RNA–Protein interactions for RNA: YDR171W

HSP42, Transcript of Small heat shock protein (sHSP) with chaperone activity, yeastyeast

Gene HSP42, Length 1,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSP42YDR171W AIM3P38266 947 aaKnown RBP5.29□□□□□ -1.56
HSP42YDR171W HSV2P50079 448 aaPredicted RBP5.29□□□□□ -1.56
HSP42YDR171W YKE2P52553 114 aa5.29□□□□□ -1.56
HSP42YDR171W PRP43P53131 767 aaKnown RBP5.29□□□□□ -1.56
HSP42YDR171W CDA1Q06702 301 aa5.29□□□□□ -1.56
HSP42YDR171W PHR1P05066 565 aaKnown RBP RIP-Chip data5.28□□□□□ -1.56not detected
HSP42YDR171W NOT3P06102 836 aaKnown RBP5.28□□□□□ -1.56
HSP42YDR171W RFA1P22336 621 aaKnown RBP5.28□□□□□ -1.56
HSP42YDR171W PRS1P32895 427 aaKnown RBP5.28□□□□□ -1.56
HSP42YDR171W MEF2P39677 819 aa5.28□□□□□ -1.56
HSP42YDR171W GYP8P43570 497 aa5.28□□□□□ -1.56
HSP42YDR171W ALG2P43636 503 aa5.28□□□□□ -1.56
HSP42YDR171W ALG12P53730 551 aa5.28□□□□□ -1.56
HSP42YDR171W ENV7Q12003 364 aa5.28□□□□□ -1.56
HSP42YDR171W GEA1P47102 1408 aaPredicted RBP5.28□□□□□ -1.56
HSP42YDR171W RPO31P04051 1460 aa5.27□□□□□ -1.57
HSP42YDR171W MET6P05694 767 aaKnown RBP5.27□□□□□ -1.57
HSP42YDR171W RPS13P05756 151 aaKnown RBP5.27□□□□□ -1.57
HSP42YDR171W TOP2P06786 1428 aaKnown RBP5.27□□□□□ -1.57
HSP42YDR171W HSF1P10961 833 aa5.27□□□□□ -1.57
HSP42YDR171W YBR238CP38330 731 aaKnown RBP5.27□□□□□ -1.57
HSP42YDR171W TSC11P40061 1430 aa5.27□□□□□ -1.57
HSP42YDR171W SPT20P50875 604 aa5.27□□□□□ -1.57
HSP42YDR171W MAL11P53048 616 aa5.27□□□□□ -1.57
HSP42YDR171W RAI1P53063 387 aaKnown RBP5.27□□□□□ -1.57
HSP42YDR171W GCN5Q03330 439 aa5.27□□□□□ -1.57
HSP42YDR171W PDR15Q04182 1529 aaKnown RBP5.27□□□□□ -1.57
HSP42YDR171W SPE1P08432 466 aa5.26□□□□□ -1.57
HSP42YDR171W RPC82P32349 654 aa5.26□□□□□ -1.57
HSP42YDR171W RPD3P32561 433 aa5.26□□□□□ -1.57
HSP42YDR171W SCT1P32784 759 aa5.26□□□□□ -1.57
HSP42YDR171W POA1P38218 177 aa5.26□□□□□ -1.57
HSP42YDR171W GDH3P39708 457 aa5.26□□□□□ -1.57
HSP42YDR171W TPO1Q07824 586 aa5.26□□□□□ -1.57
HSP42YDR171W GPB1Q08886 897 aa5.26□□□□□ -1.57
HSP42YDR171W YPL277CQ08989 487 aa5.26□□□□□ -1.57
HSP42YDR171W TY1B-DR3Q99231 1755 aa5.26□□□□□ -1.57
HSP42YDR171W KOG1P38873 1557 aa5.25□□□□□ -1.57
HSP42YDR171W YCF1P39109 1515 aaKnown RBP5.25□□□□□ -1.57
HSP42YDR171W MPH2P0CD99 609 aa5.25□□□□□ -1.57
HSP42YDR171W RAD53P22216 821 aa5.25□□□□□ -1.57
HSP42YDR171W CEP3P40969 608 aa5.25□□□□□ -1.57
HSP42YDR171W NIT3P49954 291 aa5.25□□□□□ -1.57
HSP42YDR171W PBP1P53297 722 aaKnown RBP5.25□□□□□ -1.57
HSP42YDR171W YDR132CQ03900 495 aa5.25□□□□□ -1.57
HSP42YDR171W DUS4Q06063 367 aa5.25□□□□□ -1.57
HSP42YDR171W WHI4Q07655 649 aaKnown RBP5.25□□□□□ -1.57
HSP42YDR171W CDC6P09119 513 aa5.24□□□□□ -1.57
HSP42YDR171W EMC1P25574 760 aa5.24□□□□□ -1.57
HSP42YDR171W URA1P28272 314 aaPredicted RBP5.24□□□□□ -1.57
HSP42YDR171W ELM1P32801 640 aa5.24□□□□□ -1.57
HSP42YDR171W STE13P33894 931 aa5.24□□□□□ -1.57
HSP42YDR171W RRP14P36080 434 aaKnown RBP5.24□□□□□ -1.57
HSP42YDR171W NIT1P40447 199 aa5.24□□□□□ -1.57
HSP42YDR171W PSP2P50109 593 aaKnown RBP5.24□□□□□ -1.57
HSP42YDR171W YGR283CP53336 341 aaPredicted RBP5.24□□□□□ -1.57
HSP42YDR171W YAP6Q03935 383 aa5.24□□□□□ -1.57
HSP42YDR171W SSL1Q04673 461 aaPredicted RBP5.24□□□□□ -1.57
HSP42YDR171W RXT3Q07458 294 aa5.24□□□□□ -1.57
HSP42YDR171W ULS1Q08562 1619 aa5.23□□□□□ -1.57
HSP42YDR171W SOD2P00447 233 aa5.23□□□□□ -1.57
HSP42YDR171W SPC29P33419 253 aa5.23□□□□□ -1.57
HSP42YDR171W TOD6P34219 525 aa5.23□□□□□ -1.57
HSP42YDR171W EMC3P36039 253 aa5.23□□□□□ -1.57
HSP42YDR171W NMD2P38798 1089 aaKnown RBP5.23□□□□□ -1.57
HSP42YDR171W ADY3Q07732 790 aa5.23□□□□□ -1.57
HSP42YDR171W HMI1Q12039 706 aa5.23□□□□□ -1.57
HSP42YDR171W TY2B-LR1P0C2J3 1770 aa5.23□□□□□ -1.57
HSP42YDR171W TY2B-FP0CX63 1770 aa5.23□□□□□ -1.57
HSP42YDR171W TY2B-GR2P0CX64 1770 aa5.23□□□□□ -1.57
HSP42YDR171W TY2B-CP25384 1770 aa5.23□□□□□ -1.57
HSP42YDR171W TY2B-DR2Q03494 1770 aa5.23□□□□□ -1.57
HSP42YDR171W TY1B-DR1Q03855 1755 aa5.23□□□□□ -1.57
HSP42YDR171W TY2B-DR3Q07791 1770 aaKnown RBP5.23□□□□□ -1.57
HSP42YDR171W TY2B-OR1Q12113 1770 aa5.23□□□□□ -1.57
HSP42YDR171W TY2B-DR1Q12472 1770 aa5.23□□□□□ -1.57
HSP42YDR171W TY2B-OR2Q12501 1770 aa5.23□□□□□ -1.57
HSP42YDR171W SRB8P25648 1427 aa5.23□□□□□ -1.57
HSP42YDR171W YLR419WQ06698 1435 aaKnown RBP5.23□□□□□ -1.57
HSP42YDR171W RPS9AO13516 197 aaKnown RBP5.22□□□□□ -1.57
HSP42YDR171W PRP6P19735 899 aaPredicted RBP5.22□□□□□ -1.57
HSP42YDR171W DAL7P21826 554 aa5.22□□□□□ -1.57
HSP42YDR171W MEF1P25039 761 aa5.22□□□□□ -1.57
HSP42YDR171W DSS1P39112 969 aa5.22□□□□□ -1.57
HSP42YDR171W MET12P46151 657 aa5.22□□□□□ -1.57
HSP42YDR171W TAD1P53065 400 aa5.22□□□□□ -1.57
HSP42YDR171W RIM8P53179 542 aa5.22□□□□□ -1.57
HSP42YDR171W VPS30Q02948 557 aa5.22□□□□□ -1.57
HSP42YDR171W MET7Q08645 548 aa5.22□□□□□ -1.57
HSP42YDR171W AIM44Q99299 758 aa5.22□□□□□ -1.57
HSP42YDR171W PER1P25625 357 aa5.21□□□□□ -1.58
HSP42YDR171W MSH2P25847 964 aa5.21□□□□□ -1.58
HSP42YDR171W CDC20P26309 610 aa5.21□□□□□ -1.58
HSP42YDR171W TYE7P33122 291 aaPredicted RBP5.21□□□□□ -1.58
HSP42YDR171W YIL108WP40483 696 aaKnown RBP5.21□□□□□ -1.58
HSP42YDR171W DAM1P53267 343 aa5.21□□□□□ -1.58
HSP42YDR171W VPS62P53285 467 aa5.21□□□□□ -1.58
HSP42YDR171W HDA1P53973 706 aa5.21□□□□□ -1.58
HSP42YDR171W YKR011CQ02209 353 aa5.21□□□□□ -1.58
HSP42YDR171W LRS4Q04087 347 aaKnown RBP5.21□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 64.4 ms