RNA–Protein interactions for RNA: YDR190C

RVB1, Transcript of ATP-dependent DNA helicase, also known as pontin, yeast

Gene RVB1, Length 1,392 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RVB1	YDR190C	GAS5	Q08193	484 aa		5.22	□□□□□ -1.57
RVB1	YDR190C	YPL216W	Q08964	1102 aa		5.22	□□□□□ -1.57
RVB1	YDR190C	KEL3	Q08979	651 aa	Predicted RBP	5.22	□□□□□ -1.57
RVB1	YDR190C	MCD1	Q12158	566 aa		5.22	□□□□□ -1.57
RVB1	YDR190C	CEX1	Q12453	761 aa		5.22	□□□□□ -1.57
RVB1	YDR190C	HKR1	P41809	1802 aa		5.21	□□□□□ -1.57
RVB1	YDR190C	RAS1	P01119	309 aa		5.21	□□□□□ -1.58
RVB1	YDR190C	LEU1	P07264	779 aa	Known RBP	5.21	□□□□□ -1.58
RVB1	YDR190C	PET111	P08468	800 aa		5.21	□□□□□ -1.58
RVB1	YDR190C	ALG1	P16661	449 aa		5.21	□□□□□ -1.58
RVB1	YDR190C	SRP54	P20424	541 aa	Known RBP	5.21	□□□□□ -1.58
RVB1	YDR190C	RPL8B	P29453	256 aa	Known RBP	5.21	□□□□□ -1.58
RVB1	YDR190C	HIR1	P32479	840 aa		5.21	□□□□□ -1.58
RVB1	YDR190C	PET10	P36139	283 aa		5.21	□□□□□ -1.58
RVB1	YDR190C	REI1	P38344	393 aa	Predicted RBP	5.21	□□□□□ -1.58
RVB1	YDR190C	ERG7	P38604	731 aa		5.21	□□□□□ -1.58
RVB1	YDR190C	MIP6	P38760	659 aa	Known RBP	5.21	□□□□□ -1.58
RVB1	YDR190C	AIM46	P38885	310 aa		5.21	□□□□□ -1.58
RVB1	YDR190C	CCC2	P38995	1004 aa		5.21	□□□□□ -1.58
RVB1	YDR190C	STT3	P39007	718 aa	Known RBP	5.21	□□□□□ -1.58
RVB1	YDR190C	CAJ1	P39101	391 aa		5.21	□□□□□ -1.58
RVB1	YDR190C	UBA2	P52488	636 aa		5.21	□□□□□ -1.58
RVB1	YDR190C	SDA1	P53313	767 aa	Known RBP	5.21	□□□□□ -1.58
RVB1	YDR190C	PRP42	Q03776	544 aa	Known RBP	5.21	□□□□□ -1.58
RVB1	YDR190C	SLK19	Q08581	821 aa	Known RBP	5.21	□□□□□ -1.58
RVB1	YDR190C	DSE3	Q08729	430 aa		5.21	□□□□□ -1.58
RVB1	YDR190C	RRP6	Q12149	733 aa	Known RBP	5.21	□□□□□ -1.58
RVB1	YDR190C	TIP41	Q12199	356 aa		5.21	□□□□□ -1.58
RVB1	YDR190C	SRF1	Q12516	437 aa		5.21	□□□□□ -1.58
RVB1	YDR190C	FIG2	P25653	1609 aa		5.21	□□□□□ -1.58
RVB1	YDR190C	MYO1	P08964	1928 aa		5.2	□□□□□ -1.58
RVB1	YDR190C	SPO12	P17123	173 aa		5.2	□□□□□ -1.58
RVB1	YDR190C	PDC6	P26263	563 aa	Known RBP	5.2	□□□□□ -1.58
RVB1	YDR190C	RPS7A	P26786	190 aa	Known RBP	5.2	□□□□□ -1.58
RVB1	YDR190C	YKU70	P32807	602 aa		5.2	□□□□□ -1.58
RVB1	YDR190C	PFF1	P38244	976 aa		5.2	□□□□□ -1.58
RVB1	YDR190C	BSD2	P38356	321 aa		5.2	□□□□□ -1.58
RVB1	YDR190C	BCD1	P38772	366 aa		5.2	□□□□□ -1.58
RVB1	YDR190C	FAA3	P39002	694 aa		5.2	□□□□□ -1.58
RVB1	YDR190C	CIN4	P39110	191 aa		5.2	□□□□□ -1.58
RVB1	YDR190C	RAD26	P40352	1085 aa		5.2	□□□□□ -1.58
RVB1	YDR190C	AIR1	P40507	360 aa	Known RBP	5.2	□□□□□ -1.58
RVB1	YDR190C	AIP1	P46680	615 aa	Known RBP	5.2	□□□□□ -1.58
RVB1	YDR190C	ASE1	P50275	885 aa		5.2	□□□□□ -1.58
RVB1	YDR190C	RTC4	P53850	401 aa		5.2	□□□□□ -1.58
RVB1	YDR190C	MDM1	Q01846	1127 aa		5.2	□□□□□ -1.58
RVB1	YDR190C	RBA50	Q04418	439 aa		5.2	□□□□□ -1.58
RVB1	YDR190C	ADY4	Q05955	493 aa		5.2	□□□□□ -1.58
RVB1	YDR190C	TY1A-DR3	Q12441	440 aa		5.2	□□□□□ -1.58
RVB1	YDR190C	YKL068W-A	Q3E826	78 aa		5.2	□□□□□ -1.58
RVB1	YDR190C	FLO1	P32768	1537 aa		5.19	□□□□□ -1.58
RVB1	YDR190C	NUC1	P08466	329 aa		5.19	□□□□□ -1.58
RVB1	YDR190C	THR4	P16120	514 aa	Known RBP	5.19	□□□□□ -1.58
RVB1	YDR190C	SPO11	P23179	398 aa		5.19	□□□□□ -1.58
RVB1	YDR190C	PRE9	P23638	258 aa	Known RBP	5.19	□□□□□ -1.58
RVB1	YDR190C	CHS3	P29465	1165 aa		5.19	□□□□□ -1.58
RVB1	YDR190C	YKL091C	P33324	310 aa	Known RBP	5.19	□□□□□ -1.58
RVB1	YDR190C	ECM2	P38241	364 aa	Known RBP	5.19	□□□□□ -1.58
RVB1	YDR190C	NDC80	P40460	691 aa		5.19	□□□□□ -1.58
RVB1	YDR190C	NUP85	P46673	744 aa		5.19	□□□□□ -1.58
RVB1	YDR190C	YJL049W	P47048	450 aa		5.19	□□□□□ -1.58
RVB1	YDR190C	SKP1	P52286	194 aa		5.19	□□□□□ -1.58
RVB1	YDR190C	CWC24	P53769	259 aa		5.19	□□□□□ -1.58
RVB1	YDR190C	FOL1	P53848	824 aa		5.19	□□□□□ -1.58
RVB1	YDR190C	ALF1	P53904	254 aa		5.19	□□□□□ -1.58
RVB1	YDR190C	VPS30	Q02948	557 aa		5.19	□□□□□ -1.58
RVB1	YDR190C	UME1	Q03010	460 aa		5.19	□□□□□ -1.58
RVB1	YDR190C	ERO1	Q03103	563 aa		5.19	□□□□□ -1.58
RVB1	YDR190C	VPS72	Q03388	795 aa		5.19	□□□□□ -1.58
RVB1	YDR190C	SML1	Q04964	104 aa		5.19	□□□□□ -1.58
RVB1	YDR190C	CWC2	Q12046	339 aa	Predicted RBP	5.19	□□□□□ -1.58
RVB1	YDR190C	PSF3	Q12146	194 aa		5.19	□□□□□ -1.58
RVB1	YDR190C	NAB2	P32505	525 aa	Known RBP RIP-Chip data	5.18	□□□□□ -1.58	not detected
RVB1	YDR190C	EFM2	P38347	419 aa		5.18	□□□□□ -1.58
RVB1	YDR190C	TOM71	P38825	639 aa	Known RBP	5.18	□□□□□ -1.58
RVB1	YDR190C	CIT3	P43635	486 aa		5.18	□□□□□ -1.58
RVB1	YDR190C	YJR098C	P47139	656 aa		5.18	□□□□□ -1.58
RVB1	YDR190C	YJR115W	P47152	169 aa		5.18	□□□□□ -1.58
RVB1	YDR190C	HFM1	P51979	1187 aa		5.18	□□□□□ -1.58
RVB1	YDR190C	DSE4	P53753	1117 aa		5.18	□□□□□ -1.58
RVB1	YDR190C	BOP3	P53958	396 aa		5.18	□□□□□ -1.58
RVB1	YDR190C	CUS1	Q02554	436 aa	Predicted RBP	5.18	□□□□□ -1.58
RVB1	YDR190C	UBX2	Q04228	584 aa		5.18	□□□□□ -1.58
RVB1	YDR190C	YLR287C	Q05881	355 aa		5.18	□□□□□ -1.58
RVB1	YDR190C	EMG1	Q06287	252 aa	Known RBP	5.18	□□□□□ -1.58
RVB1	YDR190C	YLR001C	Q07895	862 aa		5.18	□□□□□ -1.58
RVB1	YDR190C	HMI1	Q12039	706 aa		5.18	□□□□□ -1.58
RVB1	YDR190C	GSC2	P40989	1895 aa		5.18	□□□□□ -1.58
RVB1	YDR190C	MTF2	P10849	440 aa		5.17	□□□□□ -1.58
RVB1	YDR190C	SAM2	P19358	384 aa	Known RBP	5.17	□□□□□ -1.58
RVB1	YDR190C	STE11	P23561	717 aa		5.17	□□□□□ -1.58
RVB1	YDR190C	ICL1	P28240	557 aa	Predicted RBP	5.17	□□□□□ -1.58
RVB1	YDR190C	CCT3	P39077	534 aa	Known RBP	5.17	□□□□□ -1.58
RVB1	YDR190C	SAP1	P39955	897 aa	Known RBP	5.17	□□□□□ -1.58
RVB1	YDR190C	YIL165C	P40446	119 aa		5.17	□□□□□ -1.58
RVB1	YDR190C	SHQ1	P40486	507 aa	Predicted RBP	5.17	□□□□□ -1.58
RVB1	YDR190C	THI6	P41835	540 aa		5.17	□□□□□ -1.58
RVB1	YDR190C	RET3	P53600	189 aa		5.17	□□□□□ -1.58
RVB1	YDR190C	DOS2	P54858	310 aa		5.17	□□□□□ -1.58
RVB1	YDR190C	YPL109C	Q02981	657 aa		5.17	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 24.9 ms