RNA–Protein interactions for RNA: snR43

snR43, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR43, Length 209 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR43snR43 ERS1P17261 260 aa2.98□□□□□ -1.93
snR43snR43 MBR1P23493 339 aa2.98□□□□□ -1.93
snR43snR43 HEM3P28789 327 aa2.98□□□□□ -1.93
snR43snR43 RPL8BP29453 256 aaKnown RBP2.98□□□□□ -1.93
snR43snR43 SMY2P32909 740 aaKnown RBP2.98□□□□□ -1.93
snR43snR43 AMN1P38285 549 aaPredicted RBP2.98□□□□□ -1.93
snR43snR43 NDT80P38830 627 aa2.98□□□□□ -1.93
snR43snR43 SKN7P38889 622 aa2.98□□□□□ -1.93
snR43snR43 RRP8P38961 392 aaKnown RBP2.98□□□□□ -1.93
snR43snR43 RPS26AP39938 119 aaKnown RBP2.98□□□□□ -1.93
snR43snR43 RPS26BP39939 119 aaKnown RBP2.98□□□□□ -1.93
snR43snR43 FYV10P40492 516 aa2.98□□□□□ -1.93
snR43snR43 YJL045WP47052 634 aa2.98□□□□□ -1.93
snR43snR43 NUT1P53114 1132 aa2.98□□□□□ -1.93
snR43snR43 HAS1Q03532 505 aaKnown RBP2.98□□□□□ -1.93
snR43snR43 OYE2Q03558 400 aaKnown RBP2.98□□□□□ -1.93
snR43snR43 SPO71Q03868 1245 aa2.98□□□□□ -1.93
snR43snR43 BRE1Q07457 700 aaKnown RBP2.98□□□□□ -1.93
snR43snR43 MCA1Q08601 432 aa2.98□□□□□ -1.93
snR43snR43 YLL058WQ12198 575 aa2.98□□□□□ -1.93
snR43snR43 CMR1Q12510 522 aaKnown RBP2.98□□□□□ -1.93
snR43snR43 UBR2Q07963 1872 aa2.98□□□□□ -1.93
snR43snR43 NPR1P22211 790 aa2.97□□□□□ -1.93
snR43snR43 MAK31P23059 88 aa2.97□□□□□ -1.93
snR43snR43 YCK2P23292 546 aaKnown RBP2.97□□□□□ -1.93
snR43snR43 PPZ1P26570 692 aa2.97□□□□□ -1.93
snR43snR43 SKI2P35207 1287 aaKnown RBP RIP-Chip data2.97□□□□□ -1.93not detected
snR43snR43 TVP38P36164 337 aa2.97□□□□□ -1.93
snR43snR43 SAF1P38352 637 aa2.97□□□□□ -1.93
snR43snR43 CIC1P38779 376 aaKnown RBP2.97□□□□□ -1.93
snR43snR43 NMD2P38798 1089 aaKnown RBP2.97□□□□□ -1.93
snR43snR43 BUD16P39988 312 aa2.97□□□□□ -1.93
snR43snR43 HMF1P40037 129 aaKnown RBP2.97□□□□□ -1.93
snR43snR43 PEX13P80667 386 aa2.97□□□□□ -1.93
snR43snR43 MDM1Q01846 1127 aa2.97□□□□□ -1.93
snR43snR43 PNG1Q02890 363 aa2.97□□□□□ -1.93
snR43snR43 LCD1Q04377 747 aa2.97□□□□□ -1.93
snR43snR43 YLR455WQ06188 304 aa2.97□□□□□ -1.93
snR43snR43 MAG2Q06436 670 aaKnown RBP2.97□□□□□ -1.93
snR43snR43 RRP15Q06511 250 aaPredicted RBP2.97□□□□□ -1.93
snR43snR43 VIP1Q06685 1146 aaKnown RBP2.97□□□□□ -1.93
snR43snR43 SOG2Q08817 791 aa2.97□□□□□ -1.93
snR43snR43 SSF2Q12153 453 aaPredicted RBP2.97□□□□□ -1.93
snR43snR43 RKM4Q12504 494 aa2.97□□□□□ -1.93
snR43snR43 IRA2P19158 3079 aa2.97□□□□□ -1.93
snR43snR43 TY4B-PA0A0B7P3V8 1104 aa2.96□□□□□ -1.94
snR43snR43 UBC1P21734 215 aaKnown RBP2.96□□□□□ -1.94
snR43snR43 MSS51P32335 436 aa2.96□□□□□ -1.94
snR43snR43 PEP7P32609 515 aa2.96□□□□□ -1.94
snR43snR43 BUD2P33314 1104 aa2.96□□□□□ -1.94
snR43snR43 APN2P38207 520 aa2.96□□□□□ -1.94
snR43snR43 MGE1P38523 228 aa2.96□□□□□ -1.94
snR43snR43 RIM11P38615 370 aa2.96□□□□□ -1.94
snR43snR43 CRG1P38892 291 aaRIP-Chip data2.96□□□□□ -1.94not detected
snR43snR43 YFL052WP43551 465 aa2.96□□□□□ -1.94
snR43snR43 MDR1P53258 950 aa2.96□□□□□ -1.94
snR43snR43 HDA1P53973 706 aa2.96□□□□□ -1.94
snR43snR43 YMR187CQ03236 431 aa2.96□□□□□ -1.94
snR43snR43 YCS4Q06156 1176 aa2.96□□□□□ -1.94
snR43snR43 PIG1Q06216 648 aa2.96□□□□□ -1.94
snR43snR43 SPN1Q06505 410 aaPredicted RBP2.96□□□□□ -1.94
snR43snR43 WHI4Q07655 649 aaKnown RBP2.96□□□□□ -1.94
snR43snR43 IRC10Q08118 586 aa2.96□□□□□ -1.94
snR43snR43 DSE3Q08729 430 aa2.96□□□□□ -1.94
snR43snR43 OXR1Q08952 273 aa2.96□□□□□ -1.94
snR43snR43 ALG6Q12001 544 aaKnown RBP2.96□□□□□ -1.94
snR43snR43 YDR215CQ12240 137 aa2.96□□□□□ -1.94
snR43snR43 TY4A-HQ6Q5P6 413 aa2.96□□□□□ -1.94
snR43snR43 GLT1Q12680 2145 aaKnown RBP2.95□□□□□ -1.94
snR43snR43 PRC1P00729 532 aa2.95□□□□□ -1.94
snR43snR43 RPL8AP17076 256 aaKnown RBP2.95□□□□□ -1.94
snR43snR43 IMG2P25642 146 aaPredicted RBP2.95□□□□□ -1.94
snR43snR43 GCD6P32501 712 aaKnown RBP2.95□□□□□ -1.94
snR43snR43 VPS35P34110 944 aa2.95□□□□□ -1.94
snR43snR43 RER2P35196 286 aa2.95□□□□□ -1.94
snR43snR43 MRPL7P36519 292 aa2.95□□□□□ -1.94
snR43snR43 RFS1P38234 210 aaKnown RBP2.95□□□□□ -1.94
snR43snR43 MCX1P38323 520 aaPredicted RBP2.95□□□□□ -1.94
snR43snR43 YAP1801P38856 637 aa2.95□□□□□ -1.94
snR43snR43 YEL025CP39991 1188 aa2.95□□□□□ -1.94
snR43snR43 MMF1P40185 145 aaKnown RBP2.95□□□□□ -1.94
snR43snR43 YTA12P40341 825 aa2.95□□□□□ -1.94
snR43snR43 TPM2P40414 161 aa2.95□□□□□ -1.94
snR43snR43 CSM2P40465 213 aa2.95□□□□□ -1.94
snR43snR43 FAF1P40546 346 aaPredicted RBP2.95□□□□□ -1.94
snR43snR43 RSM26P47141 266 aa2.95□□□□□ -1.94
snR43snR43 PSP2P50109 593 aaKnown RBP2.95□□□□□ -1.94
snR43snR43 BUD9P53226 547 aa2.95□□□□□ -1.94
snR43snR43 NRD1P53617 575 aaKnown RBP RIP-Chip data2.95□□□□□ -1.94not detected
snR43snR43 MUK1Q02866 612 aa2.95□□□□□ -1.94
snR43snR43 GDE1Q02979 1223 aa2.95□□□□□ -1.94
snR43snR43 CAN1P04817 590 aa2.94□□□□□ -1.94
snR43snR43 HTS1P07263 546 aaKnown RBP2.94□□□□□ -1.94
snR43snR43 TY1A-LR4P0C2I8 440 aaKnown RBP2.94□□□□□ -1.94
snR43snR43 RPL40AP0CH08 128 aaKnown RBP2.94□□□□□ -1.94
snR43snR43 RPL40BP0CH09 128 aaKnown RBP2.94□□□□□ -1.94
snR43snR43 TY1A-DR6P0CX70 440 aa2.94□□□□□ -1.94
snR43snR43 TY1A-ER1P0CX71 440 aa2.94□□□□□ -1.94
snR43snR43 TY1A-LR2P0CX72 440 aa2.94□□□□□ -1.94
snR43snR43 TY1A-PLP0CX73 440 aa2.94□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 78.1 ms