RNA–Protein interactions for RNA: YMR159C

ATG16, Transcript of Conserved protein involved in autophagy, yeastyeast

Gene ATG16, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG16YMR159C NPL3Q01560 414 aaKnown RBP RIP-Chip data5.94□□□□□ -1.46not detected
ATG16YMR159C LCD1Q04377 747 aa5.94□□□□□ -1.46
ATG16YMR159C VTS1Q08831 523 aaKnown RBP RIP-Chip data5.94□□□□□ -1.46not detected
ATG16YMR159C GAL11P19659 1081 aa5.93□□□□□ -1.46
ATG16YMR159C NPP1P25353 742 aa5.93□□□□□ -1.46
ATG16YMR159C CDC48P25694 835 aaKnown RBP5.93□□□□□ -1.46
ATG16YMR159C PET10P36139 283 aa5.93□□□□□ -1.46
ATG16YMR159C MEF2P39677 819 aa5.93□□□□□ -1.46
ATG16YMR159C CHZ1P40019 153 aaPredicted RBP5.93□□□□□ -1.46
ATG16YMR159C YER158CP40095 573 aa5.93□□□□□ -1.46
ATG16YMR159C CCM1P48237 864 aaPredicted RBP5.93□□□□□ -1.46
ATG16YMR159C RIM8P53179 542 aa5.93□□□□□ -1.46
ATG16YMR159C PLB2Q03674 706 aa5.93□□□□□ -1.46
ATG16YMR159C PPM2Q08282 695 aa5.93□□□□□ -1.46
ATG16YMR159C SOD2P00447 233 aa5.92□□□□□ -1.46
ATG16YMR159C PRP6P19735 899 aaPredicted RBP5.92□□□□□ -1.46
ATG16YMR159C YKL091CP33324 310 aaKnown RBP5.92□□□□□ -1.46
ATG16YMR159C YDR132CQ03900 495 aa5.92□□□□□ -1.46
ATG16YMR159C FPR4Q06205 392 aaPredicted RBP5.92□□□□□ -1.46
ATG16YMR159C YDL124WQ07551 312 aaKnown RBP5.92□□□□□ -1.46
ATG16YMR159C CAN1P04817 590 aa5.91□□□□□ -1.46
ATG16YMR159C RNQ1P25367 405 aa5.91□□□□□ -1.46
ATG16YMR159C DOM34P33309 386 aa5.91□□□□□ -1.46
ATG16YMR159C ZRG8P40021 1076 aa5.91□□□□□ -1.46
ATG16YMR159C MND2P40577 368 aa5.91□□□□□ -1.46
ATG16YMR159C BUD6P41697 788 aa5.91□□□□□ -1.46
ATG16YMR159C SFB2P53953 876 aa5.91□□□□□ -1.46
ATG16YMR159C GCN5Q03330 439 aa5.91□□□□□ -1.46
ATG16YMR159C DUS4Q06063 367 aa5.91□□□□□ -1.46
ATG16YMR159C YPL277CQ08989 487 aa5.91□□□□□ -1.46
ATG16YMR159C YPR071WQ12346 211 aa5.91□□□□□ -1.46
ATG16YMR159C RPS13P05756 151 aaKnown RBP5.9□□□□□ -1.46
ATG16YMR159C HSF1P10961 833 aa5.9□□□□□ -1.46
ATG16YMR159C REC104P33323 182 aa5.9□□□□□ -1.46
ATG16YMR159C YBR284WP38150 797 aa5.9□□□□□ -1.46
ATG16YMR159C AIM3P38266 947 aaKnown RBP5.9□□□□□ -1.46
ATG16YMR159C TOK1P40310 691 aa5.9□□□□□ -1.46
ATG16YMR159C IRC24P40580 263 aa5.9□□□□□ -1.46
ATG16YMR159C ROT1Q03691 256 aa5.9□□□□□ -1.46
ATG16YMR159C CDA1Q06702 301 aa5.9□□□□□ -1.46
ATG16YMR159C RPP2AP05319 106 aaKnown RBP5.89□□□□□ -1.47
ATG16YMR159C MSD1P15179 658 aaKnown RBP5.89□□□□□ -1.47
ATG16YMR159C UBP6P43593 499 aaKnown RBP5.89□□□□□ -1.47
ATG16YMR159C YGR012WP53206 393 aa5.89□□□□□ -1.47
ATG16YMR159C YPR196WQ06595 470 aa5.89□□□□□ -1.47
ATG16YMR159C CDC6P09119 513 aa5.88□□□□□ -1.47
ATG16YMR159C TOP3P13099 656 aa5.88□□□□□ -1.47
ATG16YMR159C THI80P35202 319 aa5.88□□□□□ -1.47
ATG16YMR159C BET3P36149 193 aa5.88□□□□□ -1.47
ATG16YMR159C PBP2P38151 413 aaKnown RBP RIP-Chip data5.88□□□□□ -1.47not detected
ATG16YMR159C OSW7P43611 510 aa5.88□□□□□ -1.47
ATG16YMR159C VPS62P53285 467 aa5.88□□□□□ -1.47
ATG16YMR159C ORC1P54784 914 aaPredicted RBP5.88□□□□□ -1.47
ATG16YMR159C RXT3Q07458 294 aa5.88□□□□□ -1.47
ATG16YMR159C ADY3Q07732 790 aa5.88□□□□□ -1.47
ATG16YMR159C TPO1Q07824 586 aa5.88□□□□□ -1.47
ATG16YMR159C GPB1Q08886 897 aa5.88□□□□□ -1.47
ATG16YMR159C ENA1P13587 1091 aa5.87□□□□□ -1.47
ATG16YMR159C SRP101P32916 621 aa5.87□□□□□ -1.47
ATG16YMR159C POA1P38218 177 aa5.87□□□□□ -1.47
ATG16YMR159C PSP2P50109 593 aaKnown RBP5.87□□□□□ -1.47
ATG16YMR159C RTA1P53047 317 aa5.87□□□□□ -1.47
ATG16YMR159C ENA2Q01896 1091 aa5.87□□□□□ -1.47
ATG16YMR159C HMI1Q12039 706 aa5.87□□□□□ -1.47
ATG16YMR159C ENA5Q12691 1091 aa5.87□□□□□ -1.47
ATG16YMR159C ATG19P35193 415 aa5.86□□□□□ -1.47
ATG16YMR159C UBP5P39944 805 aa5.86□□□□□ -1.47
ATG16YMR159C MET12P46151 657 aa5.86□□□□□ -1.47
ATG16YMR159C ACK1Q07622 623 aaPredicted RBP5.86□□□□□ -1.47
ATG16YMR159C PRE10P21242 288 aaKnown RBP RIP-Chip data5.85□□□□□ -1.47not detected
ATG16YMR159C CDC20P26309 610 aa5.85□□□□□ -1.47
ATG16YMR159C ERT1P38140 529 aa5.85□□□□□ -1.47
ATG16YMR159C SPT20P50875 604 aa5.85□□□□□ -1.47
ATG16YMR159C RAI1P53063 387 aaKnown RBP5.85□□□□□ -1.47
ATG16YMR159C NOP12Q08208 459 aaKnown RBP5.85□□□□□ -1.47
ATG16YMR159C HIS5P07172 385 aa5.84□□□□□ -1.47
ATG16YMR159C TOM70P07213 617 aaKnown RBP5.84□□□□□ -1.47
ATG16YMR159C SPE1P08432 466 aa5.84□□□□□ -1.47
ATG16YMR159C CIT2P08679 460 aa5.84□□□□□ -1.47
ATG16YMR159C CHA4P43634 648 aa5.84□□□□□ -1.47
ATG16YMR159C GTF1P53260 183 aaPredicted RBP5.84□□□□□ -1.47
ATG16YMR159C ENV7Q12003 364 aa5.84□□□□□ -1.47
ATG16YMR159C YLR358CO13565 187 aa5.83□□□□□ -1.48
ATG16YMR159C NOT3P06102 836 aaKnown RBP5.83□□□□□ -1.48
ATG16YMR159C STE13P33894 931 aa5.83□□□□□ -1.48
ATG16YMR159C TOD6P34219 525 aa5.83□□□□□ -1.48
ATG16YMR159C NUP82P40368 713 aa5.83□□□□□ -1.48
ATG16YMR159C URM1P40554 99 aaPredicted RBP5.83□□□□□ -1.48
ATG16YMR159C VPS30Q02948 557 aa5.83□□□□□ -1.48
ATG16YMR159C YLR125WQ12138 136 aa5.83□□□□□ -1.48
ATG16YMR159C MPH2P0CD99 609 aa5.82□□□□□ -1.48
ATG16YMR159C EMC1P25574 760 aa5.82□□□□□ -1.48
ATG16YMR159C TIM23P32897 222 aa5.82□□□□□ -1.48
ATG16YMR159C EMC3P36039 253 aa5.82□□□□□ -1.48
ATG16YMR159C NIT3P49954 291 aa5.82□□□□□ -1.48
ATG16YMR159C DAM1P53267 343 aa5.82□□□□□ -1.48
ATG16YMR159C YGR283CP53336 341 aaPredicted RBP5.82□□□□□ -1.48
ATG16YMR159C ERR1P0CX10 437 aa5.81□□□□□ -1.48
ATG16YMR159C ERR2P0CX11 437 aa5.81□□□□□ -1.48
ATG16YMR159C RFA1P22336 621 aaKnown RBP5.81□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms