RNA–Protein interactions for RNA: YMR176W

ECM5, Transcript of Subunit of the Snt2C complex, yeastyeast

Gene ECM5, Length 4,236 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM5YMR176W YDR514CQ04408 483 aa3.22□□□□□ -1.89
ECM5YMR176W YPR196WQ06595 470 aa3.22□□□□□ -1.89
ECM5YMR176W REH1Q06709 432 aa3.22□□□□□ -1.89
ECM5YMR176W YBR182C-AQ8TGU6 64 aa3.22□□□□□ -1.89
ECM5YMR176W SSD1P24276 1250 aaKnown RBP RIP-Chip data3.22□□□□□ -1.89not detected
ECM5YMR176W NOG2P53742 486 aaKnown RBP3.22□□□□□ -1.89
ECM5YMR176W YDL177CQ12257 170 aa3.22□□□□□ -1.89
ECM5YMR176W FBP1P09201 348 aa3.21□□□□□ -1.89
ECM5YMR176W DAL7P21826 554 aa3.21□□□□□ -1.89
ECM5YMR176W HOG1P32485 435 aa3.21□□□□□ -1.89
ECM5YMR176W SRP101P32916 621 aa3.21□□□□□ -1.89
ECM5YMR176W CTH1P47976 325 aa3.21□□□□□ -1.89
ECM5YMR176W RAI1P53063 387 aaKnown RBP3.21□□□□□ -1.89
ECM5YMR176W ENV11P53246 860 aa3.21□□□□□ -1.89
ECM5YMR176W KIN2P13186 1147 aaKnown RBP3.21□□□□□ -1.9
ECM5YMR176W COG8Q04632 607 aa3.21□□□□□ -1.9
ECM5YMR176W YDR338CQ05497 695 aa3.21□□□□□ -1.9
ECM5YMR176W ATG33Q06485 197 aa3.21□□□□□ -1.9
ECM5YMR176W MED7Q08278 222 aa3.21□□□□□ -1.9
ECM5YMR176W ENP1P38333 483 aaKnown RBP3.21□□□□□ -1.9
ECM5YMR176W YKR011CQ02209 353 aa3.21□□□□□ -1.9
ECM5YMR176W RSM24Q03976 319 aa3.21□□□□□ -1.9
ECM5YMR176W HMG1P12683 1054 aa3.2□□□□□ -1.9
ECM5YMR176W HSP78P33416 811 aa3.2□□□□□ -1.9
ECM5YMR176W TOS1P38288 455 aa3.2□□□□□ -1.9
ECM5YMR176W ATG36P46983 293 aa3.2□□□□□ -1.9
ECM5YMR176W YGR012WP53206 393 aa3.2□□□□□ -1.9
ECM5YMR176W GPP1P41277 250 aaKnown RBP3.2□□□□□ -1.9
ECM5YMR176W MTQ2Q03920 221 aaPredicted RBP3.2□□□□□ -1.9
ECM5YMR176W THI21Q08975 551 aa3.2□□□□□ -1.9
ECM5YMR176W NUP145P49687 1317 aa3.2□□□□□ -1.9
ECM5YMR176W RPD3P32561 433 aa3.2□□□□□ -1.9
ECM5YMR176W MND2P40577 368 aa3.2□□□□□ -1.9
ECM5YMR176W SSL1Q04673 461 aaPredicted RBP3.2□□□□□ -1.9
ECM5YMR176W CYC1P00044 109 aaPredicted RBP3.2□□□□□ -1.9
ECM5YMR176W HSF1P10961 833 aa3.2□□□□□ -1.9
ECM5YMR176W RFA1P22336 621 aaKnown RBP3.2□□□□□ -1.9
ECM5YMR176W RLP7P40693 322 aaKnown RBP3.2□□□□□ -1.9
ECM5YMR176W JSN1P47135 1091 aaKnown RBP RIP-Chip data3.2□□□□□ -1.9not detected
ECM5YMR176W VTS1Q08831 523 aaKnown RBP RIP-Chip data3.2□□□□□ -1.9not detected
ECM5YMR176W GLT1Q12680 2145 aaKnown RBP3.2□□□□□ -1.9
ECM5YMR176W GAL10P04397 699 aa3.19□□□□□ -1.9
ECM5YMR176W MRC1P25588 1096 aa3.19□□□□□ -1.9
ECM5YMR176W PUB1P32588 453 aaKnown RBP RIP-Chip data3.19□□□□□ -1.9not detected
ECM5YMR176W TYE7P33122 291 aaPredicted RBP3.19□□□□□ -1.9
ECM5YMR176W TYS1P36421 394 aaKnown RBP3.19□□□□□ -1.9
ECM5YMR176W YJR096WP47137 282 aa3.19□□□□□ -1.9
ECM5YMR176W AIM14P53109 570 aa3.19□□□□□ -1.9
ECM5YMR176W GUP2Q08929 609 aa3.19□□□□□ -1.9
ECM5YMR176W CMP2P14747 604 aa3.19□□□□□ -1.9
ECM5YMR176W PLB2Q03674 706 aa3.19□□□□□ -1.9
ECM5YMR176W BRE4Q07660 1125 aa3.19□□□□□ -1.9
ECM5YMR176W HAL9Q12180 1030 aa3.19□□□□□ -1.9
ECM5YMR176W XRN1P22147 1528 aaKnown RBP3.19□□□□□ -1.9
ECM5YMR176W CYS3P31373 394 aaKnown RBP3.19□□□□□ -1.9
ECM5YMR176W CCR4P31384 837 aaKnown RBP3.19□□□□□ -1.9
ECM5YMR176W ZRG8P40021 1076 aa3.19□□□□□ -1.9
ECM5YMR176W CEP3P40969 608 aa3.19□□□□□ -1.9
ECM5YMR176W ALY2P47029 1046 aa3.19□□□□□ -1.9
ECM5YMR176W ADY3Q07732 790 aa3.19□□□□□ -1.9
ECM5YMR176W TMA17Q12513 150 aa3.19□□□□□ -1.9
ECM5YMR176W CDC6P09119 513 aa3.18□□□□□ -1.9
ECM5YMR176W YJR120WP47157 116 aa3.18□□□□□ -1.9
ECM5YMR176W NHX1Q04121 633 aa3.18□□□□□ -1.9
ECM5YMR176W TY1B-DR3Q99231 1755 aa3.18□□□□□ -1.9
ECM5YMR176W SPE1P08432 466 aa3.18□□□□□ -1.9
ECM5YMR176W ETP1P38748 585 aaKnown RBP3.18□□□□□ -1.9
ECM5YMR176W INP52P50942 1183 aa3.18□□□□□ -1.9
ECM5YMR176W ALO1P54783 526 aaKnown RBP3.18□□□□□ -1.9
ECM5YMR176W TY1B-BRQ12193 1756 aa3.18□□□□□ -1.9
ECM5YMR176W TY1B-GR3Q12316 1755 aa3.18□□□□□ -1.9
ECM5YMR176W TY1B-ORQ92393 1755 aa3.18□□□□□ -1.9
ECM5YMR176W CKB2P38930 258 aa3.18□□□□□ -1.9
ECM5YMR176W URM1P40554 99 aaPredicted RBP3.18□□□□□ -1.9
ECM5YMR176W FOL1P53848 824 aa3.18□□□□□ -1.9
ECM5YMR176W GUD1Q07729 489 aa3.18□□□□□ -1.9
ECM5YMR176W YOR022CQ12204 715 aa3.18□□□□□ -1.9
ECM5YMR176W GIN4Q12263 1142 aa3.18□□□□□ -1.9
ECM5YMR176W SET5P38890 526 aaKnown RBP3.17□□□□□ -1.9
ECM5YMR176W LSB3P43603 459 aaKnown RBP3.17□□□□□ -1.9
ECM5YMR176W GPR1Q12361 961 aa3.17□□□□□ -1.9
ECM5YMR176W FAP7Q12055 197 aaPredicted RBP3.17□□□□□ -1.9
ECM5YMR176W STE14P32584 239 aa3.17□□□□□ -1.9
ECM5YMR176W CTF8P38877 133 aa3.17□□□□□ -1.9
ECM5YMR176W FOL2P51601 243 aaKnown RBP3.17□□□□□ -1.9
ECM5YMR176W DUS1P53759 423 aaKnown RBP3.17□□□□□ -1.9
ECM5YMR176W COG6P53959 839 aa3.17□□□□□ -1.9
ECM5YMR176W WHI4Q07655 649 aaKnown RBP3.17□□□□□ -1.9
ECM5YMR176W TPO1Q07824 586 aa3.17□□□□□ -1.9
ECM5YMR176W TY1B-HO13535 1793 aa3.17□□□□□ -1.9
ECM5YMR176W TY1B-DR5P0C2I2 1755 aa3.17□□□□□ -1.9
ECM5YMR176W TY1B-DR6P0C2I3 1755 aa3.17□□□□□ -1.9
ECM5YMR176W TY1B-LR2P0C2I5 1755 aa3.17□□□□□ -1.9
ECM5YMR176W TY1B-LR3P0C2I6 1755 aaKnown RBP3.17□□□□□ -1.9
ECM5YMR176W TY1B-PR1P0C2I9 1755 aaKnown RBP3.17□□□□□ -1.9
ECM5YMR176W TY1B-PR2P0C2J0 1756 aa3.17□□□□□ -1.9
ECM5YMR176W TY1B-PR3P0C2J1 1755 aaKnown RBP3.17□□□□□ -1.9
ECM5YMR176W TY1B-JR1P47098 1755 aa3.17□□□□□ -1.9
ECM5YMR176W TY1B-ML2Q03434 1755 aaKnown RBP3.17□□□□□ -1.9
ECM5YMR176W TY1B-ER1Q03612 1755 aa3.17□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 26.4 ms