RNA–Protein interactions for RNA: YBL017C

PEP1, Transcript of Type I transmembrane sorting receptor for multiple vacuolar hydrolases, yeastyeast

Gene PEP1, Length 4,740 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP1YBL017C PRP2P20095 876 aaPredicted RBP2.06□□□□□ -2.08
PEP1YBL017C RRP14P36080 434 aaKnown RBP2.06□□□□□ -2.08
PEP1YBL017C MRPL40P36534 297 aa2.06□□□□□ -2.08
PEP1YBL017C CTR9P89105 1077 aa2.06□□□□□ -2.08
PEP1YBL017C SUE1Q06524 206 aa2.06□□□□□ -2.08
PEP1YBL017C DYN1P36022 4092 aa2.06□□□□□ -2.08
PEP1YBL017C CPA2P03965 1118 aaKnown RBP2.06□□□□□ -2.08
PEP1YBL017C VPS1P21576 704 aaKnown RBP2.06□□□□□ -2.08
PEP1YBL017C OYE3P41816 400 aaPredicted RBP2.06□□□□□ -2.08
PEP1YBL017C GSM1P42950 618 aa2.06□□□□□ -2.08
PEP1YBL017C TDA7P53882 636 aaPredicted RBP2.06□□□□□ -2.08
PEP1YBL017C YNL146WP53906 100 aa2.06□□□□□ -2.08
PEP1YBL017C ADE12P80210 433 aaKnown RBP2.06□□□□□ -2.08
PEP1YBL017C CEG1Q01159 459 aaPredicted RBP2.06□□□□□ -2.08
PEP1YBL017C MUK1Q02866 612 aa2.06□□□□□ -2.08
PEP1YBL017C SPC19Q03954 165 aa2.06□□□□□ -2.08
PEP1YBL017C NOP58Q12499 511 aaKnown RBP2.06□□□□□ -2.08
PEP1YBL017C URK1P27515 501 aa2.06□□□□□ -2.08
PEP1YBL017C TYE7P33122 291 aaPredicted RBP2.06□□□□□ -2.08
PEP1YBL017C ECM13P38195 257 aa2.06□□□□□ -2.08
PEP1YBL017C CTR1P49573 406 aa2.06□□□□□ -2.08
PEP1YBL017C RMD1Q03441 430 aa2.06□□□□□ -2.08
PEP1YBL017C PUS1Q12211 544 aaKnown RBP2.06□□□□□ -2.08
PEP1YBL017C AI5_BETAQ9ZZX0 354 aa2.06□□□□□ -2.08
PEP1YBL017C VMA1P17255 1071 aaKnown RBP2.06□□□□□ -2.08
PEP1YBL017C SHP1P34223 423 aa2.06□□□□□ -2.08
PEP1YBL017C YKR051WP36142 418 aa2.06□□□□□ -2.08
PEP1YBL017C SLN1P39928 1220 aaPredicted RBP2.06□□□□□ -2.08
PEP1YBL017C ART5P53244 586 aaKnown RBP2.06□□□□□ -2.08
PEP1YBL017C YPL277CQ08989 487 aa2.06□□□□□ -2.08
PEP1YBL017C ATG11Q12527 1178 aa2.06□□□□□ -2.08
PEP1YBL017C CIT1P00890 479 aa2.05□□□□□ -2.08
PEP1YBL017C ALD5P40047 520 aaKnown RBP2.05□□□□□ -2.08
PEP1YBL017C KTR7P40504 517 aa2.05□□□□□ -2.08
PEP1YBL017C RTT102P53330 157 aa2.05□□□□□ -2.08
PEP1YBL017C SXM1Q04175 944 aaKnown RBP2.05□□□□□ -2.08
PEP1YBL017C YDL073WQ07454 984 aa2.05□□□□□ -2.08
PEP1YBL017C PRI2P20457 528 aa2.05□□□□□ -2.08
PEP1YBL017C PGS1P25578 521 aa2.05□□□□□ -2.08
PEP1YBL017C TIF5P38431 405 aaKnown RBP2.05□□□□□ -2.08
PEP1YBL017C POL31P46957 487 aa2.05□□□□□ -2.08
PEP1YBL017C SLD5Q03406 294 aa2.05□□□□□ -2.08
PEP1YBL017C HMG2P12684 1045 aa2.05□□□□□ -2.08
PEP1YBL017C AAT2P23542 418 aaKnown RBP2.05□□□□□ -2.08
PEP1YBL017C NAM7P30771 971 aaKnown RBP2.05□□□□□ -2.08
PEP1YBL017C SET3P36124 751 aa2.05□□□□□ -2.08
PEP1YBL017C SFB3P38810 929 aa2.05□□□□□ -2.08
PEP1YBL017C ESL1P40456 1118 aa2.05□□□□□ -2.08
PEP1YBL017C VID28P40547 921 aa2.05□□□□□ -2.08
PEP1YBL017C NNF1P47149 201 aa2.05□□□□□ -2.08
PEP1YBL017C ASN1P49089 572 aaKnown RBP2.05□□□□□ -2.08
PEP1YBL017C INP52P50942 1183 aa2.05□□□□□ -2.08
PEP1YBL017C CUL3P53202 744 aa2.05□□□□□ -2.08
PEP1YBL017C BRE5P53741 515 aaKnown RBP2.05□□□□□ -2.08
PEP1YBL017C RPA49Q01080 415 aaPredicted RBP2.05□□□□□ -2.08
PEP1YBL017C LEE1Q02799 301 aaKnown RBP2.05□□□□□ -2.08
PEP1YBL017C PEX29Q03370 554 aa2.05□□□□□ -2.08
PEP1YBL017C RPP1BP10622 106 aaKnown RBP2.05□□□□□ -2.08
PEP1YBL017C RPL8AP17076 256 aaKnown RBP2.05□□□□□ -2.08
PEP1YBL017C HEM3P28789 327 aa2.05□□□□□ -2.08
PEP1YBL017C MMS4P38257 691 aa2.05□□□□□ -2.08
PEP1YBL017C NPR3P38742 1146 aa2.05□□□□□ -2.08
PEP1YBL017C FYV10P40492 516 aa2.05□□□□□ -2.08
PEP1YBL017C SYH1Q02875 849 aaKnown RBP2.05□□□□□ -2.08
PEP1YBL017C SLK19Q08581 821 aaKnown RBP2.05□□□□□ -2.08
PEP1YBL017C MSC6Q08818 692 aaKnown RBP2.05□□□□□ -2.08
PEP1YBL017C MPD2Q99316 277 aa2.05□□□□□ -2.08
PEP1YBL017C MSB2P32334 1306 aa2.04□□□□□ -2.08
PEP1YBL017C GAL80P04387 435 aa2.04□□□□□ -2.08
PEP1YBL017C TAF13P11747 167 aa2.04□□□□□ -2.08
PEP1YBL017C YPK1P12688 680 aaKnown RBP2.04□□□□□ -2.08
PEP1YBL017C KEX2P13134 814 aa2.04□□□□□ -2.08
PEP1YBL017C GDT1P38301 280 aaPredicted RBP2.04□□□□□ -2.08
PEP1YBL017C SIP3P38717 1229 aa2.04□□□□□ -2.08
PEP1YBL017C CIC1P38779 376 aaKnown RBP2.04□□□□□ -2.08
PEP1YBL017C SAH1P39954 449 aaKnown RBP2.04□□□□□ -2.08
PEP1YBL017C FTR1P40088 404 aa2.04□□□□□ -2.08
PEP1YBL017C RMD8P43620 662 aa2.04□□□□□ -2.08
PEP1YBL017C NPA3P47122 385 aa2.04□□□□□ -2.08
PEP1YBL017C LSC1P53598 329 aaKnown RBP2.04□□□□□ -2.08
PEP1YBL017C ESF1Q06344 628 aaKnown RBP2.04□□□□□ -2.08
PEP1YBL017C PLP2Q12017 286 aa2.04□□□□□ -2.08
PEP1YBL017C VAS1P07806 1104 aaKnown RBP2.04□□□□□ -2.08
PEP1YBL017C MAS2P11914 482 aa2.04□□□□□ -2.08
PEP1YBL017C PDR1P12383 1068 aa2.04□□□□□ -2.08
PEP1YBL017C PHO13P19881 312 aa2.04□□□□□ -2.08
PEP1YBL017C SEC21P32074 935 aaKnown RBP2.04□□□□□ -2.08
PEP1YBL017C REI1P38344 393 aaPredicted RBP2.04□□□□□ -2.08
PEP1YBL017C NEM1P38757 446 aa2.04□□□□□ -2.08
PEP1YBL017C GGA2P38817 585 aaKnown RBP2.04□□□□□ -2.08
PEP1YBL017C BIM1P40013 344 aa2.04□□□□□ -2.08
PEP1YBL017C OCA1P50946 238 aaPredicted RBP2.04□□□□□ -2.08
PEP1YBL017C VTC3Q02725 835 aa2.04□□□□□ -2.08
PEP1YBL017C MRD1Q06106 887 aaKnown RBP2.04□□□□□ -2.08
PEP1YBL017C RKM4Q12504 494 aa2.04□□□□□ -2.08
PEP1YBL017C PCT1P13259 424 aa2.04□□□□□ -2.08
PEP1YBL017C MTF1P14908 341 aaKnown RBP2.04□□□□□ -2.08
PEP1YBL017C KTR2P33550 425 aa2.04□□□□□ -2.08
PEP1YBL017C MRPL37P36532 105 aa2.04□□□□□ -2.08
PEP1YBL017C SSP1P38871 571 aa2.04□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 30.7 ms