RNA–Protein interactions for RNA: YIL171W

YIL171W, Transcript of Possible pseudogene in strain S288C, yeast

Gene YIL171W, Length 330 nt, Biotype pseudogene.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YIL171W	YIL171W	XRS2	P33301	854 aa		4.61	□□□□□ -1.67
YIL171W	YIL171W	PHO88	P38264	188 aa	Predicted RBP	4.61	□□□□□ -1.67
YIL171W	YIL171W	EFM2	P38347	419 aa		4.61	□□□□□ -1.67
YIL171W	YIL171W	ERG7	P38604	731 aa		4.61	□□□□□ -1.67
YIL171W	YIL171W	MIP6	P38760	659 aa	Known RBP	4.61	□□□□□ -1.67
YIL171W	YIL171W	PAN5	P38787	379 aa		4.61	□□□□□ -1.67
YIL171W	YIL171W	NDT80	P38830	627 aa		4.61	□□□□□ -1.67
YIL171W	YIL171W	SKN7	P38889	622 aa		4.61	□□□□□ -1.67
YIL171W	YIL171W	RPN3	P40016	523 aa	Known RBP	4.61	□□□□□ -1.67
YIL171W	YIL171W	YTA6	P40328	754 aa		4.61	□□□□□ -1.67
YIL171W	YIL171W	SGM1	P47166	707 aa		4.61	□□□□□ -1.67
YIL171W	YIL171W	COS5	P47187	383 aa		4.61	□□□□□ -1.67
YIL171W	YIL171W	TCB2	P48231	1178 aa		4.61	□□□□□ -1.67
YIL171W	YIL171W	LIF1	P53150	421 aa		4.61	□□□□□ -1.67
YIL171W	YIL171W	GUP1	P53154	560 aa		4.61	□□□□□ -1.67
YIL171W	YIL171W	YAF9	P53930	226 aa		4.61	□□□□□ -1.67
YIL171W	YIL171W	SEC5	P89102	971 aa		4.61	□□□□□ -1.67
YIL171W	YIL171W	CWC15	Q03772	175 aa	Known RBP	4.61	□□□□□ -1.67
YIL171W	YIL171W	RBA50	Q04418	439 aa		4.61	□□□□□ -1.67
YIL171W	YIL171W	YPR078C	Q06813	372 aa		4.61	□□□□□ -1.67
YIL171W	YIL171W	PLP2	Q12017	286 aa		4.61	□□□□□ -1.67
YIL171W	YIL171W	CSR2	Q12734	1121 aa		4.61	□□□□□ -1.67
YIL171W	YIL171W	TY1B-A	O13527	1196 aa	Known RBP	4.6	□□□□□ -1.67
YIL171W	YIL171W	PGK1	P00560	416 aa	Known RBP	4.6	□□□□□ -1.67
YIL171W	YIL171W	SRD1	P09007	221 aa		4.6	□□□□□ -1.67
YIL171W	YIL171W	SSA1	P10591	642 aa	Known RBP	4.6	□□□□□ -1.67
YIL171W	YIL171W	SAM1	P10659	382 aa	Known RBP	4.6	□□□□□ -1.67
YIL171W	YIL171W	RAD18	P10862	487 aa		4.6	□□□□□ -1.67
YIL171W	YIL171W	SSB1	P11484	613 aa	Known RBP	4.6	□□□□□ -1.67
YIL171W	YIL171W	CLN3	P13365	580 aa		4.6	□□□□□ -1.67
YIL171W	YIL171W	VMA2	P16140	517 aa	Known RBP	4.6	□□□□□ -1.67
YIL171W	YIL171W	PHO87	P25360	923 aa		4.6	□□□□□ -1.67
YIL171W	YIL171W	PER1	P25625	357 aa		4.6	□□□□□ -1.67
YIL171W	YIL171W	APL1	P27351	700 aa		4.6	□□□□□ -1.67
YIL171W	YIL171W	SRB4	P32569	687 aa		4.6	□□□□□ -1.67
YIL171W	YIL171W	VPS35	P34110	944 aa		4.6	□□□□□ -1.67
YIL171W	YIL171W	ATG19	P35193	415 aa		4.6	□□□□□ -1.67
YIL171W	YIL171W	PEA2	P40091	420 aa		4.6	□□□□□ -1.67
YIL171W	YIL171W	SSB2	P40150	613 aa	Known RBP	4.6	□□□□□ -1.67
YIL171W	YIL171W	THI6	P41835	540 aa		4.6	□□□□□ -1.67
YIL171W	YIL171W	AIP1	P46680	615 aa	Known RBP	4.6	□□□□□ -1.67
YIL171W	YIL171W	CCM1	P48237	864 aa	Predicted RBP	4.6	□□□□□ -1.67
YIL171W	YIL171W	TOF1	P53840	1238 aa		4.6	□□□□□ -1.67
YIL171W	YIL171W	CRD1	Q07560	283 aa		4.6	□□□□□ -1.67
YIL171W	YIL171W	HMI1	Q12039	706 aa		4.6	□□□□□ -1.67
YIL171W	YIL171W	MED1	Q12321	566 aa		4.6	□□□□□ -1.67
YIL171W	YIL171W	YEL076C-A	P0CX16	216 aa		4.59	□□□□□ -1.67
YIL171W	YIL171W	YLR464W	P0CX17	216 aa		4.59	□□□□□ -1.67
YIL171W	YIL171W	DBP5	P20449	482 aa	Known RBP	4.59	□□□□□ -1.67
YIL171W	YIL171W	SPO11	P23179	398 aa		4.59	□□□□□ -1.67
YIL171W	YIL171W	YEL043W	P32618	956 aa		4.59	□□□□□ -1.67
YIL171W	YIL171W	JNM1	P36224	373 aa		4.59	□□□□□ -1.67
YIL171W	YIL171W	UBP13	P38187	747 aa		4.59	□□□□□ -1.67
YIL171W	YIL171W	MCX1	P38323	520 aa	Predicted RBP	4.59	□□□□□ -1.67
YIL171W	YIL171W	YMR124W	P39523	943 aa	Known RBP	4.59	□□□□□ -1.67
YIL171W	YIL171W	YEL076C	P39971	216 aa		4.59	□□□□□ -1.67
YIL171W	YIL171W	VFA1	P40080	203 aa		4.59	□□□□□ -1.67
YIL171W	YIL171W	NUP82	P40368	713 aa		4.59	□□□□□ -1.67
YIL171W	YIL171W	CEP3	P40969	608 aa		4.59	□□□□□ -1.67
YIL171W	YIL171W	PRP31	P49704	494 aa	Predicted RBP	4.59	□□□□□ -1.67
YIL171W	YIL171W	MTO1	P53070	669 aa		4.59	□□□□□ -1.67
YIL171W	YIL171W	ZPR1	P53303	486 aa	Known RBP	4.59	□□□□□ -1.67
YIL171W	YIL171W	ALF1	P53904	254 aa		4.59	□□□□□ -1.67
YIL171W	YIL171W	NCS2	P53923	493 aa	Predicted RBP	4.59	□□□□□ -1.67
YIL171W	YIL171W	DMA2	P53924	522 aa		4.59	□□□□□ -1.67
YIL171W	YIL171W	ALD6	P54115	500 aa	Known RBP	4.59	□□□□□ -1.67
YIL171W	YIL171W	UME1	Q03010	460 aa		4.59	□□□□□ -1.67
YIL171W	YIL171W	YLR278C	Q05854	1341 aa		4.59	□□□□□ -1.67
YIL171W	YIL171W	COG4	Q06096	861 aa		4.59	□□□□□ -1.67
YIL171W	YIL171W	MLH2	Q07980	695 aa		4.59	□□□□□ -1.67
YIL171W	YIL171W	YOL075C	Q08234	1294 aa		4.59	□□□□□ -1.67
YIL171W	YIL171W	ARP6	Q12509	438 aa		4.59	□□□□□ -1.67
YIL171W	YIL171W	PET111	P08468	800 aa		4.58	□□□□□ -1.68
YIL171W	YIL171W	FBP1	P09201	348 aa		4.58	□□□□□ -1.68
YIL171W	YIL171W	PCK1	P10963	549 aa		4.58	□□□□□ -1.68
YIL171W	YIL171W	TCP1	P12612	559 aa	Known RBP	4.58	□□□□□ -1.68
YIL171W	YIL171W	SEC23	P15303	768 aa	Known RBP	4.58	□□□□□ -1.68
YIL171W	YIL171W	ISY1	P21374	235 aa	Predicted RBP	4.58	□□□□□ -1.68
YIL171W	YIL171W	UBC1	P21734	215 aa	Known RBP	4.58	□□□□□ -1.68
YIL171W	YIL171W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	not detected
YIL171W	YIL171W	CDC60	P26637	1090 aa	Known RBP	4.58	□□□□□ -1.68
YIL171W	YIL171W	SUV3	P32580	737 aa		4.58	□□□□□ -1.68
YIL171W	YIL171W	SMC1	P32908	1225 aa		4.58	□□□□□ -1.68
YIL171W	YIL171W	STO1	P34160	861 aa	Known RBP	4.58	□□□□□ -1.68
YIL171W	YIL171W	PCH2	P38126	564 aa		4.58	□□□□□ -1.68
YIL171W	YIL171W	REI1	P38344	393 aa	Predicted RBP	4.58	□□□□□ -1.68
YIL171W	YIL171W	SEC9	P40357	651 aa		4.58	□□□□□ -1.68
YIL171W	YIL171W	SHQ1	P40486	507 aa	Predicted RBP	4.58	□□□□□ -1.68
YIL171W	YIL171W	IES1	P43579	692 aa		4.58	□□□□□ -1.68
YIL171W	YIL171W	VPS53	P47061	822 aa		4.58	□□□□□ -1.68
YIL171W	YIL171W	ROM1	P53046	1155 aa		4.58	□□□□□ -1.68
YIL171W	YIL171W	VID30	P53076	958 aa		4.58	□□□□□ -1.68
YIL171W	YIL171W	RRT6	P53117	311 aa	Predicted RBP	4.58	□□□□□ -1.68
YIL171W	YIL171W	CAF130	P53280	1122 aa	Predicted RBP	4.58	□□□□□ -1.68
YIL171W	YIL171W	ERG5	P54781	538 aa		4.58	□□□□□ -1.68
YIL171W	YIL171W	ORC4	P54791	529 aa		4.58	□□□□□ -1.68
YIL171W	YIL171W	PHM6	Q05637	104 aa		4.58	□□□□□ -1.68
YIL171W	YIL171W	TSR1	Q07381	788 aa	Known RBP	4.58	□□□□□ -1.68
YIL171W	YIL171W	SMC5	Q08204	1093 aa		4.58	□□□□□ -1.68
YIL171W	YIL171W	YPL277C	Q08989	487 aa		4.58	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 56.4 ms