RNA–Protein interactions for RNA: YLR268W

SEC22, Transcript of R-SNARE protein, yeastyeast

Gene SEC22, Length 645 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC22YLR268W VPS30Q02948 557 aa4.04□□□□□ -1.76
SEC22YLR268W OYE2Q03558 400 aaKnown RBP4.04□□□□□ -1.76
SEC22YLR268W SSL1Q04673 461 aaPredicted RBP4.04□□□□□ -1.76
SEC22YLR268W HOF1Q05080 669 aa4.03□□□□□ -1.76
SEC22YLR268W SWM1Q12379 170 aa4.03□□□□□ -1.76
SEC22YLR268W BNR1P40450 1375 aa4.02□□□□□ -1.77
SEC22YLR268W CAF20P12962 161 aaKnown RBP4.02□□□□□ -1.77
SEC22YLR268W PEX2P32800 271 aa4.02□□□□□ -1.77
SEC22YLR268W FAA4P47912 694 aaKnown RBP4.02□□□□□ -1.77
SEC22YLR268W VPS16Q03308 798 aa4.02□□□□□ -1.77
SEC22YLR268W TUB1P09733 447 aaKnown RBP4.01□□□□□ -1.77
SEC22YLR268W NPP1P25353 742 aa4.01□□□□□ -1.77
SEC22YLR268W TDP1P38319 544 aa4.01□□□□□ -1.77
SEC22YLR268W AFT2Q08957 416 aa4.01□□□□□ -1.77
SEC22YLR268W YNL162W-AQ3E7A8 72 aa4.01□□□□□ -1.77
SEC22YLR268W HCA4P20448 770 aaKnown RBP4□□□□□ -1.77
SEC22YLR268W AFR1P33304 620 aa4□□□□□ -1.77
SEC22YLR268W PPZ2P33329 710 aa4□□□□□ -1.77
SEC22YLR268W TAH11P47112 604 aa4□□□□□ -1.77
SEC22YLR268W VPS73P53142 486 aaKnown RBP4□□□□□ -1.77
SEC22YLR268W PPH3P32345 308 aa3.99□□□□□ -1.77
SEC22YLR268W RIX1P38883 763 aaPredicted RBP3.99□□□□□ -1.77
SEC22YLR268W SIT1P39980 628 aa3.99□□□□□ -1.77
SEC22YLR268W YIL108WP40483 696 aaKnown RBP3.99□□□□□ -1.77
SEC22YLR268W MUP1P50276 574 aa3.99□□□□□ -1.77
SEC22YLR268W SHE9Q04172 456 aa3.99□□□□□ -1.77
SEC22YLR268W YDR306CQ06640 478 aa3.99□□□□□ -1.77
SEC22YLR268W ADE8P04161 214 aa3.98□□□□□ -1.77
SEC22YLR268W CDC43P18898 376 aa3.98□□□□□ -1.77
SEC22YLR268W RPD3P32561 433 aa3.98□□□□□ -1.77
SEC22YLR268W TYE7P33122 291 aaPredicted RBP3.98□□□□□ -1.77
SEC22YLR268W YBR053CP38235 358 aa3.98□□□□□ -1.77
SEC22YLR268W RPP1P38786 293 aa3.98□□□□□ -1.77
SEC22YLR268W RIA1P53893 1110 aa3.98□□□□□ -1.77
SEC22YLR268W GDE1Q02979 1223 aa3.98□□□□□ -1.77
SEC22YLR268W FAL1Q12099 399 aaKnown RBP3.98□□□□□ -1.77
SEC22YLR268W ICT1Q12385 394 aa3.98□□□□□ -1.77
SEC22YLR268W VBA5P36172 582 aa3.97□□□□□ -1.77
SEC22YLR268W YIL166CP40445 542 aa3.97□□□□□ -1.77
SEC22YLR268W FKH2P41813 862 aa3.97□□□□□ -1.77
SEC22YLR268W YJL163CP46996 555 aa3.97□□□□□ -1.77
SEC22YLR268W AMA1P50082 593 aa3.97□□□□□ -1.77
SEC22YLR268W MDM10P18409 493 aa3.96□□□□□ -1.78
SEC22YLR268W FLO10P36170 1169 aa3.96□□□□□ -1.78
SEC22YLR268W PCL5P38794 229 aa3.96□□□□□ -1.78
SEC22YLR268W YHR078WP38799 552 aa3.96□□□□□ -1.78
SEC22YLR268W CCM1P48237 864 aaPredicted RBP3.96□□□□□ -1.78
SEC22YLR268W MRPS35P53292 345 aa3.96□□□□□ -1.78
SEC22YLR268W HDA1P53973 706 aa3.96□□□□□ -1.78
SEC22YLR268W YKR011CQ02209 353 aa3.96□□□□□ -1.78
SEC22YLR268W YML020WQ03722 664 aa3.96□□□□□ -1.78
SEC22YLR268W ARO10Q06408 635 aa3.96□□□□□ -1.78
SEC22YLR268W PRP4P20053 465 aaKnown RBP3.95□□□□□ -1.78
SEC22YLR268W RFA1P22336 621 aaKnown RBP3.95□□□□□ -1.78
SEC22YLR268W TPO2P53283 614 aa3.95□□□□□ -1.78
SEC22YLR268W BUL2Q03758 920 aaKnown RBP3.95□□□□□ -1.78
SEC22YLR268W CRR1Q05790 422 aa3.95□□□□□ -1.78
SEC22YLR268W NOP8Q08287 484 aaPredicted RBP3.95□□□□□ -1.78
SEC22YLR268W KIN3P22209 435 aa3.94□□□□□ -1.78
SEC22YLR268W URA1P28272 314 aaPredicted RBP3.94□□□□□ -1.78
SEC22YLR268W AAR2P32357 355 aaPredicted RBP3.94□□□□□ -1.78
SEC22YLR268W TMT1P32643 299 aa3.94□□□□□ -1.78
SEC22YLR268W ASI2P53895 289 aa3.94□□□□□ -1.78
SEC22YLR268W YAP7Q08182 245 aa3.94□□□□□ -1.78
SEC22YLR268W MET6P05694 767 aaKnown RBP3.93□□□□□ -1.78
SEC22YLR268W CLN2P20438 545 aa3.93□□□□□ -1.78
SEC22YLR268W ADY2P25613 283 aa3.93□□□□□ -1.78
SEC22YLR268W MRP8P35719 219 aa3.93□□□□□ -1.78
SEC22YLR268W YRO2P38079 344 aa3.93□□□□□ -1.78
SEC22YLR268W SGO1Q08490 590 aa3.93□□□□□ -1.78
SEC22YLR268W DMC1P25453 334 aa3.92□□□□□ -1.78
SEC22YLR268W VHR1P40522 640 aa3.92□□□□□ -1.78
SEC22YLR268W CEP3P40969 608 aa3.92□□□□□ -1.78
SEC22YLR268W PKH1Q03407 766 aa3.92□□□□□ -1.78
SEC22YLR268W NAP1P25293 417 aaKnown RBP3.91□□□□□ -1.78
SEC22YLR268W NGG1P32494 702 aa3.91□□□□□ -1.78
SEC22YLR268W SCT1P32784 759 aa3.91□□□□□ -1.78
SEC22YLR268W PBY1P38254 753 aa3.91□□□□□ -1.78
SEC22YLR268W GGA2P38817 585 aaKnown RBP3.91□□□□□ -1.78
SEC22YLR268W YIR042CP40586 236 aa3.91□□□□□ -1.78
SEC22YLR268W JSN1P47135 1091 aaKnown RBP RIP-Chip data3.91□□□□□ -1.78not detected
SEC22YLR268W LAT1P12695 482 aaKnown RBP3.9□□□□□ -1.79
SEC22YLR268W TOK1P40310 691 aa3.9□□□□□ -1.79
SEC22YLR268W SSL2Q00578 843 aa3.9□□□□□ -1.79
SEC22YLR268W LCD1Q04377 747 aa3.9□□□□□ -1.79
SEC22YLR268W THI7Q05998 598 aa3.9□□□□□ -1.79
SEC22YLR268W OPI10Q08202 246 aa3.9□□□□□ -1.79
SEC22YLR268W IRC13Q08630 104 aa3.9□□□□□ -1.79
SEC22YLR268W PIN2Q12057 282 aa3.9□□□□□ -1.79
SEC22YLR268W RPS9AO13516 197 aaKnown RBP3.89□□□□□ -1.79
SEC22YLR268W FMP52P40008 231 aa3.89□□□□□ -1.79
SEC22YLR268W HSV2P50079 448 aaPredicted RBP3.89□□□□□ -1.79
SEC22YLR268W TEL2P53038 688 aa3.89□□□□□ -1.79
SEC22YLR268W DAM1P53267 343 aa3.89□□□□□ -1.79
SEC22YLR268W DUS1P53759 423 aaKnown RBP3.89□□□□□ -1.79
SEC22YLR268W MPH2P0CD99 609 aa3.88□□□□□ -1.79
SEC22YLR268W REC104P33323 182 aa3.88□□□□□ -1.79
SEC22YLR268W YKL069WP36088 180 aa3.88□□□□□ -1.79
SEC22YLR268W ERT1P38140 529 aa3.88□□□□□ -1.79
SEC22YLR268W GLO1P50107 326 aa3.88□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 25.9 ms