RNA–Protein interactions for RNA: YOR378W

AMF1, Transcript of Putative paralog of ATR1, yeastyeast

Gene AMF1, Length 1,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AMF1YOR378W GPT2P36148 743 aa9.34□□□□□ -0.91
AMF1YOR378W SPT8P38915 602 aa9.34□□□□□ -0.91
AMF1YOR378W RRD1P40454 393 aaKnown RBP9.34□□□□□ -0.91
AMF1YOR378W FYV8P46949 817 aaKnown RBP9.34□□□□□ -0.91
AMF1YOR378W PSP2P50109 593 aaKnown RBP9.34□□□□□ -0.91
AMF1YOR378W CAF130P53280 1122 aaPredicted RBP9.34□□□□□ -0.91
AMF1YOR378W NCR1Q12200 1170 aa9.34□□□□□ -0.91
AMF1YOR378W MAS2P11914 482 aa9.33□□□□□ -0.92
AMF1YOR378W TRK2P28584 889 aa9.33□□□□□ -0.92
AMF1YOR378W IRE1P32361 1115 aa9.33□□□□□ -0.92
AMF1YOR378W FLR1P38124 548 aa9.33□□□□□ -0.92
AMF1YOR378W CCM1P48237 864 aaPredicted RBP9.33□□□□□ -0.92
AMF1YOR378W VPS75P53853 264 aa9.33□□□□□ -0.92
AMF1YOR378W COQ9Q05779 260 aa9.33□□□□□ -0.92
AMF1YOR378W DBP1P24784 617 aaKnown RBP9.32□□□□□ -0.92
AMF1YOR378W KIN82P25341 720 aa9.32□□□□□ -0.92
AMF1YOR378W YEL1P34225 687 aa9.32□□□□□ -0.92
AMF1YOR378W EAF5P39995 279 aa9.32□□□□□ -0.92
AMF1YOR378W YJR107WP47145 328 aa9.32□□□□□ -0.92
AMF1YOR378W BRE5P53741 515 aaKnown RBP9.32□□□□□ -0.92
AMF1YOR378W YML020WQ03722 664 aa9.32□□□□□ -0.92
AMF1YOR378W UBC1P21734 215 aaKnown RBP9.31□□□□□ -0.92
AMF1YOR378W NAM7P30771 971 aaKnown RBP9.31□□□□□ -0.92
AMF1YOR378W EFT1P32324 842 aaKnown RBP9.31□□□□□ -0.92
AMF1YOR378W MIP6P38760 659 aaKnown RBP9.31□□□□□ -0.92
AMF1YOR378W ERC1P38767 581 aa9.31□□□□□ -0.92
AMF1YOR378W AVT1P47082 602 aa9.31□□□□□ -0.92
AMF1YOR378W RTT102P53330 157 aa9.31□□□□□ -0.92
AMF1YOR378W RPS6AP0CX37 236 aaKnown RBP9.31□□□□□ -0.92
AMF1YOR378W RPS6BP0CX38 236 aaPredicted RBP9.31□□□□□ -0.92
AMF1YOR378W SNA3P14359 133 aa9.31□□□□□ -0.92
AMF1YOR378W PHO13P19881 312 aa9.31□□□□□ -0.92
AMF1YOR378W SPO11P23179 398 aa9.31□□□□□ -0.92
AMF1YOR378W SEC65P29478 273 aa9.31□□□□□ -0.92
AMF1YOR378W BCS1P32839 456 aa9.31□□□□□ -0.92
AMF1YOR378W RPC25P35718 212 aa9.31□□□□□ -0.92
AMF1YOR378W MNN4P36044 1178 aa9.31□□□□□ -0.92
AMF1YOR378W KSP1P38691 1029 aaKnown RBP9.31□□□□□ -0.92
AMF1YOR378W UBP5P39944 805 aa9.31□□□□□ -0.92
AMF1YOR378W SKP2P42843 763 aa9.31□□□□□ -0.92
AMF1YOR378W TAM41P53230 385 aa9.31□□□□□ -0.92
AMF1YOR378W SPO75Q07798 868 aa9.31□□□□□ -0.92
AMF1YOR378W OSW2Q12202 724 aa9.31□□□□□ -0.92
AMF1YOR378W SUT2Q12286 268 aa9.31□□□□□ -0.92
AMF1YOR378W SCP160P06105 1222 aaKnown RBP RIP-Chip data9.3□□□□□ -0.92not detected
AMF1YOR378W CYC8P14922 966 aa9.3□□□□□ -0.92
AMF1YOR378W SSD1P24276 1250 aaKnown RBP RIP-Chip data9.3□□□□□ -0.92not detected
AMF1YOR378W APL1P27351 700 aa9.3□□□□□ -0.92
AMF1YOR378W SHM1P37292 490 aaPredicted RBP9.3□□□□□ -0.92
AMF1YOR378W EFM2P38347 419 aa9.3□□□□□ -0.92
AMF1YOR378W GUA1P38625 525 aaKnown RBP9.3□□□□□ -0.92
AMF1YOR378W PRY3P47033 881 aa9.3□□□□□ -0.92
AMF1YOR378W DAK1P54838 584 aaKnown RBP9.3□□□□□ -0.92
AMF1YOR378W MSC2Q03455 724 aa9.3□□□□□ -0.92
AMF1YOR378W IES4Q08561 116 aa9.3□□□□□ -0.92
AMF1YOR378W HIF1Q12373 385 aa9.3□□□□□ -0.92
AMF1YOR378W YOR131CQ12486 218 aa9.3□□□□□ -0.92
AMF1YOR378W ECM29P38737 1868 aa9.3□□□□□ -0.92
AMF1YOR378W SWI6P09959 803 aa9.29□□□□□ -0.92
AMF1YOR378W AFT1P22149 690 aa9.29□□□□□ -0.92
AMF1YOR378W SMY2P32909 740 aaKnown RBP9.29□□□□□ -0.92
AMF1YOR378W PXL1P36166 706 aa9.29□□□□□ -0.92
AMF1YOR378W LEO1P38439 464 aa9.29□□□□□ -0.92
AMF1YOR378W AIM21P40563 679 aa9.29□□□□□ -0.92
AMF1YOR378W ULP1Q02724 621 aa9.29□□□□□ -0.92
AMF1YOR378W GIR2Q03768 265 aaPredicted RBP9.29□□□□□ -0.92
AMF1YOR378W RLP24Q07915 199 aaKnown RBP9.29□□□□□ -0.92
AMF1YOR378W HFI1Q12060 488 aa9.29□□□□□ -0.92
AMF1YOR378W ATG11Q12527 1178 aa9.29□□□□□ -0.92
AMF1YOR378W RTP1Q12751 981 aa9.29□□□□□ -0.92
AMF1YOR378W SPC110P32380 944 aa9.28□□□□□ -0.92
AMF1YOR378W LCB2P40970 561 aa9.28□□□□□ -0.92
AMF1YOR378W ACF4P47129 309 aa9.28□□□□□ -0.92
AMF1YOR378W COS5P47187 383 aa9.28□□□□□ -0.92
AMF1YOR378W VTC3Q02725 835 aa9.28□□□□□ -0.92
AMF1YOR378W MLH2Q07980 695 aa9.28□□□□□ -0.92
AMF1YOR378W FAL1Q12099 399 aaKnown RBP9.28□□□□□ -0.92
AMF1YOR378W SSB1P11484 613 aaKnown RBP9.27□□□□□ -0.93
AMF1YOR378W CHS2P14180 963 aa9.27□□□□□ -0.93
AMF1YOR378W DPH2P32461 534 aa9.27□□□□□ -0.93
AMF1YOR378W PAH1P32567 862 aa9.27□□□□□ -0.93
AMF1YOR378W SSB2P40150 613 aaKnown RBP9.27□□□□□ -0.93
AMF1YOR378W JJJ3P47138 172 aa9.27□□□□□ -0.93
AMF1YOR378W STR2P47164 639 aa9.27□□□□□ -0.93
AMF1YOR378W SHE10P53075 577 aa9.27□□□□□ -0.93
AMF1YOR378W YNL146WP53906 100 aa9.27□□□□□ -0.93
AMF1YOR378W TIM8P57744 87 aa9.27□□□□□ -0.93
AMF1YOR378W DON1Q05610 365 aa9.27□□□□□ -0.93
AMF1YOR378W YLR287CQ05881 355 aa9.27□□□□□ -0.93
AMF1YOR378W PLP2Q12017 286 aa9.27□□□□□ -0.93
AMF1YOR378W CDC53Q12018 815 aaKnown RBP9.27□□□□□ -0.93
AMF1YOR378W CWC2Q12046 339 aaPredicted RBP9.27□□□□□ -0.93
AMF1YOR378W MDM20Q12387 796 aaKnown RBP9.27□□□□□ -0.93
AMF1YOR378W RTT107P38850 1070 aa9.26□□□□□ -0.93
AMF1YOR378W FIG4P42837 879 aa9.26□□□□□ -0.93
AMF1YOR378W HFM1P51979 1187 aa9.26□□□□□ -0.93
AMF1YOR378W CUL3P53202 744 aa9.26□□□□□ -0.93
AMF1YOR378W MUD1P32605 298 aaKnown RBP9.26□□□□□ -0.93
AMF1YOR378W KTR2P33550 425 aa9.26□□□□□ -0.93
AMF1YOR378W AFG3P39925 761 aa9.26□□□□□ -0.93
Retrieved 100 of 5,963 RNA–protein pairs in 20.2 ms