RNA–Protein interactions for RNA: YMR176W

ECM5, Transcript of Subunit of the Snt2C complex, yeastyeast

Gene ECM5, Length 4,236 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM5YMR176W DRS1P32892 752 aaKnown RBP7.63□□□□□ -1.19
ECM5YMR176W MTC1P47018 478 aaKnown RBP7.48□□□□□ -1.21
ECM5YMR176W BFR2Q06631 534 aaKnown RBP6.66□□□□□ -1.34
ECM5YMR176W AVT3P36062 692 aa6.46□□□□□ -1.37
ECM5YMR176W DIP2Q12220 943 aaPredicted RBP6.45□□□□□ -1.38
ECM5YMR176W TFA1P36100 482 aa6.43□□□□□ -1.38
ECM5YMR176W RSE1Q04693 1361 aaKnown RBP6.03□□□□□ -1.44
ECM5YMR176W ISW2Q08773 1120 aa6□□□□□ -1.45
ECM5YMR176W RPG1P38249 964 aaKnown RBP5.93□□□□□ -1.46
ECM5YMR176W PRI1P10363 409 aa5.92□□□□□ -1.46
ECM5YMR176W FAP1P53971 965 aa5.87□□□□□ -1.47
ECM5YMR176W RPL17AP05740 184 aaKnown RBP5.8□□□□□ -1.48
ECM5YMR176W RPL17BP46990 184 aaKnown RBP5.8□□□□□ -1.48
ECM5YMR176W AAD16Q02895 342 aa5.76□□□□□ -1.49
ECM5YMR176W REB1P21538 810 aa5.68□□□□□ -1.5
ECM5YMR176W SPT21P35209 758 aa5.68□□□□□ -1.5
ECM5YMR176W RIM101P33400 625 aa5.61□□□□□ -1.51
ECM5YMR176W TSR3Q12094 313 aaKnown RBP5.6□□□□□ -1.51
ECM5YMR176W PRY3P47033 881 aa5.5□□□□□ -1.53
ECM5YMR176W RQC2Q12532 1038 aaKnown RBP5.5□□□□□ -1.53
ECM5YMR176W PTP3P40048 928 aa5.45□□□□□ -1.54
ECM5YMR176W OXP1P28273 1286 aa5.44□□□□□ -1.54
ECM5YMR176W YKR023WP36119 530 aaKnown RBP5.44□□□□□ -1.54
ECM5YMR176W SSP1P38871 571 aa5.4□□□□□ -1.55
ECM5YMR176W MRPL32P25348 183 aa5.35□□□□□ -1.55
ECM5YMR176W YCK3P39962 524 aa5.34□□□□□ -1.55
ECM5YMR176W DMA1P38823 416 aa5.32□□□□□ -1.56
ECM5YMR176W TFC8Q12308 588 aa5.32□□□□□ -1.56
ECM5YMR176W YLR271WQ06152 274 aa5.31□□□□□ -1.56
ECM5YMR176W YAH1Q12184 172 aaKnown RBP5.31□□□□□ -1.56
ECM5YMR176W HOP09932 586 aa5.29□□□□□ -1.56
ECM5YMR176W CDC27P38042 758 aa5.28□□□□□ -1.56
ECM5YMR176W YIL055CP40523 627 aaKnown RBP5.28□□□□□ -1.56
ECM5YMR176W ARP8Q12386 881 aaKnown RBP RIP-Chip data5.26□□□□□ -1.57not detected
ECM5YMR176W DCD1P06773 312 aa5.25□□□□□ -1.57
ECM5YMR176W RSM7P47150 247 aa5.24□□□□□ -1.57
ECM5YMR176W HAA1Q12753 694 aaKnown RBP5.22□□□□□ -1.57
ECM5YMR176W MGA2P40578 1113 aa5.19□□□□□ -1.58
ECM5YMR176W PSD2P53037 1138 aaKnown RBP5.17□□□□□ -1.58
ECM5YMR176W CST9Q06032 482 aa5.17□□□□□ -1.58
ECM5YMR176W BCH2P36122 765 aa5.16□□□□□ -1.58
ECM5YMR176W AI2P03876 854 aa5.15□□□□□ -1.59
ECM5YMR176W EPS1P40557 701 aa5.08□□□□□ -1.6
ECM5YMR176W BBC1P47068 1157 aa5.07□□□□□ -1.6
ECM5YMR176W SAS10Q12136 610 aaPredicted RBP5.05□□□□□ -1.6
ECM5YMR176W BDF1P35817 686 aa5.04□□□□□ -1.6
ECM5YMR176W UBP10P53874 792 aaPredicted RBP5.02□□□□□ -1.61
ECM5YMR176W SCY1P53009 804 aa5.02□□□□□ -1.61
ECM5YMR176W MAP2P38174 421 aaKnown RBP5.01□□□□□ -1.61
ECM5YMR176W RAM2P29703 316 aa5□□□□□ -1.61
ECM5YMR176W MRM1P25270 412 aa4.99□□□□□ -1.61
ECM5YMR176W RCR1P38212 213 aa4.98□□□□□ -1.61
ECM5YMR176W YGL015CP33199 130 aa4.95□□□□□ -1.62
ECM5YMR176W RTG3P38165 486 aa4.93□□□□□ -1.62
ECM5YMR176W LEU3P08638 886 aa4.92□□□□□ -1.62
ECM5YMR176W LEO1P38439 464 aa4.92□□□□□ -1.62
ECM5YMR176W SLX5P32828 619 aaKnown RBP4.9□□□□□ -1.62
ECM5YMR176W VPS29P38759 282 aa4.9□□□□□ -1.62
ECM5YMR176W MAK11P20484 414 aaKnown RBP4.89□□□□□ -1.63
ECM5YMR176W SET1P38827 1080 aaKnown RBP4.89□□□□□ -1.63
ECM5YMR176W YPR148CQ06523 435 aa4.89□□□□□ -1.63
ECM5YMR176W STS1P38637 319 aa4.83□□□□□ -1.64
ECM5YMR176W TAF7Q05021 590 aa4.82□□□□□ -1.64
ECM5YMR176W IFH1P39520 1085 aa4.82□□□□□ -1.64
ECM5YMR176W YMR1P47147 688 aaKnown RBP RIP-Chip data4.82□□□□□ -1.64not detected
ECM5YMR176W COQ8P27697 501 aa4.82□□□□□ -1.64
ECM5YMR176W NSR1P27476 414 aaKnown RBP RIP-Chip data4.81□□□□□ -1.64not detected
ECM5YMR176W VPS70P47161 811 aa4.81□□□□□ -1.64
ECM5YMR176W CKB1P43639 278 aa4.8□□□□□ -1.64
ECM5YMR176W EDS1P38073 919 aa4.79□□□□□ -1.64
ECM5YMR176W NOP53Q12080 455 aaKnown RBP4.79□□□□□ -1.64
ECM5YMR176W DBP1P24784 617 aaKnown RBP4.78□□□□□ -1.64
ECM5YMR176W YFR006WP43590 535 aa4.77□□□□□ -1.65
ECM5YMR176W YOR238WQ08634 303 aa4.77□□□□□ -1.65
ECM5YMR176W TGL3P40308 642 aa4.77□□□□□ -1.65
ECM5YMR176W TIF4632P39936 914 aaKnown RBP4.76□□□□□ -1.65
ECM5YMR176W DSF2P38213 736 aa4.75□□□□□ -1.65
ECM5YMR176W MIF2P35201 549 aa4.74□□□□□ -1.65
ECM5YMR176W RPN1P38764 993 aaKnown RBP4.73□□□□□ -1.65
ECM5YMR176W SPB4P25808 606 aaPredicted RBP4.73□□□□□ -1.65
ECM5YMR176W YAP5P40574 245 aa4.73□□□□□ -1.65
ECM5YMR176W PTC3P34221 468 aaKnown RBP4.72□□□□□ -1.65
ECM5YMR176W PBS2P08018 668 aa4.71□□□□□ -1.65
ECM5YMR176W VMA1P17255 1071 aaKnown RBP4.7□□□□□ -1.66
ECM5YMR176W PIB1Q06651 286 aa4.7□□□□□ -1.66
ECM5YMR176W REF2P42073 533 aaPredicted RBP4.69□□□□□ -1.66
ECM5YMR176W MST1P07236 462 aa4.68□□□□□ -1.66
ECM5YMR176W SAM3Q08986 587 aa4.66□□□□□ -1.66
ECM5YMR176W NUP42P49686 430 aaKnown RBP4.65□□□□□ -1.67
ECM5YMR176W YNR021WP53723 404 aaKnown RBP4.65□□□□□ -1.67
ECM5YMR176W MAM3Q12296 706 aa4.65□□□□□ -1.67
ECM5YMR176W IES2P40154 320 aa4.64□□□□□ -1.67
ECM5YMR176W MAK21Q12176 1025 aaKnown RBP4.64□□□□□ -1.67
ECM5YMR176W COX6P00427 148 aa4.63□□□□□ -1.67
ECM5YMR176W YDR090CQ03193 310 aa4.63□□□□□ -1.67
ECM5YMR176W GRE2Q12068 342 aaKnown RBP4.63□□□□□ -1.67
ECM5YMR176W GUT1P32190 709 aa4.62□□□□□ -1.67
ECM5YMR176W UBP14P38237 781 aaKnown RBP4.62□□□□□ -1.67
ECM5YMR176W DIT2P21595 489 aa4.61□□□□□ -1.67
ECM5YMR176W SOL3P38858 249 aa4.61□□□□□ -1.67
Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms