RNA–Protein interactions for RNA: YLR006C

SSK1, Transcript of Cytoplasmic phosphorelay intermediate osmosensor and regulator, yeastyeast

Gene SSK1, Length 2,139 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSK1YLR006C PMT7Q06644 662 aa6.23□□□□□ -1.41
SSK1YLR006C PSR2Q07949 397 aa6.23□□□□□ -1.41
SSK1YLR006C NBL1Q3E7Y6 73 aa6.23□□□□□ -1.41
SSK1YLR006C TRP2P00899 507 aaKnown RBP6.22□□□□□ -1.41
SSK1YLR006C CDC37P06101 506 aaKnown RBP6.22□□□□□ -1.41
SSK1YLR006C PHO13P19881 312 aa6.22□□□□□ -1.41
SSK1YLR006C SRO9P25567 434 aaKnown RBP6.22□□□□□ -1.41
SSK1YLR006C BMH2P34730 273 aaKnown RBP6.22□□□□□ -1.41
SSK1YLR006C YBR071WP38243 211 aa6.22□□□□□ -1.41
SSK1YLR006C SAP1P39955 897 aaKnown RBP6.22□□□□□ -1.41
SSK1YLR006C MDE1P47095 244 aa6.22□□□□□ -1.41
SSK1YLR006C CAF130P53280 1122 aaPredicted RBP6.22□□□□□ -1.41
SSK1YLR006C RAT1Q02792 1006 aaKnown RBP6.22□□□□□ -1.41
SSK1YLR006C BUL2Q03758 920 aaKnown RBP6.22□□□□□ -1.41
SSK1YLR006C EIS1Q05050 843 aaKnown RBP6.22□□□□□ -1.41
SSK1YLR006C VPS38Q05919 439 aa6.22□□□□□ -1.41
SSK1YLR006C TFC6Q06339 672 aa6.22□□□□□ -1.41
SSK1YLR006C RKM4Q12504 494 aa6.22□□□□□ -1.41
SSK1YLR006C SEC2P17065 759 aa6.22□□□□□ -1.41
SSK1YLR006C PLC1P32383 869 aa6.22□□□□□ -1.41
SSK1YLR006C MRS6P32864 603 aaKnown RBP6.22□□□□□ -1.41
SSK1YLR006C RPT1P33299 467 aaKnown RBP6.22□□□□□ -1.41
SSK1YLR006C BUD2P33314 1104 aa6.22□□□□□ -1.41
SSK1YLR006C RPC37P36121 282 aa6.22□□□□□ -1.41
SSK1YLR006C ETP1P38748 585 aaKnown RBP6.22□□□□□ -1.41
SSK1YLR006C QDR1P40475 563 aa6.22□□□□□ -1.41
SSK1YLR006C SHE10P53075 577 aa6.22□□□□□ -1.41
SSK1YLR006C CUE3P53137 624 aaKnown RBP6.22□□□□□ -1.41
SSK1YLR006C DSL1P53847 754 aa6.22□□□□□ -1.41
SSK1YLR006C MRD1Q06106 887 aaKnown RBP6.22□□□□□ -1.41
SSK1YLR006C APC2Q12440 853 aa6.22□□□□□ -1.41
SSK1YLR006C GAL2P13181 574 aa6.21□□□□□ -1.42
SSK1YLR006C MER1P16523 270 aa6.21□□□□□ -1.42
SSK1YLR006C EUG1P32474 517 aa6.21□□□□□ -1.42
SSK1YLR006C TRZ1P36159 838 aaPredicted RBP6.21□□□□□ -1.42
SSK1YLR006C BCD1P38772 366 aa6.21□□□□□ -1.42
SSK1YLR006C TGL3P40308 642 aa6.21□□□□□ -1.42
SSK1YLR006C GPD2P41911 440 aaKnown RBP6.21□□□□□ -1.42
SSK1YLR006C PTK2P47116 818 aaKnown RBP6.21□□□□□ -1.42
SSK1YLR006C HOP2P53187 214 aa6.21□□□□□ -1.42
SSK1YLR006C MRS2Q01926 470 aa6.21□□□□□ -1.42
SSK1YLR006C RNT1Q02555 471 aa6.21□□□□□ -1.42
SSK1YLR006C LAP2Q10740 671 aa6.21□□□□□ -1.42
SSK1YLR006C ATG9Q12142 997 aa6.21□□□□□ -1.42
SSK1YLR006C SCP160P06105 1222 aaKnown RBP RIP-Chip data6.2□□□□□ -1.42not detected
SSK1YLR006C YET1P35723 206 aa6.2□□□□□ -1.42
SSK1YLR006C YKL069WP36088 180 aa6.2□□□□□ -1.42
SSK1YLR006C RSP5P39940 809 aaKnown RBP6.2□□□□□ -1.42
SSK1YLR006C LAM5P43560 674 aa6.2□□□□□ -1.42
SSK1YLR006C LSC2P53312 427 aa6.2□□□□□ -1.42
SSK1YLR006C SPC19Q03954 165 aa6.2□□□□□ -1.42
SSK1YLR006C MMR1Q06324 491 aa6.2□□□□□ -1.42
SSK1YLR006C FLC1Q08967 793 aa6.2□□□□□ -1.42
SSK1YLR006C RPL22AP05749 121 aaKnown RBP6.2□□□□□ -1.42
SSK1YLR006C RPS6AP0CX37 236 aaKnown RBP6.2□□□□□ -1.42
SSK1YLR006C RPS6BP0CX38 236 aaPredicted RBP6.2□□□□□ -1.42
SSK1YLR006C IDI1P15496 288 aa6.2□□□□□ -1.42
SSK1YLR006C KAR3P17119 729 aa6.2□□□□□ -1.42
SSK1YLR006C MGM1P32266 881 aa6.2□□□□□ -1.42
SSK1YLR006C DBF20P32328 564 aa6.2□□□□□ -1.42
SSK1YLR006C PRP40P33203 583 aaKnown RBP6.2□□□□□ -1.42
SSK1YLR006C KDX1P36005 433 aa6.2□□□□□ -1.42
SSK1YLR006C DHR2P36009 735 aaPredicted RBP6.2□□□□□ -1.42
SSK1YLR006C RIX1P38883 763 aaPredicted RBP6.2□□□□□ -1.42
SSK1YLR006C TMA108P40462 946 aa6.2□□□□□ -1.42
SSK1YLR006C NCS2P53923 493 aaPredicted RBP6.2□□□□□ -1.42
SSK1YLR006C RPS15Q01855 142 aaKnown RBP6.2□□□□□ -1.42
SSK1YLR006C FDC1Q03034 503 aa6.2□□□□□ -1.42
SSK1YLR006C ARP9Q05123 467 aa6.2□□□□□ -1.42
SSK1YLR006C PNP1Q05788 311 aa6.2□□□□□ -1.42
SSK1YLR006C TOS4Q06266 489 aa6.2□□□□□ -1.42
SSK1YLR006C GRE2Q12068 342 aaKnown RBP6.2□□□□□ -1.42
SSK1YLR006C RRP6Q12149 733 aaKnown RBP6.2□□□□□ -1.42
SSK1YLR006C YMR084WA2P2R3 262 aa6.19□□□□□ -1.42
SSK1YLR006C CLN1P20437 546 aa6.19□□□□□ -1.42
SSK1YLR006C CDC60P26637 1090 aaKnown RBP6.19□□□□□ -1.42
SSK1YLR006C SMY1P32364 656 aaKnown RBP6.19□□□□□ -1.42
SSK1YLR006C RIB7P33312 244 aa6.19□□□□□ -1.42
SSK1YLR006C YBL028CP38202 106 aa6.19□□□□□ -1.42
SSK1YLR006C CCT4P39078 528 aaKnown RBP6.19□□□□□ -1.42
SSK1YLR006C RPS26AP39938 119 aaKnown RBP6.19□□□□□ -1.42
SSK1YLR006C RPS26BP39939 119 aaKnown RBP6.19□□□□□ -1.42
SSK1YLR006C ATG3P40344 310 aa6.19□□□□□ -1.42
SSK1YLR006C YIL166CP40445 542 aa6.19□□□□□ -1.42
SSK1YLR006C KTR7P40504 517 aa6.19□□□□□ -1.42
SSK1YLR006C MVP1P40959 511 aaKnown RBP6.19□□□□□ -1.42
SSK1YLR006C FYV8P46949 817 aaKnown RBP6.19□□□□□ -1.42
SSK1YLR006C YGL140CP53120 1219 aa6.19□□□□□ -1.42
SSK1YLR006C HAS1Q03532 505 aaKnown RBP6.19□□□□□ -1.42
SSK1YLR006C GYL1Q04322 720 aa6.19□□□□□ -1.42
SSK1YLR006C ATG23Q06671 453 aa6.19□□□□□ -1.42
SSK1YLR006C PTC5Q12511 572 aa6.19□□□□□ -1.42
SSK1YLR006C YOR111WQ99210 232 aa6.19□□□□□ -1.42
SSK1YLR006C HIS4P00815 799 aaKnown RBP6.19□□□□□ -1.42
SSK1YLR006C ILS1P09436 1072 aaKnown RBP6.19□□□□□ -1.42
SSK1YLR006C STE11P23561 717 aa6.19□□□□□ -1.42
SSK1YLR006C BMH1P29311 267 aaKnown RBP6.19□□□□□ -1.42
SSK1YLR006C SHM1P37292 490 aaPredicted RBP6.19□□□□□ -1.42
SSK1YLR006C SPF1P39986 1215 aaKnown RBP6.19□□□□□ -1.42
SSK1YLR006C CSM2P40465 213 aa6.19□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 25.9 ms