RNA–Protein interactions for RNA: YMR172C-A

YMR172C-A, Transcript of Dubious open reading frame, yeastyeast

Gene YMR172C-A, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YMR172C-AYMR172C-A MTC3P53077 123 aa2.86□□□□□ -1.95
YMR172C-AYMR172C-A SRT1Q03175 343 aa2.86□□□□□ -1.95
YMR172C-AYMR172C-A NAB6Q03735 1134 aaKnown RBP RIP-Chip data2.86□□□□□ -1.95not detected
YMR172C-AYMR172C-A SPO20Q04359 397 aa2.86□□□□□ -1.95
YMR172C-AYMR172C-A TMN2Q04562 672 aa2.86□□□□□ -1.95
YMR172C-AYMR172C-A SED4P25365 1065 aa2.85□□□□□ -1.95
YMR172C-AYMR172C-A FUN30P31380 1131 aa2.85□□□□□ -1.95
YMR172C-AYMR172C-A PET112P33893 541 aa2.85□□□□□ -1.95
YMR172C-AYMR172C-A CUE2P36075 443 aaKnown RBP2.85□□□□□ -1.95
YMR172C-AYMR172C-A NCS6P53088 359 aa2.85□□□□□ -1.95
YMR172C-AYMR172C-A NPL3Q01560 414 aaKnown RBP RIP-Chip data2.85□□□□□ -1.95not detected
YMR172C-AYMR172C-A RNT1Q02555 471 aa2.85□□□□□ -1.95
YMR172C-AYMR172C-A HRQ1Q05549 1077 aa2.85□□□□□ -1.95
YMR172C-AYMR172C-A YLR225CQ05948 407 aaKnown RBP2.84□□□□□ -1.95
YMR172C-AYMR172C-A GUP2Q08929 609 aa2.84□□□□□ -1.95
YMR172C-AYMR172C-A YPL066WQ12194 479 aa2.84□□□□□ -1.95
YMR172C-AYMR172C-A YLL058WQ12198 575 aa2.84□□□□□ -1.95
YMR172C-AYMR172C-A LAS17Q12446 633 aa2.84□□□□□ -1.95
YMR172C-AYMR172C-A PEX2P32800 271 aa2.83□□□□□ -1.96
YMR172C-AYMR172C-A GIC1P38785 314 aa2.83□□□□□ -1.96
YMR172C-AYMR172C-A URM1P40554 99 aaPredicted RBP2.83□□□□□ -1.96
YMR172C-AYMR172C-A QRI1P43123 477 aaKnown RBP2.83□□□□□ -1.96
YMR172C-AYMR172C-A SRP1Q02821 542 aaKnown RBP2.83□□□□□ -1.96
YMR172C-AYMR172C-A SEN54Q02825 467 aaPredicted RBP2.83□□□□□ -1.96
YMR172C-AYMR172C-A IRC10Q08118 586 aa2.83□□□□□ -1.96
YMR172C-AYMR172C-A ATE1P16639 503 aa2.82□□□□□ -1.96
YMR172C-AYMR172C-A SPC42P36094 363 aa2.82□□□□□ -1.96
YMR172C-AYMR172C-A YER158CP40095 573 aa2.82□□□□□ -1.96
YMR172C-AYMR172C-A YJR107WP47145 328 aa2.82□□□□□ -1.96
YMR172C-AYMR172C-A GND2P53319 492 aa2.82□□□□□ -1.96
YMR172C-AYMR172C-A SFB2P53953 876 aa2.82□□□□□ -1.96
YMR172C-AYMR172C-A MUK1Q02866 612 aa2.82□□□□□ -1.96
YMR172C-AYMR172C-A HBT1Q07653 1046 aaKnown RBP2.82□□□□□ -1.96
YMR172C-AYMR172C-A PPR1P07272 904 aaPredicted RBP2.81□□□□□ -1.96
YMR172C-AYMR172C-A ALG7P07286 448 aa2.81□□□□□ -1.96
YMR172C-AYMR172C-A YKL151CP36059 337 aa2.81□□□□□ -1.96
YMR172C-AYMR172C-A BUL1P48524 976 aa2.81□□□□□ -1.96
YMR172C-AYMR172C-A RAI1P53063 387 aaKnown RBP2.81□□□□□ -1.96
YMR172C-AYMR172C-A TRP4P07285 380 aaPredicted RBP2.8□□□□□ -1.96
YMR172C-AYMR172C-A CDC34P14682 295 aa2.8□□□□□ -1.96
YMR172C-AYMR172C-A PIN4P34217 668 aaKnown RBP RIP-Chip data2.8□□□□□ -1.96not detected
YMR172C-AYMR172C-A MTH1P35198 433 aa2.8□□□□□ -1.96
YMR172C-AYMR172C-A EEB1Q02891 456 aa2.8□□□□□ -1.96
YMR172C-AYMR172C-A VPS30Q02948 557 aa2.8□□□□□ -1.96
YMR172C-AYMR172C-A DUS3Q06053 668 aaKnown RBP2.8□□□□□ -1.96
YMR172C-AYMR172C-A UPC2Q12151 913 aa2.8□□□□□ -1.96
YMR172C-AYMR172C-A RPC82P32349 654 aa2.79□□□□□ -1.96
YMR172C-AYMR172C-A KRI1P42846 591 aaKnown RBP2.79□□□□□ -1.96
YMR172C-AYMR172C-A RMD1Q03441 430 aa2.79□□□□□ -1.96
YMR172C-AYMR172C-A OYE2Q03558 400 aaKnown RBP2.79□□□□□ -1.96
YMR172C-AYMR172C-A PEX19Q07418 342 aa2.79□□□□□ -1.96
YMR172C-AYMR172C-A MET3P08536 511 aa2.78□□□□□ -1.96
YMR172C-AYMR172C-A PPH3P32345 308 aa2.78□□□□□ -1.96
YMR172C-AYMR172C-A ABD1P32783 436 aaPredicted RBP2.78□□□□□ -1.96
YMR172C-AYMR172C-A DUT1P33317 147 aa2.78□□□□□ -1.96
YMR172C-AYMR172C-A ESC2Q06340 456 aa2.78□□□□□ -1.96
YMR172C-AYMR172C-A NOT3P06102 836 aaKnown RBP2.77□□□□□ -1.97
YMR172C-AYMR172C-A PPZ2P33329 710 aa2.77□□□□□ -1.97
YMR172C-AYMR172C-A MBP1P39678 833 aa2.77□□□□□ -1.97
YMR172C-AYMR172C-A NPP2P39997 493 aa2.77□□□□□ -1.97
YMR172C-AYMR172C-A DAS1P47005 663 aa2.77□□□□□ -1.97
YMR172C-AYMR172C-A FRE5Q08908 694 aa2.77□□□□□ -1.97
YMR172C-AYMR172C-A TRM13Q12383 476 aa2.77□□□□□ -1.97
YMR172C-AYMR172C-A CDC12P32468 407 aaKnown RBP2.76□□□□□ -1.97
YMR172C-AYMR172C-A PPS1P38148 807 aa2.76□□□□□ -1.97
YMR172C-AYMR172C-A SDS3P40505 327 aa2.76□□□□□ -1.97
YMR172C-AYMR172C-A DLT1Q04216 342 aa2.76□□□□□ -1.97
YMR172C-AYMR172C-A CRR1Q05790 422 aa2.76□□□□□ -1.97
YMR172C-AYMR172C-A YDR306CQ06640 478 aa2.76□□□□□ -1.97
YMR172C-AYMR172C-A FAL1Q12099 399 aaKnown RBP2.76□□□□□ -1.97
YMR172C-AYMR172C-A MRH1Q12117 320 aaPredicted RBP2.76□□□□□ -1.97
YMR172C-AYMR172C-A SWM1Q12379 170 aa2.76□□□□□ -1.97
YMR172C-AYMR172C-A GFA1P14742 717 aaKnown RBP2.75□□□□□ -1.97
YMR172C-AYMR172C-A CDC43P18898 376 aa2.75□□□□□ -1.97
YMR172C-AYMR172C-A RFA1P22336 621 aaKnown RBP2.75□□□□□ -1.97
YMR172C-AYMR172C-A CDC48P25694 835 aaKnown RBP2.75□□□□□ -1.97
YMR172C-AYMR172C-A YHL017WP38745 532 aa2.75□□□□□ -1.97
YMR172C-AYMR172C-A MET10P39692 1035 aa2.75□□□□□ -1.97
YMR172C-AYMR172C-A ELO3P40319 345 aa2.75□□□□□ -1.97
YMR172C-AYMR172C-A GYP7P48365 746 aa2.75□□□□□ -1.97
YMR172C-AYMR172C-A GDE1Q02979 1223 aa2.75□□□□□ -1.97
YMR172C-AYMR172C-A SSL1Q04673 461 aaPredicted RBP2.75□□□□□ -1.97
YMR172C-AYMR172C-A CAF20P12962 161 aaKnown RBP2.74□□□□□ -1.97
YMR172C-AYMR172C-A HCA4P20448 770 aaKnown RBP2.74□□□□□ -1.97
YMR172C-AYMR172C-A ASF1P32447 279 aa2.74□□□□□ -1.97
YMR172C-AYMR172C-A MNR2P35724 969 aa2.74□□□□□ -1.97
YMR172C-AYMR172C-A TDP1P38319 544 aa2.74□□□□□ -1.97
YMR172C-AYMR172C-A YIL108WP40483 696 aaKnown RBP2.74□□□□□ -1.97
YMR172C-AYMR172C-A CWC24P53769 259 aa2.74□□□□□ -1.97
YMR172C-AYMR172C-A AFT2Q08957 416 aa2.74□□□□□ -1.97
YMR172C-AYMR172C-A NDJ1Q12366 352 aa2.74□□□□□ -1.97
YMR172C-AYMR172C-A SEC21P32074 935 aaKnown RBP2.73□□□□□ -1.97
YMR172C-AYMR172C-A AAR2P32357 355 aaPredicted RBP2.73□□□□□ -1.97
YMR172C-AYMR172C-A RPD3P32561 433 aa2.73□□□□□ -1.97
YMR172C-AYMR172C-A STE14P32584 239 aa2.73□□□□□ -1.97
YMR172C-AYMR172C-A STE13P33894 931 aa2.73□□□□□ -1.97
YMR172C-AYMR172C-A YKR078WP36158 585 aaKnown RBP2.73□□□□□ -1.97
YMR172C-AYMR172C-A CEP3P40969 608 aa2.73□□□□□ -1.97
YMR172C-AYMR172C-A FAA4P47912 694 aaKnown RBP2.73□□□□□ -1.97
YMR172C-AYMR172C-A RRP15Q06511 250 aaPredicted RBP2.73□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 21.8 ms