□□□□□ -2.27
snR62	snR62	IRC3	Q06683	689 aa		0.84	□□□□□ -2.27
snR62	snR62	PHO5	P00635	467 aa		0.83	□□□□□ -2.28
snR62	snR62	RFA1	P22336	621 aa	Known RBP	0.83	□□□□□ -2.28
snR62	snR62	MVD1	P32377	396 aa	Known RBP	0.83	□□□□□ -2.28
snR62	snR62	SAK1	P38990	1142 aa		0.83	□□□□□ -2.28
snR62	snR62	PIP2	P52960	996 aa		0.83	□□□□□ -2.28
snR62	snR62	ATP23	P53722	227 aa		0.83	□□□□□ -2.28
snR62	snR62	RTT10	Q08924	1013 aa		0.83	□□□□□ -2.28
snR62	snR62	USV1	Q12132	391 aa		0.83	□□□□□ -2.28
snR62	snR62	CYC8	P14922	966 aa		0.82	□□□□□ -2.28
snR62	snR62	FLO5	P38894	1075 aa		0.82	□□□□□ -2.28
snR62	snR62	MIT1	P40002	666 aa		0.82	□□□□□ -2.28
snR62	snR62	PFA3	P42836	336 aa		0.82	□□□□□ -2.28
snR62	snR62	NMD5	P46970	1048 aa		0.82	□□□□□ -2.28
snR62	snR62	TEX1	P53851	422 aa	Known RBP	0.82	□□□□□ -2.28
snR62	snR62	DUS3	Q06053	668 aa	Known RBP	0.82	□□□□□ -2.28
snR62	snR62	SRL1	Q08673	210 aa		0.82	□□□□□ -2.28
snR62	snR62	NPP1	P25353	742 aa		0.81	□□□□□ -2.28
snR62	snR62	SET3	P36124	751 aa		0.81	□□□□□ -2.28
snR62	snR62	RPS26A	P39938	119 aa	Known RBP	0.81	□□□□□ -2.28
snR62	snR62	RPS26B	P39939	119 aa	Known RBP	0.81	□□□□□ -2.28
snR62	snR62	TYW3	P53177	273 aa		0.81	□□□□□ -2.28
snR62	snR62	YLR225C	Q05948	407 aa	Known RBP	0.81	□□□□□ -2.28
snR62	snR62	TMA46	Q12000	345 aa	Known RBP	0.81	□□□□□ -2.28
snR62	snR62	HER1	Q12276	1246 aa		0.81	□□□□□ -2.28
snR62	snR62	YPR089W	O13585	888 aa		0.8	□□□□□ -2.28
snR62	snR62	TUP1	P16649	713 aa		0.8	□□□□□ -2.28
snR62	snR62	THR1	P17423	357 aa	Known RBP	0.8	□□□□□ -2.28
snR62	snR62	TSR4	P25040	408 aa		0.8	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 67.6 ms