RNA–Protein interactions for RNA: YDR213W

UPC2, Transcript of Sterol regulatory element binding protein, yeast

Gene UPC2, Length 2,742 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UPC2	YDR213W	YOR389W	Q08912	624 aa		4.55	□□□□□ -1.68
UPC2	YDR213W	TFB4	Q12004	338 aa		4.55	□□□□□ -1.68
UPC2	YDR213W	TRM11	Q12463	433 aa		4.55	□□□□□ -1.68
UPC2	YDR213W	YOR111W	Q99210	232 aa		4.55	□□□□□ -1.68
UPC2	YDR213W	HTA1	P04911	132 aa	Known RBP	4.55	□□□□□ -1.68
UPC2	YDR213W	HTA2	P04912	132 aa		4.55	□□□□□ -1.68
UPC2	YDR213W	RPL22A	P05749	121 aa	Known RBP	4.55	□□□□□ -1.68
UPC2	YDR213W	SUI3	P09064	285 aa	Known RBP	4.55	□□□□□ -1.68
UPC2	YDR213W	COQ1	P18900	473 aa		4.55	□□□□□ -1.68
UPC2	YDR213W	MEF1	P25039	761 aa		4.55	□□□□□ -1.68
UPC2	YDR213W	SUV3	P32580	737 aa		4.55	□□□□□ -1.68
UPC2	YDR213W	NIP100	P33420	868 aa		4.55	□□□□□ -1.68
UPC2	YDR213W	VPS35	P34110	944 aa		4.55	□□□□□ -1.68
UPC2	YDR213W	RRP8	P38961	392 aa	Known RBP	4.55	□□□□□ -1.68
UPC2	YDR213W	SAP185	P40856	1058 aa		4.55	□□□□□ -1.68
UPC2	YDR213W	EMW1	P42842	904 aa	Known RBP	4.55	□□□□□ -1.68
UPC2	YDR213W	YJR039W	P47107	1121 aa		4.55	□□□□□ -1.68
UPC2	YDR213W	BTN2	P53286	410 aa		4.55	□□□□□ -1.68
UPC2	YDR213W	YNL115C	P53925	644 aa		4.55	□□□□□ -1.68
UPC2	YDR213W	PTA1	Q01329	785 aa	Predicted RBP	4.55	□□□□□ -1.68
UPC2	YDR213W	SPO71	Q03868	1245 aa		4.55	□□□□□ -1.68
UPC2	YDR213W	SEY1	Q99287	776 aa		4.55	□□□□□ -1.68
UPC2	YDR213W	RPB2	P08518	1224 aa	Known RBP	4.54	□□□□□ -1.68
UPC2	YDR213W	URE2	P23202	354 aa	Known RBP	4.54	□□□□□ -1.68
UPC2	YDR213W	PRP45	P28004	379 aa	Predicted RBP	4.54	□□□□□ -1.68
UPC2	YDR213W	HIR1	P32479	840 aa		4.54	□□□□□ -1.68
UPC2	YDR213W	PEX2	P32800	271 aa		4.54	□□□□□ -1.68
UPC2	YDR213W	PET10	P36139	283 aa		4.54	□□□□□ -1.68
UPC2	YDR213W	BOI1	P38041	980 aa	Known RBP	4.54	□□□□□ -1.68
UPC2	YDR213W	ECM2	P38241	364 aa	Known RBP	4.54	□□□□□ -1.68
UPC2	YDR213W	AMN1	P38285	549 aa	Predicted RBP	4.54	□□□□□ -1.68
UPC2	YDR213W	LIN1	P38852	340 aa	Predicted RBP	4.54	□□□□□ -1.68
UPC2	YDR213W	CRG1	P38892	291 aa	RIP-Chip data	4.54	□□□□□ -1.68	not detected
UPC2	YDR213W	DSE1	P40077	573 aa		4.54	□□□□□ -1.68
UPC2	YDR213W	YIR042C	P40586	236 aa		4.54	□□□□□ -1.68
UPC2	YDR213W	RNR4	P49723	345 aa	Known RBP	4.54	□□□□□ -1.68
UPC2	YDR213W	KAP114	P53067	1004 aa		4.54	□□□□□ -1.68
UPC2	YDR213W	DON1	Q05610	365 aa		4.54	□□□□□ -1.68
UPC2	YDR213W	ECI1	Q05871	280 aa		4.54	□□□□□ -1.68
UPC2	YDR213W	OPY2	Q06810	360 aa		4.54	□□□□□ -1.68
UPC2	YDR213W	NOP12	Q08208	459 aa	Known RBP	4.54	□□□□□ -1.68
UPC2	YDR213W	TY1A-DR4	O74302	440 aa		4.54	□□□□□ -1.68
UPC2	YDR213W	TY1A-H	P0C2I4	478 aa	Known RBP	4.54	□□□□□ -1.68
UPC2	YDR213W	TY1A-A	P0CX57	440 aa		4.54	□□□□□ -1.68
UPC2	YDR213W	TY1A-PR1	P0CX58	440 aa		4.54	□□□□□ -1.68
UPC2	YDR213W	TY1A-OR	P0CX59	440 aa		4.54	□□□□□ -1.68
UPC2	YDR213W	TY1A-PR2	P0CX60	440 aa		4.54	□□□□□ -1.68
UPC2	YDR213W	TY1A-DR5	P0CX65	440 aa		4.54	□□□□□ -1.68
UPC2	YDR213W	TY1A-ER2	P0CX66	440 aa		4.54	□□□□□ -1.68
UPC2	YDR213W	TY1A-GR3	P0CX67	440 aa		4.54	□□□□□ -1.68
UPC2	YDR213W	TY1A-LR1	P0CX68	440 aa		4.54	□□□□□ -1.68
UPC2	YDR213W	TY1A-MR2	P0CX69	440 aa		4.54	□□□□□ -1.68
UPC2	YDR213W	BMH2	P34730	273 aa	Known RBP	4.54	□□□□□ -1.68
UPC2	YDR213W	UBP13	P38187	747 aa		4.54	□□□□□ -1.68
UPC2	YDR213W	OSH3	P38713	996 aa	Known RBP	4.54	□□□□□ -1.68
UPC2	YDR213W	BCD1	P38772	366 aa		4.54	□□□□□ -1.68
UPC2	YDR213W	SMC2	P38989	1170 aa	Known RBP	4.54	□□□□□ -1.68
UPC2	YDR213W	TY1A-JR2	P47099	440 aa		4.54	□□□□□ -1.68
UPC2	YDR213W	VID30	P53076	958 aa		4.54	□□□□□ -1.68
UPC2	YDR213W	TUB4	P53378	473 aa		4.54	□□□□□ -1.68
UPC2	YDR213W	FAR11	P53917	953 aa		4.54	□□□□□ -1.68
UPC2	YDR213W	ACL4	Q03771	387 aa		4.54	□□□□□ -1.68
UPC2	YDR213W	TY1A-DR1	Q03856	440 aa		4.54	□□□□□ -1.68
UPC2	YDR213W	PPM1	Q04081	328 aa		4.54	□□□□□ -1.68
UPC2	YDR213W	SHE9	Q04172	456 aa		4.54	□□□□□ -1.68
UPC2	YDR213W	SXM1	Q04175	944 aa	Known RBP	4.54	□□□□□ -1.68
UPC2	YDR213W	TY1A-ML1	Q04706	440 aa	Known RBP	4.54	□□□□□ -1.68
UPC2	YDR213W	YDR341C	Q05506	607 aa	Known RBP	4.54	□□□□□ -1.68
UPC2	YDR213W	YPQ2	Q06328	317 aa		4.54	□□□□□ -1.68
UPC2	YDR213W	VIP1	Q06685	1146 aa	Known RBP	4.54	□□□□□ -1.68
UPC2	YDR213W	SSF2	Q12153	453 aa	Predicted RBP	4.54	□□□□□ -1.68
UPC2	YDR213W	TY1A-BR	Q12217	440 aa		4.54	□□□□□ -1.68
UPC2	YDR213W	TY1A-NL2	Q12470	440 aa		4.54	□□□□□ -1.68
UPC2	YDR213W	TY1A-GR2	Q12485	440 aa		4.54	□□□□□ -1.68
UPC2	YDR213W	NAT1	P12945	854 aa	Known RBP	4.53	□□□□□ -1.68
UPC2	YDR213W	BRF1	P29056	596 aa		4.53	□□□□□ -1.68
UPC2	YDR213W	GYP6	P32806	458 aa		4.53	□□□□□ -1.68
UPC2	YDR213W	YKL050C	P35736	922 aa		4.53	□□□□□ -1.68
UPC2	YDR213W	ERC1	P38767	581 aa		4.53	□□□□□ -1.68
UPC2	YDR213W	ORM1	P53224	222 aa		4.53	□□□□□ -1.68
UPC2	YDR213W	DRN1	P53255	507 aa	Known RBP	4.53	□□□□□ -1.68
UPC2	YDR213W	COS6	P53344	381 aa		4.53	□□□□□ -1.68
UPC2	YDR213W	ESF2	P53743	316 aa	Known RBP	4.53	□□□□□ -1.68
UPC2	YDR213W	RPN8	Q08723	338 aa	Known RBP	4.53	□□□□□ -1.68
UPC2	YDR213W	AIM41	Q12032	185 aa		4.53	□□□□□ -1.68
UPC2	YDR213W	YRR1	Q12172	810 aa		4.53	□□□□□ -1.68
UPC2	YDR213W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.53	□□□□□ -1.68	not detected
UPC2	YDR213W	TAL1	P15019	335 aa	Known RBP	4.53	□□□□□ -1.68
UPC2	YDR213W	NAM7	P30771	971 aa	Known RBP	4.53	□□□□□ -1.68
UPC2	YDR213W	HXT1	P32465	570 aa		4.53	□□□□□ -1.68
UPC2	YDR213W	CSE1	P33307	960 aa		4.53	□□□□□ -1.68
UPC2	YDR213W	KTR2	P33550	425 aa		4.53	□□□□□ -1.68
UPC2	YDR213W	PET112	P33893	541 aa		4.53	□□□□□ -1.68
UPC2	YDR213W	RXT2	P38255	430 aa		4.53	□□□□□ -1.68
UPC2	YDR213W	TDA3	P38758	523 aa		4.53	□□□□□ -1.68
UPC2	YDR213W	OAF1	P39720	1047 aa	Predicted RBP	4.53	□□□□□ -1.68
UPC2	YDR213W	ALG5	P40350	334 aa		4.53	□□□□□ -1.68
UPC2	YDR213W	CSM2	P40465	213 aa		4.53	□□□□□ -1.68
UPC2	YDR213W	MDR1	P53258	950 aa		4.53	□□□□□ -1.68
UPC2	YDR213W	SDA1	P53313	767 aa	Known RBP	4.53	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 35.6 ms