RNA–Protein interactions for RNA: YDR469W

SDC1, Transcript of Subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SDC1, Length 528 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDC1YDR469W TSL1P38427 1098 aaKnown RBP3.71□□□□□ -1.82
SDC1YDR469W ARO10Q06408 635 aa3.71□□□□□ -1.82
SDC1YDR469W TRM11Q12463 433 aa3.71□□□□□ -1.82
SDC1YDR469W CDC43P18898 376 aa3.7□□□□□ -1.82
SDC1YDR469W KIN3P22209 435 aa3.7□□□□□ -1.82
SDC1YDR469W STE13P33894 931 aa3.7□□□□□ -1.82
SDC1YDR469W SDP1P40479 209 aa3.7□□□□□ -1.82
SDC1YDR469W GLO1P50107 326 aa3.7□□□□□ -1.82
SDC1YDR469W MUP1P50276 574 aa3.7□□□□□ -1.82
SDC1YDR469W MRPS35P53292 345 aa3.7□□□□□ -1.82
SDC1YDR469W SWM1Q12379 170 aa3.7□□□□□ -1.82
SDC1YDR469W FBP1P09201 348 aa3.69□□□□□ -1.82
SDC1YDR469W CDC48P25694 835 aaKnown RBP3.69□□□□□ -1.82
SDC1YDR469W PET112P33893 541 aa3.69□□□□□ -1.82
SDC1YDR469W MET10P39692 1035 aa3.69□□□□□ -1.82
SDC1YDR469W SNF7P39929 240 aaKnown RBP3.69□□□□□ -1.82
SDC1YDR469W CRR1Q05790 422 aa3.69□□□□□ -1.82
SDC1YDR469W RPP1P38786 293 aa3.68□□□□□ -1.82
SDC1YDR469W YIL108WP40483 696 aaKnown RBP3.68□□□□□ -1.82
SDC1YDR469W SEC5P89102 971 aa3.68□□□□□ -1.82
SDC1YDR469W NPP1P25353 742 aa3.67□□□□□ -1.82
SDC1YDR469W ILV6P25605 309 aaKnown RBP3.67□□□□□ -1.82
SDC1YDR469W ADY2P25613 283 aa3.67□□□□□ -1.82
SDC1YDR469W YKR078WP36158 585 aaKnown RBP3.67□□□□□ -1.82
SDC1YDR469W YIL166CP40445 542 aa3.67□□□□□ -1.82
SDC1YDR469W YJL163CP46996 555 aa3.67□□□□□ -1.82
SDC1YDR469W YGR053CP53234 283 aa3.67□□□□□ -1.82
SDC1YDR469W RRP15Q06511 250 aaPredicted RBP3.67□□□□□ -1.82
SDC1YDR469W PRP4P20053 465 aaKnown RBP3.66□□□□□ -1.82
SDC1YDR469W YBR053CP38235 358 aa3.66□□□□□ -1.82
SDC1YDR469W CTF8P38877 133 aa3.66□□□□□ -1.82
SDC1YDR469W YKE2P52553 114 aa3.66□□□□□ -1.82
SDC1YDR469W RMD1Q03441 430 aa3.66□□□□□ -1.82
SDC1YDR469W VPS30Q02948 557 aa3.65□□□□□ -1.83
SDC1YDR469W RIA1P53893 1110 aa3.64□□□□□ -1.83
SDC1YDR469W PPH3P32345 308 aa3.63□□□□□ -1.83
SDC1YDR469W YBR238CP38330 731 aaKnown RBP3.63□□□□□ -1.83
SDC1YDR469W GUS1P46655 708 aaKnown RBP RIP-Chip data3.63□□□□□ -1.83not detected
SDC1YDR469W YDR306CQ06640 478 aa3.63□□□□□ -1.83
SDC1YDR469W IRC13Q08630 104 aa3.63□□□□□ -1.83
SDC1YDR469W AFR1P33304 620 aa3.62□□□□□ -1.83
SDC1YDR469W CBR1P38626 284 aaKnown RBP3.62□□□□□ -1.83
SDC1YDR469W CEP3P40969 608 aa3.62□□□□□ -1.83
SDC1YDR469W FAA4P47912 694 aaKnown RBP3.62□□□□□ -1.83
SDC1YDR469W RFA1P22336 621 aaKnown RBP3.61□□□□□ -1.83
SDC1YDR469W TYE7P33122 291 aaPredicted RBP3.61□□□□□ -1.83
SDC1YDR469W YHR078WP38799 552 aa3.61□□□□□ -1.83
SDC1YDR469W VHR1P40522 640 aa3.61□□□□□ -1.83
SDC1YDR469W OYE2Q03558 400 aaKnown RBP3.61□□□□□ -1.83
SDC1YDR469W GGA2P38817 585 aaKnown RBP3.6□□□□□ -1.83
SDC1YDR469W AMA1P50082 593 aa3.6□□□□□ -1.83
SDC1YDR469W SCS3P53012 380 aa3.6□□□□□ -1.83
SDC1YDR469W YKR011CQ02209 353 aa3.6□□□□□ -1.83
SDC1YDR469W YML020WQ03722 664 aa3.6□□□□□ -1.83
SDC1YDR469W AIM44Q99299 758 aa3.6□□□□□ -1.83
SDC1YDR469W SPO11P23179 398 aa3.59□□□□□ -1.83
SDC1YDR469W YRO2P38079 344 aa3.59□□□□□ -1.83
SDC1YDR469W ERT1P38140 529 aa3.59□□□□□ -1.83
SDC1YDR469W HDA1P53973 706 aa3.59□□□□□ -1.83
SDC1YDR469W MRI1Q06489 411 aaKnown RBP3.59□□□□□ -1.83
SDC1YDR469W DMC1P25453 334 aa3.58□□□□□ -1.84
SDC1YDR469W SBA1P28707 216 aaKnown RBP3.58□□□□□ -1.84
SDC1YDR469W EMP70P32802 667 aa3.58□□□□□ -1.84
SDC1YDR469W HIS7P33734 552 aaKnown RBP3.58□□□□□ -1.84
SDC1YDR469W MNR2P35724 969 aa3.58□□□□□ -1.84
SDC1YDR469W GAT1P43574 510 aa3.58□□□□□ -1.84
SDC1YDR469W ASI2P53895 289 aa3.58□□□□□ -1.84
SDC1YDR469W APM1Q00776 475 aaPredicted RBP3.58□□□□□ -1.84
SDC1YDR469W GDE1Q02979 1223 aa3.58□□□□□ -1.84
SDC1YDR469W FAL1Q12099 399 aaKnown RBP3.58□□□□□ -1.84
SDC1YDR469W ADE8P04161 214 aa3.57□□□□□ -1.84
SDC1YDR469W AAR2P32357 355 aaPredicted RBP3.57□□□□□ -1.84
SDC1YDR469W VBA5P36172 582 aa3.57□□□□□ -1.84
SDC1YDR469W YJL206CP39529 758 aa3.57□□□□□ -1.84
SDC1YDR469W DAM1P53267 343 aa3.57□□□□□ -1.84
SDC1YDR469W SSL2Q00578 843 aa3.57□□□□□ -1.84
SDC1YDR469W PKH1Q03407 766 aa3.57□□□□□ -1.84
SDC1YDR469W SGO1Q08490 590 aa3.57□□□□□ -1.84
SDC1YDR469W AGP1P25376 633 aa3.56□□□□□ -1.84
SDC1YDR469W ORC2P32833 620 aa3.56□□□□□ -1.84
SDC1YDR469W YIR042CP40586 236 aa3.56□□□□□ -1.84
SDC1YDR469W CCT7P42943 550 aaKnown RBP3.56□□□□□ -1.84
SDC1YDR469W PUS2P53167 370 aa3.56□□□□□ -1.84
SDC1YDR469W ASM4Q05166 528 aa3.56□□□□□ -1.84
SDC1YDR469W URA1P28272 314 aaPredicted RBP3.55□□□□□ -1.84
SDC1YDR469W VPS16Q03308 798 aa3.55□□□□□ -1.84
SDC1YDR469W RPS9AO13516 197 aaKnown RBP3.54□□□□□ -1.84
SDC1YDR469W MPH2P0CD99 609 aa3.54□□□□□ -1.84
SDC1YDR469W CLN2P20438 545 aa3.54□□□□□ -1.84
SDC1YDR469W BCD1P38772 366 aa3.54□□□□□ -1.84
SDC1YDR469W TEL2P53038 688 aa3.54□□□□□ -1.84
SDC1YDR469W SMX3P54999 86 aaPredicted RBP3.54□□□□□ -1.84
SDC1YDR469W NRG1Q03125 231 aa3.54□□□□□ -1.84
SDC1YDR469W TAF3Q12297 353 aa3.54□□□□□ -1.84
SDC1YDR469W FMP52P40008 231 aa3.53□□□□□ -1.84
SDC1YDR469W KRI1P42846 591 aaKnown RBP3.53□□□□□ -1.84
SDC1YDR469W HSV2P50079 448 aaPredicted RBP3.53□□□□□ -1.84
SDC1YDR469W RIM13Q03792 727 aa3.53□□□□□ -1.84
SDC1YDR469W MUS81Q04149 632 aaPredicted RBP3.53□□□□□ -1.84
SDC1YDR469W LAT1P12695 482 aaKnown RBP3.52□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms