RNA–Protein interactions for RNA: YER164W

CHD1, Transcript of Chromatin remodeler that regulates various aspects of transcription, yeastyeast

Gene CHD1, Length 4,407 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CHD1YER164W RNR4P49723 345 aaKnown RBP3.97□□□□□ -1.77
CHD1YER164W YGR016WP53209 190 aa3.97□□□□□ -1.77
CHD1YER164W TMA20P89886 181 aaPredicted RBP3.97□□□□□ -1.77
CHD1YER164W STE20Q03497 939 aaKnown RBP3.97□□□□□ -1.77
CHD1YER164W YAP7Q08182 245 aa3.97□□□□□ -1.77
CHD1YER164W ECM4P36156 370 aa3.97□□□□□ -1.77
CHD1YER164W SLI15P38283 698 aa3.97□□□□□ -1.77
CHD1YER164W DAK2P43550 591 aa3.97□□□□□ -1.77
CHD1YER164W RSC8P43609 557 aaKnown RBP3.97□□□□□ -1.77
CHD1YER164W CTK3P46963 296 aaPredicted RBP3.97□□□□□ -1.77
CHD1YER164W GLG2P47011 380 aa3.97□□□□□ -1.77
CHD1YER164W FAR8Q05040 523 aa3.97□□□□□ -1.77
CHD1YER164W SKG3Q06315 1026 aa3.97□□□□□ -1.77
CHD1YER164W CEX1Q12453 761 aa3.97□□□□□ -1.77
CHD1YER164W SEM1O94742 89 aa3.97□□□□□ -1.77
CHD1YER164W FBP1P09201 348 aa3.97□□□□□ -1.77
CHD1YER164W KIN1P13185 1064 aa3.97□□□□□ -1.77
CHD1YER164W VPS3P23643 1011 aa3.97□□□□□ -1.77
CHD1YER164W SNT1P25357 1226 aa3.97□□□□□ -1.77
CHD1YER164W BRF1P29056 596 aa3.97□□□□□ -1.77
CHD1YER164W PAP1P29468 568 aaKnown RBP3.97□□□□□ -1.77
CHD1YER164W ZIP1P31111 875 aa3.97□□□□□ -1.77
CHD1YER164W RPC82P32349 654 aa3.97□□□□□ -1.77
CHD1YER164W NPL4P33755 580 aa3.97□□□□□ -1.77
CHD1YER164W SSP1P38871 571 aa3.97□□□□□ -1.77
CHD1YER164W REV7P38927 245 aa3.97□□□□□ -1.77
CHD1YER164W SSP120P39931 234 aaKnown RBP3.97□□□□□ -1.77
CHD1YER164W EMP47P43555 445 aa3.97□□□□□ -1.77
CHD1YER164W RET3P53600 189 aa3.97□□□□□ -1.77
CHD1YER164W UTP6Q02354 440 aaKnown RBP3.97□□□□□ -1.77
CHD1YER164W YDR278CQ05612 105 aa3.97□□□□□ -1.77
CHD1YER164W NDL1Q06568 189 aa3.97□□□□□ -1.77
CHD1YER164W ALR1Q08269 859 aa3.97□□□□□ -1.77
CHD1YER164W ARP6Q12509 438 aa3.97□□□□□ -1.77
CHD1YER164W YCR016WP25617 290 aaKnown RBP3.96□□□□□ -1.77
CHD1YER164W BMH1P29311 267 aaKnown RBP3.96□□□□□ -1.77
CHD1YER164W HSP78P33416 811 aa3.96□□□□□ -1.77
CHD1YER164W LHS1P36016 881 aa3.96□□□□□ -1.77
CHD1YER164W MCD4P36051 919 aa3.96□□□□□ -1.77
CHD1YER164W PGM2P37012 569 aaKnown RBP3.96□□□□□ -1.77
CHD1YER164W ECM2P38241 364 aaKnown RBP3.96□□□□□ -1.77
CHD1YER164W RMR1P53060 241 aa3.96□□□□□ -1.77
CHD1YER164W MMT1Q03218 510 aa3.96□□□□□ -1.77
CHD1YER164W FIN1Q03898 291 aa3.96□□□□□ -1.77
CHD1YER164W AIM7Q12156 149 aa3.96□□□□□ -1.77
CHD1YER164W RPL22AP05749 121 aaKnown RBP3.96□□□□□ -1.78
CHD1YER164W TUP1P16649 713 aa3.96□□□□□ -1.78
CHD1YER164W RPN2P32565 945 aaKnown RBP3.96□□□□□ -1.78
CHD1YER164W PXL1P36166 706 aa3.96□□□□□ -1.78
CHD1YER164W SMF1P38925 575 aa3.96□□□□□ -1.78
CHD1YER164W VPS45P38932 577 aa3.96□□□□□ -1.78
CHD1YER164W BIM1P40013 344 aa3.96□□□□□ -1.78
CHD1YER164W IES1P43579 692 aa3.96□□□□□ -1.78
CHD1YER164W YJR079WP47126 109 aa3.96□□□□□ -1.78
CHD1YER164W ERB1Q04660 807 aaKnown RBP3.96□□□□□ -1.78
CHD1YER164W SOV1Q04748 898 aa3.96□□□□□ -1.78
CHD1YER164W ATG20Q07528 640 aa3.96□□□□□ -1.78
CHD1YER164W SGT2Q12118 346 aaKnown RBP3.96□□□□□ -1.78
CHD1YER164W DBP10Q12389 995 aaKnown RBP3.96□□□□□ -1.78
CHD1YER164W MYO1P08964 1928 aa3.96□□□□□ -1.78
CHD1YER164W NAT1P12945 854 aaKnown RBP3.96□□□□□ -1.78
CHD1YER164W GFA1P14742 717 aaKnown RBP3.96□□□□□ -1.78
CHD1YER164W MSM1P22438 575 aa3.96□□□□□ -1.78
CHD1YER164W OAF3P36023 863 aa3.96□□□□□ -1.78
CHD1YER164W GAA1P39012 614 aa3.96□□□□□ -1.78
CHD1YER164W BUD16P39988 312 aa3.96□□□□□ -1.78
CHD1YER164W GTT3P39996 337 aa3.96□□□□□ -1.78
CHD1YER164W VPS53P47061 822 aa3.96□□□□□ -1.78
CHD1YER164W RPL6AQ02326 176 aaKnown RBP3.96□□□□□ -1.78
CHD1YER164W HOT1Q03213 719 aa3.96□□□□□ -1.78
CHD1YER164W SXM1Q04175 944 aaKnown RBP3.96□□□□□ -1.78
CHD1YER164W PCL8Q08966 492 aa3.96□□□□□ -1.78
CHD1YER164W PSF3Q12146 194 aa3.96□□□□□ -1.78
CHD1YER164W PMR1P13586 950 aa3.96□□□□□ -1.78
CHD1YER164W GCN3P14741 305 aa3.96□□□□□ -1.78
CHD1YER164W ESS1P22696 170 aa3.96□□□□□ -1.78
CHD1YER164W DSF2P38213 736 aa3.96□□□□□ -1.78
CHD1YER164W CST26P38226 397 aa3.96□□□□□ -1.78
CHD1YER164W TPS3P38426 1054 aaKnown RBP3.96□□□□□ -1.78
CHD1YER164W KIC1P38692 1080 aa3.96□□□□□ -1.78
CHD1YER164W SHQ1P40486 507 aaPredicted RBP3.96□□□□□ -1.78
CHD1YER164W ADA2Q02336 434 aa3.96□□□□□ -1.78
CHD1YER164W MIP1P15801 1254 aa3.95□□□□□ -1.78
CHD1YER164W PFK1P16861 987 aaKnown RBP3.95□□□□□ -1.78
CHD1YER164W STE11P23561 717 aa3.95□□□□□ -1.78
CHD1YER164W VPH2P32341 215 aa3.95□□□□□ -1.78
CHD1YER164W SSZ1P38788 538 aaKnown RBP3.95□□□□□ -1.78
CHD1YER164W GGA2P38817 585 aaKnown RBP3.95□□□□□ -1.78
CHD1YER164W SHC1P39000 512 aa3.95□□□□□ -1.78
CHD1YER164W CCM1P48237 864 aaPredicted RBP3.95□□□□□ -1.78
CHD1YER164W RBL2P48606 106 aaKnown RBP3.95□□□□□ -1.78
CHD1YER164W ORC4P54791 529 aa3.95□□□□□ -1.78
CHD1YER164W CEF1Q03654 590 aaPredicted RBP3.95□□□□□ -1.78
CHD1YER164W TMA64Q04600 565 aaKnown RBP3.95□□□□□ -1.78
CHD1YER164W SEC10Q06245 871 aa3.95□□□□□ -1.78
CHD1YER164W GNT1Q12096 491 aa3.95□□□□□ -1.78
CHD1YER164W PPR1P07272 904 aaPredicted RBP3.95□□□□□ -1.78
CHD1YER164W SEC23P15303 768 aaKnown RBP3.95□□□□□ -1.78
CHD1YER164W MSB1P21339 1137 aaKnown RBP3.95□□□□□ -1.78
CHD1YER164W MCM3P24279 971 aaKnown RBP3.95□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 9.9 ms