RNA–Protein interactions for RNA: YOR239W

ABP140, Transcript of AdoMet-dependent tRNA methyltransferase and actin binding protein, yeastyeast

Gene ABP140, Length 1,887 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABP140YOR239W YJR054WP47114 497 aa3.99□□□□□ -1.77
ABP140YOR239W BRO1P48582 844 aa3.99□□□□□ -1.77
ABP140YOR239W GCV2P49095 1034 aa3.99□□□□□ -1.77
ABP140YOR239W UBA2P52488 636 aa3.99□□□□□ -1.77
ABP140YOR239W MON1P53129 644 aa3.99□□□□□ -1.77
ABP140YOR239W MPS2P53159 387 aa3.99□□□□□ -1.77
ABP140YOR239W VPS16Q03308 798 aa3.99□□□□□ -1.77
ABP140YOR239W GIR2Q03768 265 aaPredicted RBP3.99□□□□□ -1.77
ABP140YOR239W HFD1Q04458 532 aa3.99□□□□□ -1.77
ABP140YOR239W YML082WQ04533 649 aaKnown RBP3.99□□□□□ -1.77
ABP140YOR239W ATG13Q06628 738 aa3.99□□□□□ -1.77
ABP140YOR239W CSR1Q06705 408 aaKnown RBP3.99□□□□□ -1.77
ABP140YOR239W TAF10Q12030 206 aa3.99□□□□□ -1.77
ABP140YOR239W NUP192P47054 1683 aa3.99□□□□□ -1.77
ABP140YOR239W LEU1P07264 779 aaKnown RBP3.98□□□□□ -1.77
ABP140YOR239W LPD1P09624 499 aaKnown RBP3.98□□□□□ -1.77
ABP140YOR239W YAP1P19880 650 aaKnown RBP3.98□□□□□ -1.77
ABP140YOR239W RPB4P20433 221 aaPredicted RBP3.98□□□□□ -1.77
ABP140YOR239W MSB1P21339 1137 aaKnown RBP3.98□□□□□ -1.77
ABP140YOR239W UBA1P22515 1024 aaKnown RBP3.98□□□□□ -1.77
ABP140YOR239W CNA1P23287 553 aa3.98□□□□□ -1.77
ABP140YOR239W PLC1P32383 869 aa3.98□□□□□ -1.77
ABP140YOR239W PEP7P32609 515 aa3.98□□□□□ -1.77
ABP140YOR239W YKR015CP36111 568 aa3.98□□□□□ -1.77
ABP140YOR239W PGM2P37012 569 aaKnown RBP3.98□□□□□ -1.77
ABP140YOR239W MAL33P38157 468 aa3.98□□□□□ -1.77
ABP140YOR239W MRX3P38172 270 aa3.98□□□□□ -1.77
ABP140YOR239W SWD1P39706 426 aa3.98□□□□□ -1.77
ABP140YOR239W YTA6P40328 754 aa3.98□□□□□ -1.77
ABP140YOR239W IRR1P40541 1150 aa3.98□□□□□ -1.77
ABP140YOR239W UBP6P43593 499 aaKnown RBP3.98□□□□□ -1.77
ABP140YOR239W URB2P47108 1174 aa3.98□□□□□ -1.77
ABP140YOR239W RNR4P49723 345 aaKnown RBP3.98□□□□□ -1.77
ABP140YOR239W PEX21P50091 288 aa3.98□□□□□ -1.77
ABP140YOR239W MCM6P53091 1017 aaKnown RBP3.98□□□□□ -1.77
ABP140YOR239W IPI3P53877 555 aa3.98□□□□□ -1.77
ABP140YOR239W YNL115CP53925 644 aa3.98□□□□□ -1.77
ABP140YOR239W ATP25Q03153 612 aa3.98□□□□□ -1.77
ABP140YOR239W YML020WQ03722 664 aa3.98□□□□□ -1.77
ABP140YOR239W JIP5Q06214 492 aaPredicted RBP3.98□□□□□ -1.77
ABP140YOR239W OPY2Q06810 360 aa3.98□□□□□ -1.77
ABP140YOR239W MEU1Q07938 337 aaKnown RBP RIP-Chip data3.98□□□□□ -1.77not detected
ABP140YOR239W LAM6Q08001 693 aa3.98□□□□□ -1.77
ABP140YOR239W ALR1Q08269 859 aa3.98□□□□□ -1.77
ABP140YOR239W SOG2Q08817 791 aa3.98□□□□□ -1.77
ABP140YOR239W UIP4Q08926 304 aa3.98□□□□□ -1.77
ABP140YOR239W ELG1Q12050 791 aa3.98□□□□□ -1.77
ABP140YOR239W ACF2Q12168 779 aa3.98□□□□□ -1.77
ABP140YOR239W RIB2Q12362 591 aaKnown RBP3.98□□□□□ -1.77
ABP140YOR239W RTP1Q12751 981 aa3.98□□□□□ -1.77
ABP140YOR239W YBL113CQ7M4S9 792 aa3.98□□□□□ -1.77
ABP140YOR239W VMR1P38735 1592 aa3.98□□□□□ -1.77
ABP140YOR239W PIF1P07271 859 aa3.98□□□□□ -1.77
ABP140YOR239W REC107P21651 314 aa3.98□□□□□ -1.77
ABP140YOR239W RPA135P22138 1203 aaKnown RBP3.98□□□□□ -1.77
ABP140YOR239W PHO3P24031 467 aa3.98□□□□□ -1.77
ABP140YOR239W CLB2P24869 491 aa3.98□□□□□ -1.77
ABP140YOR239W MVD1P32377 396 aaKnown RBP3.98□□□□□ -1.77
ABP140YOR239W UBC6P33296 250 aaPredicted RBP3.98□□□□□ -1.77
ABP140YOR239W SAS3P34218 831 aa3.98□□□□□ -1.77
ABP140YOR239W YKL063CP35725 167 aa3.98□□□□□ -1.77
ABP140YOR239W JNM1P36224 373 aa3.98□□□□□ -1.77
ABP140YOR239W GEF1P37020 779 aa3.98□□□□□ -1.77
ABP140YOR239W PCF11P39081 626 aaPredicted RBP3.98□□□□□ -1.77
ABP140YOR239W ESL1P40456 1118 aa3.98□□□□□ -1.77
ABP140YOR239W MKT1P40850 830 aaKnown RBP3.98□□□□□ -1.77
ABP140YOR239W MDV1P47025 714 aa3.98□□□□□ -1.77
ABP140YOR239W SSN8P47821 323 aa3.98□□□□□ -1.77
ABP140YOR239W OCA1P50946 238 aaPredicted RBP3.98□□□□□ -1.77
ABP140YOR239W PKH3Q03306 898 aaPredicted RBP3.98□□□□□ -1.77
ABP140YOR239W DYN3Q04949 312 aa3.98□□□□□ -1.77
ABP140YOR239W MDM36Q06820 579 aa3.98□□□□□ -1.77
ABP140YOR239W BUD20Q08004 166 aaPredicted RBP3.98□□□□□ -1.77
ABP140YOR239W DCS2Q12123 353 aa3.98□□□□□ -1.77
ABP140YOR239W GET4Q12125 312 aa3.98□□□□□ -1.77
ABP140YOR239W POM152P39685 1337 aa3.97□□□□□ -1.77
ABP140YOR239W TEF1P02994 458 aaKnown RBP3.97□□□□□ -1.77
ABP140YOR239W RPS3P05750 240 aaKnown RBP3.97□□□□□ -1.77
ABP140YOR239W ERG12P07277 443 aa3.97□□□□□ -1.77
ABP140YOR239W RPB2P08518 1224 aaKnown RBP3.97□□□□□ -1.77
ABP140YOR239W FUS1P11710 512 aa3.97□□□□□ -1.77
ABP140YOR239W ADY2P25613 283 aa3.97□□□□□ -1.77
ABP140YOR239W APL1P27351 700 aa3.97□□□□□ -1.77
ABP140YOR239W SSE1P32589 693 aaKnown RBP3.97□□□□□ -1.77
ABP140YOR239W SMC1P32908 1225 aa3.97□□□□□ -1.77
ABP140YOR239W YKT6P36015 200 aaKnown RBP3.97□□□□□ -1.77
ABP140YOR239W RFT1P38206 574 aaPredicted RBP3.97□□□□□ -1.77
ABP140YOR239W EFM4P40516 257 aa3.97□□□□□ -1.77
ABP140YOR239W SNL1P40548 159 aa3.97□□□□□ -1.77
ABP140YOR239W NOP9P47077 666 aaKnown RBP3.97□□□□□ -1.77
ABP140YOR239W YJL007CP47080 104 aa3.97□□□□□ -1.77
ABP140YOR239W BFA1P47113 574 aa3.97□□□□□ -1.77
ABP140YOR239W ALT1P52893 592 aa3.97□□□□□ -1.77
ABP140YOR239W YGR054WP53235 642 aaKnown RBP3.97□□□□□ -1.77
ABP140YOR239W MDR1P53258 950 aa3.97□□□□□ -1.77
ABP140YOR239W CEG1Q01159 459 aaPredicted RBP3.97□□□□□ -1.77
ABP140YOR239W CTF4Q01454 927 aa3.97□□□□□ -1.77
ABP140YOR239W RPM2Q02773 1202 aa3.97□□□□□ -1.77
ABP140YOR239W SNZ1Q03148 297 aa3.97□□□□□ -1.77
ABP140YOR239W USA1Q03714 838 aa3.97□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 19 ms