RNA–Protein interactions for RNA: YLL011W

SOF1, Transcript of Protein required for biogenesis of 40S (small) ribosomal subunit, yeastyeast

Gene SOF1, Length 1,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOF1YLL011W SOG2Q08817 791 aa5.07□□□□□ -1.6
SOF1YLL011W YPR027CQ12079 277 aa5.07□□□□□ -1.6
SOF1YLL011W RPL11BQ3E757 174 aaPredicted RBP5.07□□□□□ -1.6
SOF1YLL011W MRP10O75012 95 aa5.06□□□□□ -1.6
SOF1YLL011W CDC4P07834 779 aa5.06□□□□□ -1.6
SOF1YLL011W YKU70P32807 602 aa5.06□□□□□ -1.6
SOF1YLL011W SER1P33330 395 aaKnown RBP5.06□□□□□ -1.6
SOF1YLL011W EMC3P36039 253 aa5.06□□□□□ -1.6
SOF1YLL011W MXR1P40029 184 aa5.06□□□□□ -1.6
SOF1YLL011W DOT6P40059 670 aaKnown RBP5.06□□□□□ -1.6
SOF1YLL011W CCT5P40413 562 aaKnown RBP5.06□□□□□ -1.6
SOF1YLL011W RET2P43621 546 aa5.06□□□□□ -1.6
SOF1YLL011W UBP15P50101 1230 aa5.06□□□□□ -1.6
SOF1YLL011W TAD1P53065 400 aa5.06□□□□□ -1.6
SOF1YLL011W SKY1Q03656 742 aa5.06□□□□□ -1.6
SOF1YLL011W TRS130Q03660 1102 aa5.06□□□□□ -1.6
SOF1YLL011W YMR018WQ04364 514 aa5.06□□□□□ -1.6
SOF1YLL011W PEX15Q08215 383 aa5.06□□□□□ -1.6
SOF1YLL011W ENV7Q12003 364 aa5.06□□□□□ -1.6
SOF1YLL011W MED1Q12321 566 aa5.06□□□□□ -1.6
SOF1YLL011W YOL114CQ12322 202 aa5.06□□□□□ -1.6
SOF1YLL011W RPS21AP0C0V8 87 aaKnown RBP5.05□□□□□ -1.6
SOF1YLL011W SEC18P18759 758 aaKnown RBP5.05□□□□□ -1.6
SOF1YLL011W NFS1P25374 497 aa5.05□□□□□ -1.6
SOF1YLL011W MEP3P53390 489 aa5.05□□□□□ -1.6
SOF1YLL011W NHX1Q04121 633 aa5.05□□□□□ -1.6
SOF1YLL011W YDR514CQ04408 483 aa5.05□□□□□ -1.6
SOF1YLL011W HIM1Q06674 414 aa5.05□□□□□ -1.6
SOF1YLL011W MMS1Q06211 1407 aa5.04□□□□□ -1.6
SOF1YLL011W TY1B-BRQ12193 1756 aa5.04□□□□□ -1.6
SOF1YLL011W TY1B-GR3Q12316 1755 aa5.04□□□□□ -1.6
SOF1YLL011W TY1B-ORQ92393 1755 aa5.04□□□□□ -1.6
SOF1YLL011W HCA4P20448 770 aaKnown RBP5.04□□□□□ -1.6
SOF1YLL011W MSM1P22438 575 aa5.04□□□□□ -1.6
SOF1YLL011W SWI3P32591 825 aa5.04□□□□□ -1.6
SOF1YLL011W ARL1P38116 183 aaKnown RBP5.04□□□□□ -1.6
SOF1YLL011W YAR028WP39548 234 aa5.04□□□□□ -1.6
SOF1YLL011W YJR098CP47139 656 aa5.04□□□□□ -1.6
SOF1YLL011W CCM1P48237 864 aaPredicted RBP5.04□□□□□ -1.6
SOF1YLL011W UBC9P50623 157 aaPredicted RBP5.04□□□□□ -1.6
SOF1YLL011W YHM2Q04013 314 aa5.04□□□□□ -1.6
SOF1YLL011W OPY2Q06810 360 aa5.04□□□□□ -1.6
SOF1YLL011W TY2B-LR1P0C2J3 1770 aa5.04□□□□□ -1.6
SOF1YLL011W TY2B-FP0CX63 1770 aa5.04□□□□□ -1.6
SOF1YLL011W TY2B-GR2P0CX64 1770 aa5.04□□□□□ -1.6
SOF1YLL011W TY2B-CP25384 1770 aa5.04□□□□□ -1.6
SOF1YLL011W TY2B-DR2Q03494 1770 aa5.04□□□□□ -1.6
SOF1YLL011W TY1B-DR1Q03855 1755 aa5.04□□□□□ -1.6
SOF1YLL011W TY2B-DR3Q07791 1770 aaKnown RBP5.04□□□□□ -1.6
SOF1YLL011W TY2B-OR1Q12113 1770 aa5.04□□□□□ -1.6
SOF1YLL011W TY2B-DR1Q12472 1770 aa5.04□□□□□ -1.6
SOF1YLL011W TY2B-OR2Q12501 1770 aa5.04□□□□□ -1.6
SOF1YLL011W TOP2P06786 1428 aaKnown RBP5.03□□□□□ -1.6
SOF1YLL011W CCR4P31384 837 aaKnown RBP5.03□□□□□ -1.6
SOF1YLL011W IMP2'P32351 346 aa5.03□□□□□ -1.6
SOF1YLL011W RPS0AP32905 252 aaKnown RBP5.03□□□□□ -1.6
SOF1YLL011W REI1P38344 393 aaPredicted RBP5.03□□□□□ -1.6
SOF1YLL011W HXT6P39003 570 aaKnown RBP5.03□□□□□ -1.6
SOF1YLL011W HXT7P39004 570 aa5.03□□□□□ -1.6
SOF1YLL011W NIT3P49954 291 aa5.03□□□□□ -1.6
SOF1YLL011W CEG1Q01159 459 aaPredicted RBP5.03□□□□□ -1.6
SOF1YLL011W MEC3Q02574 474 aa5.03□□□□□ -1.6
SOF1YLL011W HRQ1Q05549 1077 aa5.03□□□□□ -1.6
SOF1YLL011W CIA1Q05583 330 aa5.03□□□□□ -1.6
SOF1YLL011W VIP1Q06685 1146 aaKnown RBP5.03□□□□□ -1.6
SOF1YLL011W LAP2Q10740 671 aa5.03□□□□□ -1.6
SOF1YLL011W CLF1Q12309 687 aaPredicted RBP5.03□□□□□ -1.6
SOF1YLL011W SPO21Q12411 609 aa5.03□□□□□ -1.6
SOF1YLL011W TRM732Q03496 1420 aa5.03□□□□□ -1.6
SOF1YLL011W RPP1AP05318 106 aaPredicted RBP5.02□□□□□ -1.61
SOF1YLL011W MIH1P23748 554 aa5.02□□□□□ -1.61
SOF1YLL011W PRO1P32264 428 aa5.02□□□□□ -1.61
SOF1YLL011W RPN10P38886 268 aaKnown RBP5.02□□□□□ -1.61
SOF1YLL011W VTC2P43585 828 aa5.02□□□□□ -1.61
SOF1YLL011W VPS53P47061 822 aa5.02□□□□□ -1.61
SOF1YLL011W HST3P53687 447 aa5.02□□□□□ -1.61
SOF1YLL011W CNM67P53865 581 aaKnown RBP5.02□□□□□ -1.61
SOF1YLL011W MOT3P54785 490 aaKnown RBP5.02□□□□□ -1.61
SOF1YLL011W SPC19Q03954 165 aa5.02□□□□□ -1.61
SOF1YLL011W GRC3Q07845 632 aa5.02□□□□□ -1.61
SOF1YLL011W YPL260WQ08977 551 aa5.02□□□□□ -1.61
SOF1YLL011W ALG6Q12001 544 aaKnown RBP5.02□□□□□ -1.61
SOF1YLL011W RPS21BQ3E754 87 aaKnown RBP5.02□□□□□ -1.61
SOF1YLL011W MMS22Q06164 1454 aa5.02□□□□□ -1.61
SOF1YLL011W SSM4P40318 1319 aa5.02□□□□□ -1.61
SOF1YLL011W BI4P03879 638 aa5.01□□□□□ -1.61
SOF1YLL011W ASH1P34233 588 aa5.01□□□□□ -1.61
SOF1YLL011W YKL151CP36059 337 aa5.01□□□□□ -1.61
SOF1YLL011W PSY4P38193 441 aa5.01□□□□□ -1.61
SOF1YLL011W VPS8P39702 1274 aa5.01□□□□□ -1.61
SOF1YLL011W GPB2P39717 880 aa5.01□□□□□ -1.61
SOF1YLL011W ALY2P47029 1046 aa5.01□□□□□ -1.61
SOF1YLL011W RSC1P53236 928 aa5.01□□□□□ -1.61
SOF1YLL011W PTA1Q01329 785 aaPredicted RBP5.01□□□□□ -1.61
SOF1YLL011W BLS1Q06071 122 aa5.01□□□□□ -1.61
SOF1YLL011W DRS2P39524 1355 aa5.01□□□□□ -1.61
SOF1YLL011W TY4B-PA0A0B7P3V8 1104 aa5□□□□□ -1.61
SOF1YLL011W RER1P25560 188 aa5□□□□□ -1.61
SOF1YLL011W KIP1P28742 1111 aa5□□□□□ -1.61
SOF1YLL011W PGM2P37012 569 aaKnown RBP5□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 163.8 ms