RNA–Protein interactions for RNA: YOR290C

SNF2, Transcript of Catalytic subunit of the SWI/SNF chromatin remodeling complex, yeast

Gene SNF2, Length 5,112 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNF2	YOR290C	SGO1	Q08490	590 aa		4.27	□□□□□ -1.73
SNF2	YOR290C	CHS5	Q12114	671 aa	Known RBP	4.27	□□□□□ -1.73
SNF2	YOR290C	EMP46	Q12396	444 aa		4.27	□□□□□ -1.73
SNF2	YOR290C	IRA2	P19158	3079 aa		4.27	□□□□□ -1.73
SNF2	YOR290C	HXK1	P04806	485 aa	Known RBP	4.26	□□□□□ -1.73
SNF2	YOR290C	GPA1	P08539	472 aa		4.26	□□□□□ -1.73
SNF2	YOR290C	RNR2	P09938	399 aa	Known RBP	4.26	□□□□□ -1.73
SNF2	YOR290C	PMR1	P13586	950 aa		4.26	□□□□□ -1.73
SNF2	YOR290C	SCL1	P21243	252 aa	Known RBP	4.26	□□□□□ -1.73
SNF2	YOR290C	MRPS28	P21771	286 aa		4.26	□□□□□ -1.73
SNF2	YOR290C	RPL8B	P29453	256 aa	Known RBP	4.26	□□□□□ -1.73
SNF2	YOR290C	TRZ1	P36159	838 aa	Predicted RBP	4.26	□□□□□ -1.73
SNF2	YOR290C	YHI9	P38765	294 aa		4.26	□□□□□ -1.73
SNF2	YOR290C	SLM1	P40485	686 aa		4.26	□□□□□ -1.73
SNF2	YOR290C	SGN1	P40561	250 aa	Known RBP RIP-Chip data	4.26	□□□□□ -1.73	not detected
SNF2	YOR290C	YGR237C	P50089	785 aa		4.26	□□□□□ -1.73
SNF2	YOR290C	ZDS2	P54786	942 aa		4.26	□□□□□ -1.73
SNF2	YOR290C	AAD16	Q02895	342 aa		4.26	□□□□□ -1.73
SNF2	YOR290C	TRS130	Q03660	1102 aa		4.26	□□□□□ -1.73
SNF2	YOR290C	YOR352W	Q08816	343 aa		4.26	□□□□□ -1.73
SNF2	YOR290C	RDR1	Q08904	546 aa		4.26	□□□□□ -1.73
SNF2	YOR290C	CDC8	P00572	216 aa		4.26	□□□□□ -1.73
SNF2	YOR290C	KEX2	P13134	814 aa		4.26	□□□□□ -1.73
SNF2	YOR290C	CRM1	P30822	1084 aa	Known RBP	4.26	□□□□□ -1.73
SNF2	YOR290C	RNP1	P32385	249 aa		4.26	□□□□□ -1.73
SNF2	YOR290C	YBL010C	P32788	280 aa		4.26	□□□□□ -1.73
SNF2	YOR290C	ELM1	P32801	640 aa		4.26	□□□□□ -1.73
SNF2	YOR290C	TEF4	P36008	412 aa	Known RBP	4.26	□□□□□ -1.73
SNF2	YOR290C	YHB1	P39676	399 aa	Known RBP	4.26	□□□□□ -1.73
SNF2	YOR290C	DOT5	P40553	215 aa		4.26	□□□□□ -1.73
SNF2	YOR290C	IME4	P41833	600 aa		4.26	□□□□□ -1.73
SNF2	YOR290C	YNL035C	P53962	389 aa	Known RBP	4.26	□□□□□ -1.73
SNF2	YOR290C	SLU7	Q02775	382 aa	Known RBP	4.26	□□□□□ -1.73
SNF2	YOR290C	GIP3	Q03016	1276 aa		4.26	□□□□□ -1.73
SNF2	YOR290C	RQC1	Q05468	723 aa	Known RBP	4.26	□□□□□ -1.73
SNF2	YOR290C	RPC53	P25441	422 aa		4.26	□□□□□ -1.73
SNF2	YOR290C	YHL050C	P38721	697 aa		4.26	□□□□□ -1.73
SNF2	YOR290C	PDS1	P40316	373 aa	Predicted RBP	4.26	□□□□□ -1.73
SNF2	YOR290C	SEC28	P40509	296 aa	Known RBP	4.26	□□□□□ -1.73
SNF2	YOR290C	RLP7	P40693	322 aa	Known RBP	4.26	□□□□□ -1.73
SNF2	YOR290C	YGR122W	P53272	402 aa		4.26	□□□□□ -1.73
SNF2	YOR290C	FAR11	P53917	953 aa		4.26	□□□□□ -1.73
SNF2	YOR290C	CUS1	Q02554	436 aa	Predicted RBP	4.26	□□□□□ -1.73
SNF2	YOR290C	ULP1	Q02724	621 aa		4.26	□□□□□ -1.73
SNF2	YOR290C	BCP1	Q06338	283 aa		4.26	□□□□□ -1.73
SNF2	YOR290C	YOL087C	Q99247	1116 aa		4.26	□□□□□ -1.73
SNF2	YOR290C	SPS4	P09937	338 aa		4.26	□□□□□ -1.73
SNF2	YOR290C	MAK11	P20484	414 aa	Known RBP	4.26	□□□□□ -1.73
SNF2	YOR290C	SPS22	P25380	463 aa		4.26	□□□□□ -1.73
SNF2	YOR290C	PEP3	P27801	918 aa		4.26	□□□□□ -1.73
SNF2	YOR290C	SPF1	P39986	1215 aa	Known RBP	4.26	□□□□□ -1.73
SNF2	YOR290C	APS3	P47064	194 aa		4.26	□□□□□ -1.73
SNF2	YOR290C	APT1	P49435	187 aa	Known RBP	4.26	□□□□□ -1.73
SNF2	YOR290C	FMS1	P50264	508 aa		4.26	□□□□□ -1.73
SNF2	YOR290C	CWC24	P53769	259 aa		4.26	□□□□□ -1.73
SNF2	YOR290C	EFM6	P53970	246 aa		4.26	□□□□□ -1.73
SNF2	YOR290C	UBX5	Q06682	500 aa		4.26	□□□□□ -1.73
SNF2	YOR290C	PPM2	Q08282	695 aa		4.26	□□□□□ -1.73
SNF2	YOR290C	RIM20	Q12033	661 aa		4.26	□□□□□ -1.73
SNF2	YOR290C	SSA3	P09435	649 aa	Known RBP	4.25	□□□□□ -1.73
SNF2	YOR290C	KAP122	P32767	1081 aa		4.25	□□□□□ -1.73
SNF2	YOR290C	MCR1	P36060	302 aa	Known RBP	4.25	□□□□□ -1.73
SNF2	YOR290C	UGA2	P38067	497 aa		4.25	□□□□□ -1.73
SNF2	YOR290C	SLZ1	P40167	298 aa		4.25	□□□□□ -1.73
SNF2	YOR290C	YFR018C	P43599	363 aa		4.25	□□□□□ -1.73
SNF2	YOR290C	DAD3	P69850	94 aa		4.25	□□□□□ -1.73
SNF2	YOR290C	BUD22	Q04347	519 aa	Known RBP	4.25	□□□□□ -1.73
SNF2	YOR290C	VPS5	Q92331	675 aa		4.25	□□□□□ -1.73
SNF2	YOR290C	MAG1	P22134	296 aa	Known RBP	4.25	□□□□□ -1.73
SNF2	YOR290C	VMA6	P32366	345 aa	Known RBP	4.25	□□□□□ -1.73
SNF2	YOR290C	RPT5	P33297	434 aa	Known RBP	4.25	□□□□□ -1.73
SNF2	YOR290C	LRG1	P35688	1017 aa		4.25	□□□□□ -1.73
SNF2	YOR290C	KES1	P35844	434 aa	Known RBP	4.25	□□□□□ -1.73
SNF2	YOR290C	SPC97	P38863	823 aa		4.25	□□□□□ -1.73
SNF2	YOR290C	PFS1	P38872	237 aa		4.25	□□□□□ -1.73
SNF2	YOR290C	VPS45	P38932	577 aa		4.25	□□□□□ -1.73
SNF2	YOR290C	SPC105	P53148	917 aa		4.25	□□□□□ -1.73
SNF2	YOR290C	IRC23	Q08416	157 aa		4.25	□□□□□ -1.73
SNF2	YOR290C	VIK1	Q12045	647 aa		4.25	□□□□□ -1.73
SNF2	YOR290C	MCM16	Q12262	181 aa		4.25	□□□□□ -1.73
SNF2	YOR290C	EFG1	Q3E705	233 aa	Known RBP	4.25	□□□□□ -1.73
SNF2	YOR290C	SWI1	P09547	1314 aa		4.25	□□□□□ -1.73
SNF2	YOR290C	TUF1	P02992	437 aa	Known RBP	4.25	□□□□□ -1.73
SNF2	YOR290C	HTA1	P04911	132 aa	Known RBP	4.25	□□□□□ -1.73
SNF2	YOR290C	HTA2	P04912	132 aa		4.25	□□□□□ -1.73
SNF2	YOR290C	MET2	P08465	486 aa		4.25	□□□□□ -1.73
SNF2	YOR290C	KAR1	P11927	433 aa		4.25	□□□□□ -1.73
SNF2	YOR290C	DAP2	P18962	818 aa		4.25	□□□□□ -1.73
SNF2	YOR290C	MDJ1	P35191	511 aa		4.25	□□□□□ -1.73
SNF2	YOR290C	RIC1	P40395	1056 aa		4.25	□□□□□ -1.73
SNF2	YOR290C	KTR5	P53966	522 aa	Predicted RBP	4.25	□□□□□ -1.73
SNF2	YOR290C	ORC4	P54791	529 aa		4.25	□□□□□ -1.73
SNF2	YOR290C	ACS1	Q01574	713 aa		4.25	□□□□□ -1.73
SNF2	YOR290C	NKP2	Q06162	153 aa		4.25	□□□□□ -1.73
SNF2	YOR290C	FEX2	Q08991	375 aa		4.25	□□□□□ -1.73
SNF2	YOR290C	TFB5	Q3E7C1	72 aa	Predicted RBP	4.25	□□□□□ -1.73
SNF2	YOR290C	TOM20	P35180	183 aa		4.25	□□□□□ -1.73
SNF2	YOR290C	YHR020W	P38708	688 aa	Known RBP	4.25	□□□□□ -1.73
SNF2	YOR290C	NPR3	P38742	1146 aa		4.25	□□□□□ -1.73
SNF2	YOR290C	NPR2	P39923	615 aa		4.25	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 50.4 ms