RNA–Protein interactions for RNA: YDR498C

SEC20, Transcript of Membrane glycoprotein v-SNARE, yeastyeast

Gene SEC20, Length 1,152 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC20YDR498C TYW1Q08960 810 aaKnown RBP6.22□□□□□ -1.41
SEC20YDR498C SLX4Q12098 748 aa6.22□□□□□ -1.41
SEC20YDR498C YDL206WQ12424 762 aa6.22□□□□□ -1.41
SEC20YDR498C VMA2P16140 517 aaKnown RBP6.21□□□□□ -1.42
SEC20YDR498C SSA4P22202 642 aaKnown RBP6.21□□□□□ -1.42
SEC20YDR498C SLY41P22215 453 aa6.21□□□□□ -1.42
SEC20YDR498C SCJ1P25303 377 aa6.21□□□□□ -1.42
SEC20YDR498C EUG1P32474 517 aa6.21□□□□□ -1.42
SEC20YDR498C LTV1P34078 463 aa6.21□□□□□ -1.42
SEC20YDR498C SAD1P43589 448 aa6.21□□□□□ -1.42
SEC20YDR498C NET1P47035 1189 aa6.21□□□□□ -1.42
SEC20YDR498C YGR125WP53273 1036 aa6.21□□□□□ -1.42
SEC20YDR498C BTN2P53286 410 aa6.21□□□□□ -1.42
SEC20YDR498C ZPR1P53303 486 aaKnown RBP6.21□□□□□ -1.42
SEC20YDR498C MAL13P53338 473 aa6.21□□□□□ -1.42
SEC20YDR498C VPS60Q03390 229 aa6.21□□□□□ -1.42
SEC20YDR498C UTP5Q04177 643 aaKnown RBP6.21□□□□□ -1.42
SEC20YDR498C UTP14Q04500 899 aaKnown RBP6.21□□□□□ -1.42
SEC20YDR498C COQ9Q05779 260 aa6.21□□□□□ -1.42
SEC20YDR498C DAS2Q12084 232 aa6.21□□□□□ -1.42
SEC20YDR498C CFT2Q12102 859 aaPredicted RBP6.21□□□□□ -1.42
SEC20YDR498C GFA1P14742 717 aaKnown RBP6.2□□□□□ -1.42
SEC20YDR498C DBP5P20449 482 aaKnown RBP6.2□□□□□ -1.42
SEC20YDR498C CKI1P20485 582 aa6.2□□□□□ -1.42
SEC20YDR498C IME1P21190 360 aa6.2□□□□□ -1.42
SEC20YDR498C KIN82P25341 720 aa6.2□□□□□ -1.42
SEC20YDR498C PAT1P25644 796 aaKnown RBP6.2□□□□□ -1.42
SEC20YDR498C NIP100P33420 868 aa6.2□□□□□ -1.42
SEC20YDR498C MCD4P36051 919 aa6.2□□□□□ -1.42
SEC20YDR498C GPB2P39717 880 aa6.2□□□□□ -1.42
SEC20YDR498C VAB2P40003 282 aa6.2□□□□□ -1.42
SEC20YDR498C NDC80P40460 691 aa6.2□□□□□ -1.42
SEC20YDR498C ZAP1P47043 880 aa6.2□□□□□ -1.42
SEC20YDR498C RPS7BP48164 190 aaKnown RBP6.2□□□□□ -1.42
SEC20YDR498C UBP15P50101 1230 aa6.2□□□□□ -1.42
SEC20YDR498C VID30P53076 958 aa6.2□□□□□ -1.42
SEC20YDR498C RRT6P53117 311 aaPredicted RBP6.2□□□□□ -1.42
SEC20YDR498C PPM1Q04081 328 aa6.2□□□□□ -1.42
SEC20YDR498C POB3Q04636 552 aaKnown RBP6.2□□□□□ -1.42
SEC20YDR498C DON1Q05610 365 aa6.2□□□□□ -1.42
SEC20YDR498C YPR078CQ06813 372 aa6.2□□□□□ -1.42
SEC20YDR498C RLP24Q07915 199 aaKnown RBP6.2□□□□□ -1.42
SEC20YDR498C PLP2Q12017 286 aa6.2□□□□□ -1.42
SEC20YDR498C MMP1Q12372 583 aa6.2□□□□□ -1.42
SEC20YDR498C NOP14Q99207 810 aaKnown RBP6.2□□□□□ -1.42
SEC20YDR498C HVG1P0CE11 249 aa6.19□□□□□ -1.42
SEC20YDR498C CHS2P14180 963 aa6.19□□□□□ -1.42
SEC20YDR498C RPO26P20435 155 aa6.19□□□□□ -1.42
SEC20YDR498C PKC1P24583 1151 aa6.19□□□□□ -1.42
SEC20YDR498C CDC48P25694 835 aaKnown RBP6.19□□□□□ -1.42
SEC20YDR498C JNM1P36224 373 aa6.19□□□□□ -1.42
SEC20YDR498C FLR1P38124 548 aa6.19□□□□□ -1.42
SEC20YDR498C UBP13P38187 747 aa6.19□□□□□ -1.42
SEC20YDR498C RTT102P53330 157 aa6.19□□□□□ -1.42
SEC20YDR498C HST2P53686 357 aa6.19□□□□□ -1.42
SEC20YDR498C ATG23Q06671 453 aa6.19□□□□□ -1.42
SEC20YDR498C NOC3Q07896 663 aaPredicted RBP6.19□□□□□ -1.42
SEC20YDR498C IES4Q08561 116 aa6.19□□□□□ -1.42
SEC20YDR498C YKL068W-AQ3E826 78 aa6.19□□□□□ -1.42
SEC20YDR498C TY1B-AO13527 1196 aaKnown RBP6.18□□□□□ -1.42
SEC20YDR498C SPT2P06843 333 aaPredicted RBP6.18□□□□□ -1.42
SEC20YDR498C CDC42P19073 191 aa6.18□□□□□ -1.42
SEC20YDR498C MUD1P32605 298 aaKnown RBP6.18□□□□□ -1.42
SEC20YDR498C COT1P32798 439 aa6.18□□□□□ -1.42
SEC20YDR498C ASH1P34233 588 aa6.18□□□□□ -1.42
SEC20YDR498C TVP38P36164 337 aa6.18□□□□□ -1.42
SEC20YDR498C CCT4P39078 528 aaKnown RBP6.18□□□□□ -1.42
SEC20YDR498C CIN4P39110 191 aa6.18□□□□□ -1.42
SEC20YDR498C CSN12P47130 423 aa6.18□□□□□ -1.42
SEC20YDR498C ORC5P50874 479 aa6.18□□□□□ -1.42
SEC20YDR498C TUB4P53378 473 aa6.18□□□□□ -1.42
SEC20YDR498C YNL146WP53906 100 aa6.18□□□□□ -1.42
SEC20YDR498C ESBP6P53918 673 aa6.18□□□□□ -1.42
SEC20YDR498C VTC3Q02725 835 aa6.18□□□□□ -1.42
SEC20YDR498C URH1Q04179 340 aa6.18□□□□□ -1.42
SEC20YDR498C RBA50Q04418 439 aa6.18□□□□□ -1.42
SEC20YDR498C SDH2P21801 266 aa6.17□□□□□ -1.42
SEC20YDR498C CAP1P28495 268 aaKnown RBP6.17□□□□□ -1.42
SEC20YDR498C KIP1P28742 1111 aa6.17□□□□□ -1.42
SEC20YDR498C TFC4P33339 1025 aa6.17□□□□□ -1.42
SEC20YDR498C EXO5P38289 585 aa6.17□□□□□ -1.42
SEC20YDR498C RCK2P38623 610 aa6.17□□□□□ -1.42
SEC20YDR498C SMC2P38989 1170 aaKnown RBP6.17□□□□□ -1.42
SEC20YDR498C YEL025CP39991 1188 aa6.17□□□□□ -1.42
SEC20YDR498C MIC19P43594 170 aa6.17□□□□□ -1.42
SEC20YDR498C VPS53P47061 822 aa6.17□□□□□ -1.42
SEC20YDR498C CLA4P48562 842 aa6.17□□□□□ -1.42
SEC20YDR498C YGR021WP53212 290 aa6.17□□□□□ -1.42
SEC20YDR498C GIR2Q03768 265 aaPredicted RBP6.17□□□□□ -1.42
SEC20YDR498C GYL1Q04322 720 aa6.17□□□□□ -1.42
SEC20YDR498C YMR114CQ04471 368 aaKnown RBP6.17□□□□□ -1.42
SEC20YDR498C SFH1Q06168 426 aa6.17□□□□□ -1.42
SEC20YDR498C GPI13Q07830 1017 aa6.17□□□□□ -1.42
SEC20YDR498C UBR2Q07963 1872 aa6.16□□□□□ -1.42
SEC20YDR498C RNR1P21524 888 aaKnown RBP6.16□□□□□ -1.42
SEC20YDR498C DAL2P25335 343 aa6.16□□□□□ -1.42
SEC20YDR498C MSH1P25846 959 aa6.16□□□□□ -1.42
SEC20YDR498C IRE1P32361 1115 aa6.16□□□□□ -1.42
SEC20YDR498C SRB4P32569 687 aa6.16□□□□□ -1.42
SEC20YDR498C YEL043WP32618 956 aa6.16□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 31.6 ms