RNA–Protein interactions for RNA: YMR223W

UBP8, Transcript of Ubiquitin-specific protease component of the SAGA acetylation complex, yeastyeast

Gene UBP8, Length 1,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP8YMR223W CTF13P35203 478 aa5.27□□□□□ -1.57
UBP8YMR223W CTF8P38877 133 aa5.27□□□□□ -1.57
UBP8YMR223W IRC10Q08118 586 aa5.27□□□□□ -1.57
UBP8YMR223W TRM11Q12463 433 aa5.27□□□□□ -1.57
UBP8YMR223W BUL2Q03758 920 aaKnown RBP5.26□□□□□ -1.57
UBP8YMR223W LCD1Q04377 747 aa5.26□□□□□ -1.57
UBP8YMR223W JIP5Q06214 492 aaPredicted RBP5.26□□□□□ -1.57
UBP8YMR223W PRI2P20457 528 aa5.25□□□□□ -1.57
UBP8YMR223W RFA1P22336 621 aaKnown RBP5.25□□□□□ -1.57
UBP8YMR223W TYE7P33122 291 aaPredicted RBP5.25□□□□□ -1.57
UBP8YMR223W YIL108WP40483 696 aaKnown RBP5.25□□□□□ -1.57
UBP8YMR223W SWM1Q12379 170 aa5.25□□□□□ -1.57
UBP8YMR223W MET3P08536 511 aa5.24□□□□□ -1.57
UBP8YMR223W SPF1P39986 1215 aaKnown RBP5.24□□□□□ -1.57
UBP8YMR223W YKR011CQ02209 353 aa5.24□□□□□ -1.57
UBP8YMR223W DLT1Q04216 342 aa5.23□□□□□ -1.57
UBP8YMR223W CDC11P32458 415 aa5.23□□□□□ -1.57
UBP8YMR223W HBS1P32769 611 aaKnown RBP5.23□□□□□ -1.57
UBP8YMR223W REC104P33323 182 aa5.23□□□□□ -1.57
UBP8YMR223W DAS1P47005 663 aa5.23□□□□□ -1.57
UBP8YMR223W TRM13Q12383 476 aa5.23□□□□□ -1.57
UBP8YMR223W TUB3P09734 445 aaKnown RBP5.22□□□□□ -1.57
UBP8YMR223W RPD3P32561 433 aa5.22□□□□□ -1.57
UBP8YMR223W TOK1P40310 691 aa5.22□□□□□ -1.57
UBP8YMR223W HDA1P53973 706 aa5.22□□□□□ -1.57
UBP8YMR223W YMR206WQ03695 313 aa5.22□□□□□ -1.57
UBP8YMR223W HBT1Q07653 1046 aaKnown RBP5.22□□□□□ -1.57
UBP8YMR223W FRE5Q08908 694 aa5.22□□□□□ -1.57
UBP8YMR223W URA1P28272 314 aaPredicted RBP5.21□□□□□ -1.58
UBP8YMR223W MTH1P35198 433 aa5.21□□□□□ -1.58
UBP8YMR223W ELO3P40319 345 aa5.21□□□□□ -1.58
UBP8YMR223W ATF1P40353 525 aa5.21□□□□□ -1.58
UBP8YMR223W JSN1P47135 1091 aaKnown RBP RIP-Chip data5.21□□□□□ -1.58not detected
UBP8YMR223W MUK1Q02866 612 aa5.21□□□□□ -1.58
UBP8YMR223W TDA5Q06417 326 aaKnown RBP5.21□□□□□ -1.58
UBP8YMR223W STE5P32917 917 aa5.2□□□□□ -1.58
UBP8YMR223W YHL017WP38745 532 aa5.2□□□□□ -1.58
UBP8YMR223W YHR078WP38799 552 aa5.2□□□□□ -1.58
UBP8YMR223W VAC8P39968 578 aa5.2□□□□□ -1.58
UBP8YMR223W CEP3P40969 608 aa5.2□□□□□ -1.58
UBP8YMR223W UTP8P53276 713 aaKnown RBP5.2□□□□□ -1.58
UBP8YMR223W CAF20P12962 161 aaKnown RBP5.19□□□□□ -1.58
UBP8YMR223W GND2P53319 492 aa5.19□□□□□ -1.58
UBP8YMR223W ADY4Q05955 493 aa5.19□□□□□ -1.58
UBP8YMR223W SPC42P36094 363 aa5.18□□□□□ -1.58
UBP8YMR223W YBR184WP38299 523 aa5.18□□□□□ -1.58
UBP8YMR223W SDS3P40505 327 aa5.18□□□□□ -1.58
UBP8YMR223W PFD1P46988 109 aa5.18□□□□□ -1.58
UBP8YMR223W ALD6P54115 500 aaKnown RBP5.18□□□□□ -1.58
UBP8YMR223W RPS9AO13516 197 aaKnown RBP5.17□□□□□ -1.58
UBP8YMR223W MPH2P0CD99 609 aa5.17□□□□□ -1.58
UBP8YMR223W CUE2P36075 443 aaKnown RBP5.17□□□□□ -1.58
UBP8YMR223W RPP1P38786 293 aa5.17□□□□□ -1.58
UBP8YMR223W SNU71P53207 620 aaKnown RBP5.17□□□□□ -1.58
UBP8YMR223W FMP25Q08023 583 aa5.17□□□□□ -1.58
UBP8YMR223W NGG1P32494 702 aa5.16□□□□□ -1.58
UBP8YMR223W PPS1P38148 807 aa5.16□□□□□ -1.58
UBP8YMR223W AMA1P50082 593 aa5.16□□□□□ -1.58
UBP8YMR223W ASI2P53895 289 aa5.16□□□□□ -1.58
UBP8YMR223W BDF2Q07442 638 aa5.16□□□□□ -1.58
UBP8YMR223W ERT1P38140 529 aa5.15□□□□□ -1.58
UBP8YMR223W ALR2P43553 858 aa5.15□□□□□ -1.58
UBP8YMR223W PUS2P53167 370 aa5.15□□□□□ -1.58
UBP8YMR223W NOG2P53742 486 aaKnown RBP5.15□□□□□ -1.58
UBP8YMR223W PET10P36139 283 aa5.14□□□□□ -1.59
UBP8YMR223W FKH2P41813 862 aa5.14□□□□□ -1.59
UBP8YMR223W MUP1P50276 574 aa5.14□□□□□ -1.59
UBP8YMR223W SPO75Q07798 868 aa5.14□□□□□ -1.59
UBP8YMR223W ENV7Q12003 364 aa5.14□□□□□ -1.59
UBP8YMR223W MSL5Q12186 476 aaKnown RBP RIP-Chip data5.14□□□□□ -1.59not detected
UBP8YMR223W YPR071WQ12346 211 aa5.14□□□□□ -1.59
UBP8YMR223W VHR1P40522 640 aa5.14□□□□□ -1.59
UBP8YMR223W NIT3P49954 291 aa5.14□□□□□ -1.59
UBP8YMR223W ERP6P53198 216 aa5.14□□□□□ -1.59
UBP8YMR223W PKH1Q03407 766 aa5.14□□□□□ -1.59
UBP8YMR223W NDJ1Q12366 352 aa5.14□□□□□ -1.59
UBP8YMR223W PRP4P20053 465 aaKnown RBP5.13□□□□□ -1.59
UBP8YMR223W DUS1P53759 423 aaKnown RBP5.13□□□□□ -1.59
UBP8YMR223W RPL8BP29453 256 aaKnown RBP5.12□□□□□ -1.59
UBP8YMR223W CYS3P31373 394 aaKnown RBP5.12□□□□□ -1.59
UBP8YMR223W YBR053CP38235 358 aa5.12□□□□□ -1.59
UBP8YMR223W PZF1P39933 429 aa5.12□□□□□ -1.59
UBP8YMR223W YJL163CP46996 555 aa5.12□□□□□ -1.59
UBP8YMR223W RIA1P53893 1110 aa5.12□□□□□ -1.59
UBP8YMR223W EAF1Q06337 982 aa5.12□□□□□ -1.59
UBP8YMR223W GRX1P25373 110 aaKnown RBP5.11□□□□□ -1.59
UBP8YMR223W YBR284WP38150 797 aa5.11□□□□□ -1.59
UBP8YMR223W MRPS35P53292 345 aa5.11□□□□□ -1.59
UBP8YMR223W NAN1Q02931 896 aaKnown RBP5.11□□□□□ -1.59
UBP8YMR223W WRS1Q12109 432 aaKnown RBP5.11□□□□□ -1.59
UBP8YMR223W MRH1Q12117 320 aaPredicted RBP5.11□□□□□ -1.59
UBP8YMR223W HBN1Q96VH4 193 aa5.11□□□□□ -1.59
UBP8YMR223W GFA1P14742 717 aaKnown RBP5.1□□□□□ -1.59
UBP8YMR223W MSD1P15179 658 aaKnown RBP5.1□□□□□ -1.59
UBP8YMR223W YIR042CP40586 236 aa5.1□□□□□ -1.59
UBP8YMR223W MUS81Q04149 632 aaPredicted RBP5.1□□□□□ -1.59
UBP8YMR223W CRR1Q05790 422 aa5.1□□□□□ -1.59
UBP8YMR223W HAL9Q12180 1030 aa5.1□□□□□ -1.59
UBP8YMR223W SSF2Q12153 453 aaPredicted RBP5.09□□□□□ -1.59
UBP8YMR223W YLR415CO13578 112 aa5.08□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 21 ms