RNA–Protein interactions for RNA: YOR005C

DNL4, Transcript of DNA ligase required for nonhomologous end-joining (NHEJ), yeastyeast

Gene DNL4, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DNL4YOR005C MRP10O75012 95 aa3□□□□□ -1.93
DNL4YOR005C YER152CP10356 443 aa3□□□□□ -1.93
DNL4YOR005C DBP2P24783 546 aaKnown RBP3□□□□□ -1.93
DNL4YOR005C DBF20P32328 564 aa3□□□□□ -1.93
DNL4YOR005C CDC12P32468 407 aaKnown RBP3□□□□□ -1.93
DNL4YOR005C KTR4P38131 464 aa3□□□□□ -1.93
DNL4YOR005C ERT1P38140 529 aa3□□□□□ -1.93
DNL4YOR005C MSC7P38694 644 aa3□□□□□ -1.93
DNL4YOR005C GUP1P53154 560 aa3□□□□□ -1.93
DNL4YOR005C MEC3Q02574 474 aa3□□□□□ -1.93
DNL4YOR005C ATG33Q06485 197 aa3□□□□□ -1.93
DNL4YOR005C RSC3Q06639 885 aa3□□□□□ -1.93
DNL4YOR005C RTP1Q12751 981 aa3□□□□□ -1.93
DNL4YOR005C RPP0P05317 312 aaKnown RBP3□□□□□ -1.93
DNL4YOR005C CDC4P07834 779 aa3□□□□□ -1.93
DNL4YOR005C DAL3P32459 195 aa3□□□□□ -1.93
DNL4YOR005C HOG1P32485 435 aa3□□□□□ -1.93
DNL4YOR005C IME2P32581 645 aa3□□□□□ -1.93
DNL4YOR005C EMC3P36039 253 aa3□□□□□ -1.93
DNL4YOR005C MCD4P36051 919 aa3□□□□□ -1.93
DNL4YOR005C HIS6P40545 261 aa3□□□□□ -1.93
DNL4YOR005C EAF7P53911 425 aaKnown RBP3□□□□□ -1.93
DNL4YOR005C PHM6Q05637 104 aa3□□□□□ -1.93
DNL4YOR005C RMP1Q12530 201 aa3□□□□□ -1.93
DNL4YOR005C HAP1P0CE41 1502 aa3□□□□□ -1.93
DNL4YOR005C DNF3Q12674 1656 aa3□□□□□ -1.93
DNL4YOR005C CDC19P00549 500 aaKnown RBP2.99□□□□□ -1.93
DNL4YOR005C RPL11AP0C0W9 174 aaKnown RBP2.99□□□□□ -1.93
DNL4YOR005C NPP1P25353 742 aa2.99□□□□□ -1.93
DNL4YOR005C REC104P33323 182 aa2.99□□□□□ -1.93
DNL4YOR005C ASH1P34233 588 aa2.99□□□□□ -1.93
DNL4YOR005C MNN4P36044 1178 aa2.99□□□□□ -1.93
DNL4YOR005C YBR238CP38330 731 aaKnown RBP2.99□□□□□ -1.93
DNL4YOR005C BIT2P38346 545 aa2.99□□□□□ -1.93
DNL4YOR005C ACA1P39970 489 aa2.99□□□□□ -1.93
DNL4YOR005C CCT5P40413 562 aaKnown RBP2.99□□□□□ -1.93
DNL4YOR005C SAP185P40856 1058 aa2.99□□□□□ -1.93
DNL4YOR005C NUP85P46673 744 aa2.99□□□□□ -1.93
DNL4YOR005C DAM1P53267 343 aa2.99□□□□□ -1.93
DNL4YOR005C YNR063WP53749 607 aa2.99□□□□□ -1.93
DNL4YOR005C YDR338CQ05497 695 aa2.99□□□□□ -1.93
DNL4YOR005C RPL11BQ3E757 174 aaPredicted RBP2.99□□□□□ -1.93
DNL4YOR005C TY3B-IQ7LHG5 1498 aaKnown RBP2.99□□□□□ -1.93
DNL4YOR005C YOL087CQ99247 1116 aa2.99□□□□□ -1.93
DNL4YOR005C TY1B-BRQ12193 1756 aa2.99□□□□□ -1.93
DNL4YOR005C TY1B-GR3Q12316 1755 aa2.99□□□□□ -1.93
DNL4YOR005C TY1B-ORQ92393 1755 aa2.99□□□□□ -1.93
DNL4YOR005C MSS18P08593 268 aa2.99□□□□□ -1.93
DNL4YOR005C HMG1P12683 1054 aa2.99□□□□□ -1.93
DNL4YOR005C YKL151CP36059 337 aa2.99□□□□□ -1.93
DNL4YOR005C DID4P36108 232 aa2.99□□□□□ -1.93
DNL4YOR005C SPO74P45819 413 aa2.99□□□□□ -1.93
DNL4YOR005C AIM14P53109 570 aa2.99□□□□□ -1.93
DNL4YOR005C LSC2P53312 427 aa2.99□□□□□ -1.93
DNL4YOR005C ECM9Q02202 377 aa2.99□□□□□ -1.93
DNL4YOR005C SRP1Q02821 542 aaKnown RBP2.99□□□□□ -1.93
DNL4YOR005C YPL260WQ08977 551 aa2.99□□□□□ -1.93
DNL4YOR005C IQG1Q12280 1495 aa2.98□□□□□ -1.93
DNL4YOR005C YAP1801P38856 637 aa2.98□□□□□ -1.93
DNL4YOR005C PRK1P40494 810 aa2.98□□□□□ -1.93
DNL4YOR005C NEO1P40527 1151 aa2.98□□□□□ -1.93
DNL4YOR005C TAF1P46677 1066 aa2.98□□□□□ -1.93
DNL4YOR005C VPS53P47061 822 aa2.98□□□□□ -1.93
DNL4YOR005C TCB2P48231 1178 aa2.98□□□□□ -1.93
DNL4YOR005C HST3P53687 447 aa2.98□□□□□ -1.93
DNL4YOR005C MET7Q08645 548 aa2.98□□□□□ -1.93
DNL4YOR005C GUP2Q08929 609 aa2.98□□□□□ -1.93
DNL4YOR005C ENV7Q12003 364 aa2.98□□□□□ -1.93
DNL4YOR005C ARO1P08566 1588 aaKnown RBP2.98□□□□□ -1.93
DNL4YOR005C GFD2P25370 566 aaKnown RBP2.98□□□□□ -1.93
DNL4YOR005C ATG14P38270 344 aa2.98□□□□□ -1.93
DNL4YOR005C YAR028WP39548 234 aa2.98□□□□□ -1.93
DNL4YOR005C EMP65P40085 556 aa2.98□□□□□ -1.93
DNL4YOR005C LEM3P42838 414 aa2.98□□□□□ -1.93
DNL4YOR005C GCV1P48015 400 aa2.98□□□□□ -1.93
DNL4YOR005C CCM1P48237 864 aaPredicted RBP2.98□□□□□ -1.93
DNL4YOR005C REH1Q06709 432 aa2.98□□□□□ -1.93
DNL4YOR005C CDC45Q08032 650 aa2.98□□□□□ -1.93
DNL4YOR005C SSP2Q08646 371 aa2.98□□□□□ -1.93
DNL4YOR005C TCB1Q12466 1186 aa2.98□□□□□ -1.93
DNL4YOR005C GDB1Q06625 1536 aa2.98□□□□□ -1.93
DNL4YOR005C MIH1P23748 554 aa2.97□□□□□ -1.93
DNL4YOR005C HSE1P38753 452 aa2.97□□□□□ -1.93
DNL4YOR005C MXR1P40029 184 aa2.97□□□□□ -1.93
DNL4YOR005C SKY1Q03656 742 aa2.97□□□□□ -1.93
DNL4YOR005C HRQ1Q05549 1077 aa2.97□□□□□ -1.93
DNL4YOR005C LAP2Q10740 671 aa2.97□□□□□ -1.93
DNL4YOR005C CFT1Q06632 1357 aaKnown RBP2.97□□□□□ -1.93
DNL4YOR005C COX11P19516 300 aaKnown RBP2.97□□□□□ -1.93
DNL4YOR005C CCR4P31384 837 aaKnown RBP2.97□□□□□ -1.93
DNL4YOR005C MCM10P32354 571 aa2.97□□□□□ -1.93
DNL4YOR005C SLA2P33338 968 aa2.97□□□□□ -1.93
DNL4YOR005C REI1P38344 393 aaPredicted RBP2.97□□□□□ -1.93
DNL4YOR005C QNS1P38795 714 aaKnown RBP2.97□□□□□ -1.93
DNL4YOR005C QRI7P43122 407 aa2.97□□□□□ -1.93
DNL4YOR005C RET2P43621 546 aa2.97□□□□□ -1.93
DNL4YOR005C SLD3P53135 668 aa2.97□□□□□ -1.93
DNL4YOR005C NPY1P53164 384 aa2.97□□□□□ -1.93
DNL4YOR005C PEX15Q08215 383 aa2.97□□□□□ -1.93
DNL4YOR005C TY1B-JR2P47100 1755 aaKnown RBP2.97□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 81.9 ms