RNA–Protein interactions for RNA: YDR195W

REF2, Transcript of RNA-binding protein, yeast

Gene REF2, Length 1,602 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
REF2	YDR195W	TYE7	P33122	291 aa	Predicted RBP	5.04	□□□□□ -1.6
REF2	YDR195W	CTF4	Q01454	927 aa		5.04	□□□□□ -1.6
REF2	YDR195W	SSL1	Q04673	461 aa	Predicted RBP	5.04	□□□□□ -1.6
REF2	YDR195W	UBX5	Q06682	500 aa		5.04	□□□□□ -1.6
REF2	YDR195W	MSD1	P15179	658 aa	Known RBP	5.03	□□□□□ -1.6
REF2	YDR195W	ARE1	P25628	610 aa		5.03	□□□□□ -1.6
REF2	YDR195W	YBR284W	P38150	797 aa		5.03	□□□□□ -1.6
REF2	YDR195W	SDP1	P40479	209 aa		5.03	□□□□□ -1.6
REF2	YDR195W	BUL1	P48524	976 aa		5.03	□□□□□ -1.6
REF2	YDR195W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	5.03	□□□□□ -1.6	not detected
REF2	YDR195W	YKR011C	Q02209	353 aa		5.03	□□□□□ -1.6
REF2	YDR195W	HSP60	P19882	572 aa	Known RBP	5.02	□□□□□ -1.61
REF2	YDR195W	URA1	P28272	314 aa	Predicted RBP	5.02	□□□□□ -1.61
REF2	YDR195W	CTF8	P38877	133 aa		5.02	□□□□□ -1.61
REF2	YDR195W	YIL108W	P40483	696 aa	Known RBP	5.02	□□□□□ -1.61
REF2	YDR195W	HDA1	P53973	706 aa		5.02	□□□□□ -1.61
REF2	YDR195W	CIT1	P00890	479 aa		5.01	□□□□□ -1.61
REF2	YDR195W	MPH2	P0CD99	609 aa		5.01	□□□□□ -1.61
REF2	YDR195W	EFT1	P32324	842 aa	Known RBP	5.01	□□□□□ -1.61
REF2	YDR195W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	5.01	□□□□□ -1.61	not detected
REF2	YDR195W	SLU7	Q02775	382 aa	Known RBP	5.01	□□□□□ -1.61
REF2	YDR195W	TRP4	P07285	380 aa	Predicted RBP	5.01	□□□□□ -1.61
REF2	YDR195W	CAD1	P24813	409 aa	Known RBP	5.01	□□□□□ -1.61
REF2	YDR195W	RPD3	P32561	433 aa		5.01	□□□□□ -1.61
REF2	YDR195W	TIM54	P47045	478 aa		5.01	□□□□□ -1.61
REF2	YDR195W	ENV7	Q12003	364 aa		5.01	□□□□□ -1.61
REF2	YDR195W	KTR4	P38131	464 aa		5	□□□□□ -1.61
REF2	YDR195W	YHR020W	P38708	688 aa	Known RBP	5	□□□□□ -1.61
REF2	YDR195W	CEP3	P40969	608 aa		5	□□□□□ -1.61
REF2	YDR195W	UBP6	P43593	499 aa	Known RBP	5	□□□□□ -1.61
REF2	YDR195W	TAF8	Q03750	510 aa		5	□□□□□ -1.61
REF2	YDR195W	YDL124W	Q07551	312 aa	Known RBP	5	□□□□□ -1.61
REF2	YDR195W	TOP3	P13099	656 aa		4.99	□□□□□ -1.61
REF2	YDR195W	SEC21	P32074	935 aa	Known RBP	4.99	□□□□□ -1.61
REF2	YDR195W	HUL4	P40985	892 aa		4.99	□□□□□ -1.61
REF2	YDR195W	YGR125W	P53273	1036 aa		4.99	□□□□□ -1.61
REF2	YDR195W	RPS9A	O13516	197 aa	Known RBP	4.98	□□□□□ -1.61
REF2	YDR195W	NOG2	P53742	486 aa	Known RBP	4.98	□□□□□ -1.61
REF2	YDR195W	ERG5	P54781	538 aa		4.98	□□□□□ -1.61
REF2	YDR195W	PEX19	Q07418	342 aa		4.98	□□□□□ -1.61
REF2	YDR195W	NIT3	P49954	291 aa		4.97	□□□□□ -1.61
REF2	YDR195W	YLR040C	Q07988	224 aa		4.97	□□□□□ -1.61
REF2	YDR195W	FLC1	Q08967	793 aa		4.97	□□□□□ -1.61
REF2	YDR195W	ERG4	P25340	473 aa		4.97	□□□□□ -1.61
REF2	YDR195W	EMC3	P36039	253 aa		4.97	□□□□□ -1.61
REF2	YDR195W	GGA2	P38817	585 aa	Known RBP	4.97	□□□□□ -1.61
REF2	YDR195W	SWM1	Q12379	170 aa		4.97	□□□□□ -1.61
REF2	YDR195W	TUB3	P09734	445 aa	Known RBP	4.96	□□□□□ -1.62
REF2	YDR195W	RAD53	P22216	821 aa		4.96	□□□□□ -1.62
REF2	YDR195W	CTF13	P35203	478 aa		4.96	□□□□□ -1.62
REF2	YDR195W	YHR078W	P38799	552 aa		4.96	□□□□□ -1.62
REF2	YDR195W	HUL5	P53119	910 aa		4.96	□□□□□ -1.62
REF2	YDR195W	YOL073C	Q08232	322 aa		4.96	□□□□□ -1.62
REF2	YDR195W	TRM11	Q12463	433 aa		4.96	□□□□□ -1.62
REF2	YDR195W	OAR1	P35731	278 aa		4.95	□□□□□ -1.62
REF2	YDR195W	PUS2	P53167	370 aa		4.95	□□□□□ -1.62
REF2	YDR195W	BDF2	Q07442	638 aa		4.95	□□□□□ -1.62
REF2	YDR195W	CYS3	P31373	394 aa	Known RBP	4.94	□□□□□ -1.62
REF2	YDR195W	BET3	P36149	193 aa		4.94	□□□□□ -1.62
REF2	YDR195W	SUL1	P38359	859 aa		4.94	□□□□□ -1.62
REF2	YDR195W	NNF1	P47149	201 aa		4.94	□□□□□ -1.62
REF2	YDR195W	DAM1	P53267	343 aa		4.94	□□□□□ -1.62
REF2	YDR195W	YGR283C	P53336	341 aa	Predicted RBP	4.94	□□□□□ -1.62
REF2	YDR195W	TOM70	P07213	617 aa	Known RBP	4.94	□□□□□ -1.62
REF2	YDR195W	RSP5	P39940	809 aa	Known RBP	4.94	□□□□□ -1.62
REF2	YDR195W	GYP8	P43570	497 aa		4.94	□□□□□ -1.62
REF2	YDR195W	DUS1	P53759	423 aa	Known RBP	4.94	□□□□□ -1.62
REF2	YDR195W	RNT1	Q02555	471 aa		4.94	□□□□□ -1.62
REF2	YDR195W	CAN1	P04817	590 aa		4.93	□□□□□ -1.62
REF2	YDR195W	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.93	□□□□□ -1.62	not detected
REF2	YDR195W	GAL11	P19659	1081 aa		4.93	□□□□□ -1.62
REF2	YDR195W	DAL7	P21826	554 aa		4.93	□□□□□ -1.62
REF2	YDR195W	MOH1	P38191	138 aa		4.93	□□□□□ -1.62
REF2	YDR195W	ASI2	P53895	289 aa		4.93	□□□□□ -1.62
REF2	YDR195W	NSE3	Q05541	303 aa		4.93	□□□□□ -1.62
REF2	YDR195W	REH1	Q06709	432 aa		4.93	□□□□□ -1.62
REF2	YDR195W	HAL9	Q12180	1030 aa		4.93	□□□□□ -1.62
REF2	YDR195W	TAD3	Q9URQ3	322 aa		4.93	□□□□□ -1.62
REF2	YDR195W	ALG2	P43636	503 aa		4.92	□□□□□ -1.62
REF2	YDR195W	RTA1	P53047	317 aa		4.92	□□□□□ -1.62
REF2	YDR195W	ATP25	Q03153	612 aa		4.92	□□□□□ -1.62
REF2	YDR195W	OMS1	Q06668	471 aa		4.92	□□□□□ -1.62
REF2	YDR195W	PPM2	Q08282	695 aa		4.92	□□□□□ -1.62
REF2	YDR195W	PPR1	P07272	904 aa	Predicted RBP	4.91	□□□□□ -1.62
REF2	YDR195W	TAD1	P53065	400 aa		4.91	□□□□□ -1.62
REF2	YDR195W	YOR022C	Q12204	715 aa		4.91	□□□□□ -1.62
REF2	YDR195W	TRM13	Q12383	476 aa		4.91	□□□□□ -1.62
REF2	YDR195W	MET3	P08536	511 aa		4.9	□□□□□ -1.62
REF2	YDR195W	PRP4	P20053	465 aa	Known RBP	4.9	□□□□□ -1.62
REF2	YDR195W	DLT1	Q04216	342 aa		4.9	□□□□□ -1.62
REF2	YDR195W	CDC53	Q12018	815 aa	Known RBP	4.9	□□□□□ -1.62
REF2	YDR195W	PRC1	P00729	532 aa		4.9	□□□□□ -1.63
REF2	YDR195W	ALG7	P07286	448 aa		4.9	□□□□□ -1.63
REF2	YDR195W	RPP1	P38786	293 aa		4.9	□□□□□ -1.63
REF2	YDR195W	VHR1	P40522	640 aa		4.9	□□□□□ -1.63
REF2	YDR195W	GIS1	Q03833	894 aa		4.9	□□□□□ -1.63
REF2	YDR195W	LRS4	Q04087	347 aa	Known RBP	4.9	□□□□□ -1.63
REF2	YDR195W	YDR514C	Q04408	483 aa		4.9	□□□□□ -1.63
REF2	YDR195W	THI21	Q08975	551 aa		4.9	□□□□□ -1.63
REF2	YDR195W	NGG1	P32494	702 aa		4.89	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms