RNA–Protein interactions for RNA: YMR022W

UBC7, Transcript of Ubiquitin conjugating enzyme, yeast

Gene UBC7, Length 498 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC7	YMR022W	CAD1	P24813	409 aa	Known RBP	3.71	□□□□□ -1.82
UBC7	YMR022W	AAR2	P32357	355 aa	Predicted RBP	3.71	□□□□□ -1.82
UBC7	YMR022W	ABD1	P32783	436 aa	Predicted RBP	3.71	□□□□□ -1.82
UBC7	YMR022W	SIP5	P40210	489 aa	Known RBP	3.71	□□□□□ -1.82
UBC7	YMR022W	FAA4	P47912	694 aa	Known RBP	3.71	□□□□□ -1.82
UBC7	YMR022W	PHO23	P50947	330 aa		3.71	□□□□□ -1.82
UBC7	YMR022W	CTF4	Q01454	927 aa		3.71	□□□□□ -1.82
UBC7	YMR022W	SHE9	Q04172	456 aa		3.71	□□□□□ -1.82
UBC7	YMR022W	MRP8	P35719	219 aa		3.7	□□□□□ -1.82
UBC7	YMR022W	DEF1	P35732	738 aa	Known RBP	3.7	□□□□□ -1.82
UBC7	YMR022W	YKR078W	P36158	585 aa	Known RBP	3.7	□□□□□ -1.82
UBC7	YMR022W	YER158C	P40095	573 aa		3.7	□□□□□ -1.82
UBC7	YMR022W	CHA4	P43634	648 aa		3.7	□□□□□ -1.82
UBC7	YMR022W	MTC3	P53077	123 aa		3.7	□□□□□ -1.82
UBC7	YMR022W	SNU71	P53207	620 aa	Known RBP	3.7	□□□□□ -1.82
UBC7	YMR022W	SUN4	P53616	420 aa		3.7	□□□□□ -1.82
UBC7	YMR022W	HRQ1	Q05549	1077 aa		3.7	□□□□□ -1.82
UBC7	YMR022W	YDR306C	Q06640	478 aa		3.7	□□□□□ -1.82
UBC7	YMR022W	ENB1	Q08299	606 aa		3.7	□□□□□ -1.82
UBC7	YMR022W	GUP2	Q08929	609 aa		3.7	□□□□□ -1.82
UBC7	YMR022W	PIN2	Q12057	282 aa		3.7	□□□□□ -1.82
UBC7	YMR022W	PRP9	P19736	530 aa	Known RBP	3.69	□□□□□ -1.82
UBC7	YMR022W	SED4	P25365	1065 aa		3.69	□□□□□ -1.82
UBC7	YMR022W	HRR25	P29295	494 aa	Known RBP	3.69	□□□□□ -1.82
UBC7	YMR022W	CDA1	Q06702	301 aa		3.69	□□□□□ -1.82
UBC7	YMR022W	NPC2	Q12408	173 aa		3.69	□□□□□ -1.82
UBC7	YMR022W	RFA1	P22336	621 aa	Known RBP	3.68	□□□□□ -1.82
UBC7	YMR022W	CDC48	P25694	835 aa	Known RBP	3.68	□□□□□ -1.82
UBC7	YMR022W	CDC11	P32458	415 aa		3.68	□□□□□ -1.82
UBC7	YMR022W	CDC12	P32468	407 aa	Known RBP	3.68	□□□□□ -1.82
UBC7	YMR022W	GIC1	P38785	314 aa		3.68	□□□□□ -1.82
UBC7	YMR022W	GYP7	P48365	746 aa		3.68	□□□□□ -1.82
UBC7	YMR022W	UBA2	P52488	636 aa		3.68	□□□□□ -1.82
UBC7	YMR022W	EXG2	P52911	562 aa		3.68	□□□□□ -1.82
UBC7	YMR022W	RAI1	P53063	387 aa	Known RBP	3.68	□□□□□ -1.82
UBC7	YMR022W	TIM44	Q01852	431 aa		3.68	□□□□□ -1.82
UBC7	YMR022W	VPS16	Q03308	798 aa		3.68	□□□□□ -1.82
UBC7	YMR022W	GIS1	Q03833	894 aa		3.68	□□□□□ -1.82
UBC7	YMR022W	OPI10	Q08202	246 aa		3.68	□□□□□ -1.82
UBC7	YMR022W	KCS1	Q12494	1050 aa		3.68	□□□□□ -1.82
UBC7	YMR022W	VBA5	P36172	582 aa		3.67	□□□□□ -1.82
UBC7	YMR022W	PBY1	P38254	753 aa		3.67	□□□□□ -1.82
UBC7	YMR022W	MSS4	P38994	779 aa		3.67	□□□□□ -1.82
UBC7	YMR022W	MBP1	P39678	833 aa		3.67	□□□□□ -1.82
UBC7	YMR022W	URM1	P40554	99 aa	Predicted RBP	3.67	□□□□□ -1.82
UBC7	YMR022W	CCM1	P48237	864 aa	Predicted RBP	3.67	□□□□□ -1.82
UBC7	YMR022W	IRR1	P40541	1150 aa		3.66	□□□□□ -1.82
UBC7	YMR022W	ESC2	Q06340	456 aa		3.66	□□□□□ -1.82
UBC7	YMR022W	TAD3	Q9URQ3	322 aa		3.66	□□□□□ -1.82
UBC7	YMR022W	PRI2	P20457	528 aa		3.65	□□□□□ -1.83
UBC7	YMR022W	EFT1	P32324	842 aa	Known RBP	3.65	□□□□□ -1.83
UBC7	YMR022W	YKL151C	P36059	337 aa		3.65	□□□□□ -1.83
UBC7	YMR022W	YRO2	P38079	344 aa		3.65	□□□□□ -1.83
UBC7	YMR022W	KTR4	P38131	464 aa		3.65	□□□□□ -1.83
UBC7	YMR022W	SUL1	P38359	859 aa		3.65	□□□□□ -1.83
UBC7	YMR022W	VAC8	P39968	578 aa		3.65	□□□□□ -1.83
UBC7	YMR022W	NCS6	P53088	359 aa		3.65	□□□□□ -1.83
UBC7	YMR022W	WRS1	Q12109	432 aa	Known RBP	3.65	□□□□□ -1.83
UBC7	YMR022W	NOT3	P06102	836 aa	Known RBP	3.64	□□□□□ -1.83
UBC7	YMR022W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	3.64	□□□□□ -1.83	not detected
UBC7	YMR022W	SFB2	P53953	876 aa		3.64	□□□□□ -1.83
UBC7	YMR022W	KIN4	Q01919	800 aa		3.64	□□□□□ -1.83
UBC7	YMR022W	SPO75	Q07798	868 aa		3.64	□□□□□ -1.83
UBC7	YMR022W	RPS9A	O13516	197 aa	Known RBP	3.63	□□□□□ -1.83
UBC7	YMR022W	RAD53	P22216	821 aa		3.63	□□□□□ -1.83
UBC7	YMR022W	OAR1	P35731	278 aa		3.63	□□□□□ -1.83
UBC7	YMR022W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	3.63	□□□□□ -1.83	not detected
UBC7	YMR022W	PUS2	P53167	370 aa		3.63	□□□□□ -1.83
UBC7	YMR022W	RNT1	Q02555	471 aa		3.63	□□□□□ -1.83
UBC7	YMR022W	LCD1	Q04377	747 aa		3.63	□□□□□ -1.83
UBC7	YMR022W	TDA5	Q06417	326 aa	Known RBP	3.63	□□□□□ -1.83
UBC7	YMR022W	SWM1	Q12379	170 aa		3.63	□□□□□ -1.83
UBC7	YMR022W	KAR4	P25583	335 aa		3.62	□□□□□ -1.83
UBC7	YMR022W	NGG1	P32494	702 aa		3.62	□□□□□ -1.83
UBC7	YMR022W	TYE7	P33122	291 aa	Predicted RBP	3.62	□□□□□ -1.83
UBC7	YMR022W	SIT1	P39980	628 aa		3.62	□□□□□ -1.83
UBC7	YMR022W	STU2	P46675	888 aa		3.62	□□□□□ -1.83
UBC7	YMR022W	NIT3	P49954	291 aa		3.62	□□□□□ -1.83
UBC7	YMR022W	PEX19	Q07418	342 aa		3.62	□□□□□ -1.83
UBC7	YMR022W	PPM2	Q08282	695 aa		3.62	□□□□□ -1.83
UBC7	YMR022W	TRP4	P07285	380 aa	Predicted RBP	3.61	□□□□□ -1.83
UBC7	YMR022W	MET3	P08536	511 aa		3.61	□□□□□ -1.83
UBC7	YMR022W	REC104	P33323	182 aa		3.61	□□□□□ -1.83
UBC7	YMR022W	STE13	P33894	931 aa		3.61	□□□□□ -1.83
UBC7	YMR022W	TSL1	P38427	1098 aa	Known RBP	3.61	□□□□□ -1.83
UBC7	YMR022W	CEP3	P40969	608 aa		3.61	□□□□□ -1.83
UBC7	YMR022W	OMS1	Q06668	471 aa		3.61	□□□□□ -1.83
UBC7	YMR022W	WHI4	Q07655	649 aa	Known RBP	3.61	□□□□□ -1.83
UBC7	YMR022W	UPC2	Q12151	913 aa		3.61	□□□□□ -1.83
UBC7	YMR022W	ACF2	Q12168	779 aa		3.61	□□□□□ -1.83
UBC7	YMR022W	OSH2	Q12451	1283 aa		3.61	□□□□□ -1.83
UBC7	YMR022W	ERG4	P25340	473 aa		3.6	□□□□□ -1.83
UBC7	YMR022W	MOH1	P38191	138 aa		3.6	□□□□□ -1.83
UBC7	YMR022W	CHS7	P38843	316 aa		3.6	□□□□□ -1.83
UBC7	YMR022W	YIL108W	P40483	696 aa	Known RBP	3.6	□□□□□ -1.83
UBC7	YMR022W	ALD6	P54115	500 aa	Known RBP	3.6	□□□□□ -1.83
UBC7	YMR022W	YOL073C	Q08232	322 aa		3.6	□□□□□ -1.83
UBC7	YMR022W	MCH5	Q08777	521 aa		3.6	□□□□□ -1.83
UBC7	YMR022W	YBR238C	P38330	731 aa	Known RBP	3.59	□□□□□ -1.83
UBC7	YMR022W	ALR2	P43553	858 aa		3.59	□□□□□ -1.83

Retrieved 100 of 5,963 RNA–protein pairs in 31.9 ms