RNA–Protein interactions for RNA: YGR003W

CUL3, Transcript of Ubiquitin-protein ligase, yeastyeast

Gene CUL3, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUL3YGR003W FUN30P31380 1131 aa2.32□□□□□ -2.04
CUL3YGR003W STE14P32584 239 aa2.32□□□□□ -2.04
CUL3YGR003W STE5P32917 917 aa2.32□□□□□ -2.04
CUL3YGR003W MBP1P39678 833 aa2.32□□□□□ -2.04
CUL3YGR003W YGL176CP46945 554 aa2.32□□□□□ -2.04
CUL3YGR003W SNU71P53207 620 aaKnown RBP2.32□□□□□ -2.04
CUL3YGR003W ADY4Q05955 493 aa2.32□□□□□ -2.04
CUL3YGR003W TMA46Q12000 345 aaKnown RBP2.32□□□□□ -2.04
CUL3YGR003W ELO3P40319 345 aa2.31□□□□□ -2.04
CUL3YGR003W PUS2P53167 370 aa2.31□□□□□ -2.04
CUL3YGR003W PEX19Q07418 342 aa2.31□□□□□ -2.04
CUL3YGR003W RAD27P26793 382 aa2.3□□□□□ -2.04
CUL3YGR003W PCL5P38794 229 aa2.3□□□□□ -2.04
CUL3YGR003W NPP2P39997 493 aa2.3□□□□□ -2.04
CUL3YGR003W MAD1P40957 749 aa2.3□□□□□ -2.04
CUL3YGR003W OPI10Q08202 246 aa2.3□□□□□ -2.04
CUL3YGR003W ORC2P32833 620 aa2.3□□□□□ -2.04
CUL3YGR003W GIC1P38785 314 aa2.3□□□□□ -2.04
CUL3YGR003W HRQ1Q05549 1077 aa2.3□□□□□ -2.04
CUL3YGR003W MRI1Q06489 411 aaKnown RBP2.3□□□□□ -2.04
CUL3YGR003W FAL1Q12099 399 aaKnown RBP2.3□□□□□ -2.04
CUL3YGR003W VBA5P36172 582 aa2.29□□□□□ -2.04
CUL3YGR003W CWC24P53769 259 aa2.29□□□□□ -2.04
CUL3YGR003W SSF2Q12153 453 aaPredicted RBP2.29□□□□□ -2.04
CUL3YGR003W CAF20P12962 161 aaKnown RBP2.29□□□□□ -2.04
CUL3YGR003W ERT1P38140 529 aa2.29□□□□□ -2.04
CUL3YGR003W SVF1Q05515 481 aa2.29□□□□□ -2.04
CUL3YGR003W YKL107WP34251 309 aa2.28□□□□□ -2.04
CUL3YGR003W CTF13P35203 478 aa2.28□□□□□ -2.04
CUL3YGR003W SPF1P39986 1215 aaKnown RBP2.28□□□□□ -2.04
CUL3YGR003W BPL1P48445 690 aaPredicted RBP2.28□□□□□ -2.04
CUL3YGR003W APM1Q00776 475 aaPredicted RBP2.28□□□□□ -2.04
CUL3YGR003W RKM4Q12504 494 aa2.28□□□□□ -2.04
CUL3YGR003W SPO11P23179 398 aa2.27□□□□□ -2.05
CUL3YGR003W AGP1P25376 633 aa2.27□□□□□ -2.05
CUL3YGR003W AFR1P33304 620 aa2.27□□□□□ -2.05
CUL3YGR003W PFD1P46988 109 aa2.27□□□□□ -2.05
CUL3YGR003W CLN2P20438 545 aa2.27□□□□□ -2.05
CUL3YGR003W DMC1P25453 334 aa2.27□□□□□ -2.05
CUL3YGR003W RPC82P32349 654 aa2.27□□□□□ -2.05
CUL3YGR003W MRPS35P53292 345 aa2.27□□□□□ -2.05
CUL3YGR003W CRR1Q05790 422 aa2.27□□□□□ -2.05
CUL3YGR003W GRX1P25373 110 aaKnown RBP2.26□□□□□ -2.05
CUL3YGR003W SEC21P32074 935 aaKnown RBP2.26□□□□□ -2.05
CUL3YGR003W YBR184WP38299 523 aa2.26□□□□□ -2.05
CUL3YGR003W RIA1P53893 1110 aa2.26□□□□□ -2.05
CUL3YGR003W SPO20Q04359 397 aa2.26□□□□□ -2.05
CUL3YGR003W TRM11Q12463 433 aa2.26□□□□□ -2.05
CUL3YGR003W NPP1P25353 742 aa2.26□□□□□ -2.05
CUL3YGR003W SBA1P28707 216 aaKnown RBP2.26□□□□□ -2.05
CUL3YGR003W SFB2P53953 876 aa2.26□□□□□ -2.05
CUL3YGR003W RIM13Q03792 727 aa2.26□□□□□ -2.05
CUL3YGR003W TDA5Q06417 326 aaKnown RBP2.26□□□□□ -2.05
CUL3YGR003W RGT2Q12300 763 aa2.26□□□□□ -2.05
CUL3YGR003W HBS1P32769 611 aaKnown RBP2.25□□□□□ -2.05
CUL3YGR003W RAI1P53063 387 aaKnown RBP2.25□□□□□ -2.05
CUL3YGR003W PTP1P25044 335 aa2.25□□□□□ -2.05
CUL3YGR003W CDC12P32468 407 aaKnown RBP2.25□□□□□ -2.05
CUL3YGR003W PIN4P34217 668 aaKnown RBP RIP-Chip data2.25□□□□□ -2.05not detected
CUL3YGR003W SAH1P39954 449 aaKnown RBP2.25□□□□□ -2.05
CUL3YGR003W MUP1P50276 574 aa2.25□□□□□ -2.05
CUL3YGR003W DAM1P53267 343 aa2.25□□□□□ -2.05
CUL3YGR003W MPS1P54199 764 aa2.25□□□□□ -2.05
CUL3YGR003W BUL2Q03758 920 aaKnown RBP2.25□□□□□ -2.05
CUL3YGR003W SHE9Q04172 456 aa2.25□□□□□ -2.05
CUL3YGR003W SEG1Q04279 960 aa2.25□□□□□ -2.05
CUL3YGR003W TDA9Q04545 1251 aa2.25□□□□□ -2.05
CUL3YGR003W GUS1P46655 708 aaKnown RBP RIP-Chip data2.24□□□□□ -2.05not detected
CUL3YGR003W YJL163CP46996 555 aa2.24□□□□□ -2.05
CUL3YGR003W UBX5Q06682 500 aa2.24□□□□□ -2.05
CUL3YGR003W YHR020WP38708 688 aaKnown RBP2.23□□□□□ -2.05
CUL3YGR003W FKH2P41813 862 aa2.23□□□□□ -2.05
CUL3YGR003W DUS3Q06053 668 aaKnown RBP2.23□□□□□ -2.05
CUL3YGR003W YPR196WQ06595 470 aa2.23□□□□□ -2.05
CUL3YGR003W FMP25Q08023 583 aa2.23□□□□□ -2.05
CUL3YGR003W SWM1Q12379 170 aa2.23□□□□□ -2.05
CUL3YGR003W TOP3P13099 656 aa2.23□□□□□ -2.05
CUL3YGR003W HOM2P13663 365 aaKnown RBP2.23□□□□□ -2.05
CUL3YGR003W BNA3P47039 444 aaKnown RBP2.23□□□□□ -2.05
CUL3YGR003W YDR306CQ06640 478 aa2.23□□□□□ -2.05
CUL3YGR003W RAD4P14736 754 aa2.22□□□□□ -2.05
CUL3YGR003W RPL8BP29453 256 aaKnown RBP2.22□□□□□ -2.05
CUL3YGR003W MRP8P35719 219 aa2.22□□□□□ -2.05
CUL3YGR003W YBR284WP38150 797 aa2.22□□□□□ -2.05
CUL3YGR003W TSL1P38427 1098 aaKnown RBP2.22□□□□□ -2.05
CUL3YGR003W CBR1P38626 284 aaKnown RBP2.22□□□□□ -2.05
CUL3YGR003W IRR1P40541 1150 aa2.22□□□□□ -2.05
CUL3YGR003W WRS1Q12109 432 aaKnown RBP2.22□□□□□ -2.05
CUL3YGR003W RPN13O13563 156 aa2.21□□□□□ -2.06
CUL3YGR003W NAP1P25293 417 aaKnown RBP2.21□□□□□ -2.06
CUL3YGR003W PBY1P38254 753 aa2.21□□□□□ -2.06
CUL3YGR003W RPP1P38786 293 aa2.21□□□□□ -2.06
CUL3YGR003W MEP2P41948 499 aa2.21□□□□□ -2.06
CUL3YGR003W ALR2P43553 858 aa2.21□□□□□ -2.06
CUL3YGR003W NET1P47035 1189 aa2.21□□□□□ -2.06
CUL3YGR003W HUL5P53119 910 aa2.21□□□□□ -2.06
CUL3YGR003W NOP7P53261 605 aaKnown RBP2.21□□□□□ -2.06
CUL3YGR003W SSL1Q04673 461 aaPredicted RBP2.21□□□□□ -2.06
CUL3YGR003W TUB3P09734 445 aaKnown RBP2.21□□□□□ -2.06
CUL3YGR003W NOP1P15646 327 aaKnown RBP2.21□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 30.6 ms